EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000032281 (Gene tree)
Gene ID: 103033517
Gene Symbol: srsf9
Alias: zgc:77449
Full Name: serine/arginine-rich splicing factor 9
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7784 bases
Position: chr20:2930971-2938754
Accession: 103033517
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000032274	RRM_1	PF00076.22	1.3e-31	1	2
ENSAMXP00000032274	RRM_1	PF00076.22	1.3e-31	2	2
ENSAMXP00000047349	RRM_1	PF00076.22	2.5e-25	1	2
ENSAMXP00000047349	RRM_1	PF00076.22	2.5e-25	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000036422	-	3592	XM_007250244	ENSAMXP00000032274	242 (aa)	XP_007250306	W5LJ35
ENSAMXT00000046361	-	705	-	ENSAMXP00000047349	234 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000032281's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG
amex05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000032281's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000032281	srsf9	52	59.333	ENSAMXG00000024373	-	92	59.091
ENSAMXG00000032281	srsf9	74	44.565	ENSAMXG00000034811	srsf4	84	37.759
ENSAMXG00000032281	srsf9	74	38.144	ENSAMXG00000042692	-	99	37.241
ENSAMXG00000032281	srsf9	69	42.135	ENSAMXG00000030476	srsf5a	91	38.314
ENSAMXG00000032281	srsf9	73	68.852	ENSAMXG00000035996	srsf1a	73	68.306
ENSAMXG00000032281	srsf9	69	43.750	ENSAMXG00000011932	srsf5b	94	40.392

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000032281	srsf9	89	71.628	ENSG00000111786	SRSF9	94	70.833	Homo_sapiens
ENSAMXG00000032281	srsf9	92	89.868	ENSAPOG00000013728	srsf9	100	90.244	Acanthochromis_polyacanthus
ENSAMXG00000032281	srsf9	89	72.350	ENSAMEG00000013294	SRSF9	97	70.833	Ailuropoda_melanoleuca
ENSAMXG00000032281	srsf9	92	88.444	ENSACIG00000015765	srsf9	96	81.148	Amphilophus_citrinellus
ENSAMXG00000032281	srsf9	100	86.992	ENSAOCG00000002992	srsf9	100	88.211	Amphiprion_ocellaris
ENSAMXG00000032281	srsf9	100	86.992	ENSAPEG00000011908	srsf9	100	88.211	Amphiprion_percula
ENSAMXG00000032281	srsf9	90	87.838	ENSATEG00000019984	srsf9	100	88.664	Anabas_testudineus
ENSAMXG00000032281	srsf9	88	70.892	ENSACAG00000002877	SRSF9	86	65.741	Anolis_carolinensis
ENSAMXG00000032281	srsf9	89	71.628	ENSANAG00000035910	SRSF9	95	70.833	Aotus_nancymaae
ENSAMXG00000032281	srsf9	92	87.111	ENSACLG00000015678	srsf9	96	78.279	Astatotilapia_calliptera
ENSAMXG00000032281	srsf9	86	72.464	ENSBTAG00000005584	-	91	71.635	Bos_taurus
ENSAMXG00000032281	srsf9	89	71.163	ENSBTAG00000012792	SRSF9	94	70.370	Bos_taurus
ENSAMXG00000032281	srsf9	89	71.628	ENSCJAG00000001187	SRSF9	94	70.833	Callithrix_jacchus
ENSAMXG00000032281	srsf9	89	72.811	ENSCAFG00000010314	SRSF9	94	71.296	Canis_familiaris
ENSAMXG00000032281	srsf9	89	72.811	ENSCAFG00020020612	SRSF9	94	71.296	Canis_lupus_dingo
