EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000032428 (Gene tree)
Gene ID: 111194520
Gene Symbol: sf3a2
Alias: zgc:56097|zgc:77448
Full Name: splicing factor 3a subunit 2
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 12275 bases
Position: chr17:9816861-9829135
Accession: 111194520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029955	zf-met	PF12874.7	5.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000045853	-	5856	XM_022678869	ENSAMXP00000029955	302 (aa)	XP_022534590	UPI000BBDBFE6

Gene Model

Click here to download ENSAMXG00000032428's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000032428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000032428	sf3a2	74	94.144	ENSG00000104897	SF3A2	100	97.037	Homo_sapiens
ENSAMXG00000032428	sf3a2	80	94.650	ENSAPOG00000003916	sf3a2	83	93.522	Acanthochromis_polyacanthus
ENSAMXG00000032428	sf3a2	72	95.833	ENSAMEG00000005469	SF3A2	53	91.429	Ailuropoda_melanoleuca
ENSAMXG00000032428	sf3a2	79	94.142	ENSACIG00000018153	sf3a2	81	94.142	Amphilophus_citrinellus
ENSAMXG00000032428	sf3a2	80	94.650	ENSAOCG00000015960	sf3a2	82	94.672	Amphiprion_ocellaris
ENSAMXG00000032428	sf3a2	80	94.650	ENSAPEG00000012336	sf3a2	82	94.672	Amphiprion_percula
ENSAMXG00000032428	sf3a2	80	94.650	ENSATEG00000015449	sf3a2	83	93.522	Anabas_testudineus
ENSAMXG00000032428	sf3a2	61	95.676	ENSANAG00000034031	-	89	95.676	Aotus_nancymaae
ENSAMXG00000032428	sf3a2	85	90.272	ENSACLG00000002356	sf3a2	81	93.724	Astatotilapia_calliptera
ENSAMXG00000032428	sf3a2	72	95.833	ENSBTAG00000025452	SF3A2	51	91.429	Bos_taurus
ENSAMXG00000032428	sf3a2	73	79.638	WBGene00008683	repo-1	99	79.638	Caenorhabditis_elegans
ENSAMXG00000032428	sf3a2	72	95.833	ENSCJAG00000013206	-	53	91.429	Callithrix_jacchus
ENSAMXG00000032428	sf3a2	74	94.144	ENSCAFG00000019414	SF3A2	51	91.429	Canis_familiaris
ENSAMXG00000032428	sf3a2	74	94.144	ENSCAFG00020018153	SF3A2	51	91.429	Canis_lupus_dingo
ENSAMXG00000032428	sf3a2	72	95.833	ENSCHIG00000018323	SF3A2	51	91.429	Capra_hircus
ENSAMXG00000032428	sf3a2	60	96.703	ENSCAPG00000003402	-	90	96.703	Cavia_aperea
ENSAMXG00000032428	sf3a2	72	95.833	ENSCPOG00000032868	SF3A2	54	91.429	Cavia_porcellus
ENSAMXG00000032428	sf3a2	72	95.833	ENSCCAG00000009812	SF3A2	87	96.216	Cebus_capucinus
ENSAMXG00000032428	sf3a2	74	94.144	ENSCATG00000038453	SF3A2	53	91.429	Cercocebus_atys
ENSAMXG00000032428	sf3a2	72	95.833	ENSCLAG00000008987	SF3A2	54	91.429	Chinchilla_lanigera
ENSAMXG00000032428	sf3a2	74	94.144	ENSCSAG00000011717	SF3A2	52	91.429	Chlorocebus_sabaeus
ENSAMXG00000032428	sf3a2	80	86.220	ENSCPBG00000018569	SF3A2	97	79.672	Chrysemys_picta_bellii
ENSAMXG00000032428	sf3a2	79	79.498	ENSCING00000003319	zf(matrin)-2	64	79.832	Ciona_intestinalis
ENSAMXG00000032428	sf3a2	79	78.571	ENSCSAVG00000007862	-	64	78.243	Ciona_savignyi
ENSAMXG00000032428	sf3a2	74	94.144	ENSCANG00000024451	SF3A2	53	91.429	Colobus_angolensis_palliatus