ENSAMXG00000032281	srsf9	89	71.163	ENSCHIG00000025274	SRSF9	94	70.370	Capra_hircus
ENSAMXG00000032281	srsf9	90	61.187	ENSTSYG00000036169	-	95	55.000	Carlito_syrichta
ENSAMXG00000032281	srsf9	90	55.708	ENSTSYG00000029305	-	94	50.909	Carlito_syrichta
ENSAMXG00000032281	srsf9	89	72.811	ENSTSYG00000006848	-	94	71.296	Carlito_syrichta
ENSAMXG00000032281	srsf9	89	62.037	ENSTSYG00000034124	-	94	61.574	Carlito_syrichta
ENSAMXG00000032281	srsf9	89	71.628	ENSCPOG00000033486	SRSF9	94	70.833	Cavia_porcellus
ENSAMXG00000032281	srsf9	89	71.628	ENSCCAG00000036053	SRSF9	94	70.833	Cebus_capucinus
ENSAMXG00000032281	srsf9	89	71.628	ENSCATG00000021315	SRSF9	94	70.833	Cercocebus_atys
ENSAMXG00000032281	srsf9	75	58.791	ENSCATG00000000421	-	88	56.284	Cercocebus_atys
ENSAMXG00000032281	srsf9	89	71.628	ENSCLAG00000012289	SRSF9	94	70.833	Chinchilla_lanigera
ENSAMXG00000032281	srsf9	89	71.628	ENSCSAG00000002257	SRSF9	94	70.833	Chlorocebus_sabaeus
ENSAMXG00000032281	srsf9	68	72.121	ENSCHOG00000009241	SRSF9	99	68.902	Choloepus_hoffmanni
ENSAMXG00000032281	srsf9	88	75.587	ENSCPBG00000011340	SRSF9	91	71.759	Chrysemys_picta_bellii
ENSAMXG00000032281	srsf9	86	70.531	ENSCANG00000034161	SRSF9	90	70.048	Colobus_angolensis_palliatus
ENSAMXG00000032281	srsf9	89	72.350	ENSCGRG00001021965	Srsf9	94	70.370	Cricetulus_griseus_chok1gshd
ENSAMXG00000032281	srsf9	100	82.143	ENSCSEG00000015663	srsf9	100	84.921	Cynoglossus_semilaevis
ENSAMXG00000032281	srsf9	100	83.607	ENSCVAG00000021417	srsf9	100	82.377	Cyprinodon_variegatus
ENSAMXG00000032281	srsf9	100	91.429	ENSDARG00000008097	srsf9	100	92.653	Danio_rerio
ENSAMXG00000032281	srsf9	89	71.628	ENSDNOG00000012598	SRSF9	94	70.833	Dasypus_novemcinctus
ENSAMXG00000032281	srsf9	89	72.350	ENSDORG00000013162	Srsf9	94	66.204	Dipodomys_ordii
ENSAMXG00000032281	srsf9	89	58.333	ENSETEG00000002606	SRSF9	95	57.277	Echinops_telfairi
ENSAMXG00000032281	srsf9	89	71.628	ENSEASG00005004727	SRSF9	94	70.833	Equus_asinus_asinus
ENSAMXG00000032281	srsf9	89	71.628	ENSECAG00000009116	SRSF9	94	70.833	Equus_caballus
ENSAMXG00000032281	srsf9	64	80.000	ENSEEUG00000011655	SRSF9	70	80.000	Erinaceus_europaeus
ENSAMXG00000032281	srsf9	100	82.329	ENSELUG00000012644	SRSF9	100	80.620	Esox_lucius
ENSAMXG00000032281	srsf9	94	84.188	ENSELUG00000021669	srsf9	100	85.944	Esox_lucius
ENSAMXG00000032281	srsf9	89	72.811	ENSFCAG00000011011	SRSF9	94	71.296	Felis_catus
ENSAMXG00000032281	srsf9	100	83.265	ENSFHEG00000020851	srsf9	100	79.592	Fundulus_heteroclitus
ENSAMXG00000032281	srsf9	100	79.134	ENSGMOG00000007980	srsf9	100	79.134	Gadus_morhua
ENSAMXG00000032281	srsf9	87	85.915	ENSGAFG00000009123	srsf9	100	83.673	Gambusia_affinis
ENSAMXG00000032281	srsf9	90	84.416	ENSGACG00000016921	srsf9	100	82.422	Gasterosteus_aculeatus
ENSAMXG00000032281	srsf9	88	75.117	ENSGAGG00000016015	SRSF9	91	71.296	Gopherus_agassizii
ENSAMXG00000032281	srsf9	85	55.288	ENSGGOG00000027142	-	95	59.135	Gorilla_gorilla
ENSAMXG00000032281	srsf9	92	87.111	ENSHBUG00000019320	srsf9	100	78.279	Haplochromis_burtoni
ENSAMXG00000032281	srsf9	79	64.737	ENSHGLG00000003582	-	91	63.542	Heterocephalus_glaber_female
ENSAMXG00000032281	srsf9	89	71.628	ENSHGLG00000014372	SRSF9	94	70.833	Heterocephalus_glaber_female
ENSAMXG00000032281	srsf9	89	71.628	ENSHGLG00100013695	SRSF9	94	70.833	Heterocephalus_glaber_male
ENSAMXG00000032281	srsf9	79	64.737	ENSHGLG00100015198	-	89	64.211	Heterocephalus_glaber_male
ENSAMXG00000032281	srsf9	100	65.613	ENSHCOG00000017311	srsf9	100	63.095	Hippocampus_comes
ENSAMXG00000032281	srsf9	100	96.281	ENSIPUG00000005511	srsf9	100	96.281	Ictalurus_punctatus
ENSAMXG00000032281	srsf9	89	71.628	ENSSTOG00000007344	SRSF9	94	70.833	Ictidomys_tridecemlineatus
ENSAMXG00000032281	srsf9	89	71.759	ENSJJAG00000013374	Srsf9	94	66.204	Jaculus_jaculus
ENSAMXG00000032281	srsf9	90	82.432	ENSKMAG00000007113	srsf9	100	77.328	Kryptolebias_marmoratus
ENSAMXG00000032281	srsf9	100	76.735	ENSLBEG00000017430	srsf9	96	79.675	Labrus_bergylta
ENSAMXG00000032281	srsf9	89	72.222	ENSLACG00000018228	SRSF9	95	70.507	Latimeria_chalumnae
ENSAMXG00000032281	srsf9	100	91.429	ENSLOCG00000004044	srsf9	98	90.612	Lepisosteus_oculatus
ENSAMXG00000032281	srsf9	74	69.663	ENSLAFG00000006381	SRSF9	97	69.101	Loxodonta_africana
ENSAMXG00000032281	srsf9	80	70.466	ENSMFAG00000039423	SRSF9	99	69.948	Macaca_fascicularis
ENSAMXG00000032281	srsf9	88	69.014	ENSMMUG00000016494	SRSF9	69	69.268	Macaca_mulatta
ENSAMXG00000032281	srsf9	75	60.440	ENSMMUG00000040941	-	86	58.470	Macaca_mulatta
ENSAMXG00000032281	srsf9	89	71.628	ENSMNEG00000044129	SRSF9	94	70.833	Macaca_nemestrina
ENSAMXG00000032281	srsf9	88	71.495	ENSMLEG00000041155	SRSF9	99	71.028	Mandrillus_leucophaeus
ENSAMXG00000032281	srsf9	90	90.000	ENSMAMG00000011581	srsf9	100	90.574	Mastacembelus_armatus
ENSAMXG00000032281	srsf9	92	87.111	ENSMZEG00005018422	srsf9	96	78.279	Maylandia_zebra
ENSAMXG00000032281	srsf9	89	71.889	ENSMAUG00000011403	Srsf9	94	69.907	Mesocricetus_auratus
ENSAMXG00000032281	srsf9	89	71.163	ENSMICG00000008674	SRSF9	94	70.370	Microcebus_murinus
ENSAMXG00000032281	srsf9	84	73.659	ENSMOCG00000021163	Srsf9	91	71.154	Microtus_ochrogaster
ENSAMXG00000032281	srsf9	90	87.556	ENSMMOG00000009349	srsf9	95	86.800	Mola_mola
ENSAMXG00000032281	srsf9	88	70.892	ENSMODG00000003146	SRSF9	94	70.892	Monodelphis_domestica
ENSAMXG00000032281	srsf9	90	88.128	ENSMALG00000011678	srsf9	100	87.755	Monopterus_albus
ENSAMXG00000032281	srsf9	89	72.811	MGP_CAROLIEiJ_G0027622	Srsf9	94	70.370	Mus_caroli
ENSAMXG00000032281	srsf9	89	72.811	ENSMUSG00000029538	Srsf9	94	70.370	Mus_musculus
ENSAMXG00000032281	srsf9	89	72.811	MGP_SPRETEiJ_G0028620	Srsf9	94	70.370	Mus_spretus
ENSAMXG00000032281	srsf9	89	72.146	ENSMPUG00000003193	SRSF9	94	70.642	Mustela_putorius_furo
ENSAMXG00000032281	srsf9	89	70.507	ENSMLUG00000010346	SRSF9	94	69.725	Myotis_lucifugus
ENSAMXG00000032281	srsf9	89	72.350	ENSNGAG00000012738	Srsf9	94	69.907	Nannospalax_galili
ENSAMXG00000032281	srsf9	92	87.111	ENSNBRG00000003888	srsf9	100	78.279	Neolamprologus_brichardi
ENSAMXG00000032281	srsf9	89	71.628	ENSNLEG00000015661	SRSF9	94	70.833	Nomascus_leucogenys
ENSAMXG00000032281	srsf9	83	64.179	ENSNLEG00000033316	-	95	55.285	Nomascus_leucogenys
ENSAMXG00000032281	srsf9	62	75.333	ENSMEUG00000004069	SRSF9	91	76.000	Notamacropus_eugenii
ENSAMXG00000032281	srsf9	89	72.350	ENSOPRG00000004234	SRSF9	94	66.204	Ochotona_princeps
ENSAMXG00000032281	srsf9	94	87.391	ENSONIG00000013974	srsf9	100	78.279	Oreochromis_niloticus
ENSAMXG00000032281	srsf9	89	71.163	ENSOCUG00000024603	SRSF9	94	70.370	Oryctolagus_cuniculus
ENSAMXG00000032281	srsf9	100	82.377	ENSORLG00000023709	srsf9	100	85.246	Oryzias_latipes
ENSAMXG00000032281	srsf9	100	82.377	ENSORLG00020017678	srsf9	100	85.246	Oryzias_latipes_hni
ENSAMXG00000032281	srsf9	100	82.377	ENSORLG00015004857	srsf9	100	85.246	Oryzias_latipes_hsok
ENSAMXG00000032281	srsf9	100	81.967	ENSOMEG00000002601	srsf9	100	84.426	Oryzias_melastigma
ENSAMXG00000032281	srsf9	89	71.628	ENSOGAG00000003852	SRSF9	94	70.833	Otolemur_garnettii
ENSAMXG00000032281	srsf9	86	71.498	ENSOARG00000012402	SRSF9	94	63.594	Ovis_aries
ENSAMXG00000032281	srsf9	86	70.673	ENSPPAG00000034420	SRSF9	85	70.192	Pan_paniscus
ENSAMXG00000032281	srsf9	89	72.811	ENSPPRG00000001309	SRSF9	94	71.296	Panthera_pardus
ENSAMXG00000032281	srsf9	68	71.515	ENSPTIG00000010327	SRSF9	71	69.512	Panthera_tigris_altaica
ENSAMXG00000032281	srsf9	89	71.628	ENSPTRG00000005535	SRSF9	94	70.833	Pan_troglodytes
ENSAMXG00000032281	srsf9	89	71.628	ENSPANG00000016072	SRSF9	94	70.833	Papio_anubis
ENSAMXG00000032281	srsf9	86	93.750	ENSPKIG00000024851	SRSF9	96	87.398	Paramormyrops_kingsleyae
ENSAMXG00000032281	srsf9	100	85.772	ENSPKIG00000023787	srsf9	100	89.024	Paramormyrops_kingsleyae
ENSAMXG00000032281	srsf9	100	72.619	ENSPMGG00000016215	srsf9	100	72.222	Periophthalmus_magnuspinnatus
ENSAMXG00000032281	srsf9	86	73.206	ENSPEMG00000016311	Srsf9	91	70.673	Peromyscus_maniculatus_bairdii
ENSAMXG00000032281	srsf9	88	72.770	ENSPCIG00000025998	SRSF9	85	71.831	Phascolarctos_cinereus
ENSAMXG00000032281	srsf9	86	84.186	ENSPFOG00000019792	srsf9	100	81.673	Poecilia_formosa
ENSAMXG00000032281	srsf9	86	84.762	ENSPLAG00000022740	srsf9	100	82.927	Poecilia_latipinna
ENSAMXG00000032281	srsf9	86	83.721	ENSPMEG00000008809	srsf9	100	81.275	Poecilia_mexicana
ENSAMXG00000032281	srsf9	86	82.243	ENSPREG00000013165	srsf9	97	81.600	Poecilia_reticulata
ENSAMXG00000032281	srsf9	89	68.837	ENSPPYG00000029896	-	94	68.056	Pongo_abelii
ENSAMXG00000032281	srsf9	87	70.476	ENSPPYG00000019910	-	91	70.673	Pongo_abelii
ENSAMXG00000032281	srsf9	89	71.628	ENSPPYG00000005031	-	94	70.833	Pongo_abelii
ENSAMXG00000032281	srsf9	68	68.902	ENSPCAG00000013889	SRSF9	99	68.293	Procavia_capensis
ENSAMXG00000032281	srsf9	89	71.163	ENSPCOG00000015115	SRSF9	94	70.370	Propithecus_coquereli
ENSAMXG00000032281	srsf9	89	71.628	ENSPVAG00000002229	SRSF9	94	70.833	Pteropus_vampyrus
ENSAMXG00000032281	srsf9	92	87.111	ENSPNYG00000008644	srsf9	100	78.279	Pundamilia_nyererei
ENSAMXG00000032281	srsf9	100	97.119	ENSPNAG00000003588	srsf9	100	97.119	Pygocentrus_nattereri
ENSAMXG00000032281	srsf9	89	68.203	ENSRNOG00000001163	Srsf9	94	70.370	Rattus_norvegicus
ENSAMXG00000032281	srsf9	68	69.512	ENSRBIG00000042683	SRSF9	81	69.872	Rhinopithecus_bieti
ENSAMXG00000032281	srsf9	69	69.880	ENSRROG00000041980	SRSF9	96	64.171	Rhinopithecus_roxellana
ENSAMXG00000032281	srsf9	67	67.273	ENSSHAG00000005685	SRSF9	94	67.925	Sarcophilus_harrisii
ENSAMXG00000032281	srsf9	100	86.179	ENSSFOG00015017303	srsf9	100	89.431	Scleropages_formosus
ENSAMXG00000032281	srsf9	100	88.618	ENSSFOG00015002476	SRSF9	100	85.772	Scleropages_formosus
ENSAMXG00000032281	srsf9	87	85.915	ENSSMAG00000002039	srsf9	88	71.488	Scophthalmus_maximus
ENSAMXG00000032281	srsf9	90	88.393	ENSSDUG00000018908	srsf9	100	89.558	Seriola_dumerili
ENSAMXG00000032281	srsf9	90	88.393	ENSSLDG00000012305	srsf9	100	89.558	Seriola_lalandi_dorsalis
ENSAMXG00000032281	srsf9	68	71.515	ENSSARG00000003434	SRSF9	96	69.811	Sorex_araneus
ENSAMXG00000032281	srsf9	88	75.000	ENSSPUG00000015680	SRSF9	90	67.593	Sphenodon_punctatus
ENSAMXG00000032281	srsf9	100	85.484	ENSSPAG00000006285	srsf9	100	87.550	Stegastes_partitus
ENSAMXG00000032281	srsf9	89	71.628	ENSSSCG00000009906	SRSF9	94	70.833	Sus_scrofa
ENSAMXG00000032281	srsf9	68	60.606	ENSSSCG00000038585	-	89	58.788	Sus_scrofa
ENSAMXG00000032281	srsf9	100	65.462	ENSTRUG00000012723	srsf9	100	63.855	Takifugu_rubripes
ENSAMXG00000032281	srsf9	94	81.277	ENSTNIG00000000697	srsf9	95	81.277	Tetraodon_nigroviridis
ENSAMXG00000032281	srsf9	84	70.098	ENSTBEG00000008499	SRSF9	99	69.608	Tupaia_belangeri
ENSAMXG00000032281	srsf9	84	70.936	ENSTTRG00000000145	SRSF9	99	70.443	Tursiops_truncatus
ENSAMXG00000032281	srsf9	89	71.628	ENSUAMG00000015527	SRSF9	94	70.833	Ursus_americanus
ENSAMXG00000032281	srsf9	73	64.481	ENSUMAG00000006151	SRSF9	81	60.526	Ursus_maritimus
ENSAMXG00000032281	srsf9	79	46.073	ENSVPAG00000010361	SRSF9	95	45.355	Vicugna_pacos
ENSAMXG00000032281	srsf9	89	72.811	ENSVVUG00000021065	SRSF9	94	71.296	Vulpes_vulpes
ENSAMXG00000032281	srsf9	89	63.594	ENSXETG00000026940	srsf9	93	61.927	Xenopus_tropicalis
ENSAMXG00000032281	srsf9	87	85.849	ENSXMAG00000001438	srsf9	100	83.673	Xiphophorus_maculatus