ENSAMXG00000032428	sf3a2	74	94.144	ENSCGRG00001001802	Sf3a2	51	91.429	Cricetulus_griseus_chok1gshd
ENSAMXG00000032428	sf3a2	74	94.144	ENSCGRG00000011089	Sf3a2	94	96.703	Cricetulus_griseus_crigri
ENSAMXG00000032428	sf3a2	87	88.593	ENSCSEG00000014308	sf3a2	84	92.887	Cynoglossus_semilaevis
ENSAMXG00000032428	sf3a2	80	91.770	ENSCVAG00000021349	sf3a2	83	91.803	Cyprinodon_variegatus
ENSAMXG00000032428	sf3a2	80	94.650	ENSDARG00000021107	sf3a2	100	84.797	Danio_rerio
ENSAMXG00000032428	sf3a2	72	95.370	ENSDORG00000014445	Sf3a2	53	91.020	Dipodomys_ordii
ENSAMXG00000032428	sf3a2	71	84.722	FBgn0036314	Sf3a2	88	78.689	Drosophila_melanogaster
ENSAMXG00000032428	sf3a2	72	95.833	ENSEASG00005021972	SF3A2	53	91.429	Equus_asinus_asinus
ENSAMXG00000032428	sf3a2	100	84.142	ENSELUG00000008471	sf3a2	99	84.142	Esox_lucius
ENSAMXG00000032428	sf3a2	72	95.370	ENSFCAG00000030476	SF3A2	56	91.020	Felis_catus
ENSAMXG00000032428	sf3a2	62	96.791	ENSFALG00000013785	-	71	78.229	Ficedula_albicollis
ENSAMXG00000032428	sf3a2	60	96.703	ENSFDAG00000020911	-	93	96.703	Fukomys_damarensis
ENSAMXG00000032428	sf3a2	80	92.946	ENSFHEG00000002392	sf3a2	84	91.903	Fundulus_heteroclitus
ENSAMXG00000032428	sf3a2	80	93.776	ENSGMOG00000012186	sf3a2	82	93.117	Gadus_morhua
ENSAMXG00000032428	sf3a2	72	96.759	ENSGALG00000021679	SF3A2	97	82.237	Gallus_gallus
ENSAMXG00000032428	sf3a2	80	92.946	ENSGAFG00000008478	sf3a2	84	91.903	Gambusia_affinis
ENSAMXG00000032428	sf3a2	82	93.145	ENSGACG00000015255	sf3a2	84	94.286	Gasterosteus_aculeatus
ENSAMXG00000032428	sf3a2	65	84.135	ENSGAGG00000008500	SF3A2	96	77.606	Gopherus_agassizii
ENSAMXG00000032428	sf3a2	74	94.144	ENSGGOG00000006613	SF3A2	53	91.429	Gorilla_gorilla
ENSAMXG00000032428	sf3a2	85	90.272	ENSHBUG00000021796	sf3a2	81	93.724	Haplochromis_burtoni
ENSAMXG00000032428	sf3a2	72	95.833	ENSHGLG00000015102	SF3A2	88	96.721	Heterocephalus_glaber_female
ENSAMXG00000032428	sf3a2	72	95.833	ENSHGLG00100000418	SF3A2	88	96.721	Heterocephalus_glaber_male
ENSAMXG00000032428	sf3a2	86	90.114	ENSHCOG00000001223	sf3a2	84	92.308	Hippocampus_comes
ENSAMXG00000032428	sf3a2	100	89.073	ENSIPUG00000019071	sf3a2	100	88.742	Ictalurus_punctatus
ENSAMXG00000032428	sf3a2	72	95.833	ENSSTOG00000007495	SF3A2	90	89.071	Ictidomys_tridecemlineatus
ENSAMXG00000032428	sf3a2	72	95.833	ENSJJAG00000010635	Sf3a2	96	95.676	Jaculus_jaculus
ENSAMXG00000032428	sf3a2	82	89.157	ENSKMAG00000006295	sf3a2	83	89.879	Kryptolebias_marmoratus
ENSAMXG00000032428	sf3a2	85	92.996	ENSLBEG00000000677	sf3a2	83	93.927	Labrus_bergylta
ENSAMXG00000032428	sf3a2	72	96.296	ENSLACG00000008744	SF3A2	98	81.169	Latimeria_chalumnae
ENSAMXG00000032428	sf3a2	77	95.259	ENSLOCG00000005835	sf3a2	99	86.645	Lepisosteus_oculatus
ENSAMXG00000032428	sf3a2	74	94.144	ENSMFAG00000002638	SF3A2	53	91.429	Macaca_fascicularis
ENSAMXG00000032428	sf3a2	74	94.144	ENSMMUG00000010111	SF3A2	53	91.429	Macaca_mulatta
ENSAMXG00000032428	sf3a2	74	94.144	ENSMNEG00000036916	SF3A2	52	91.429	Macaca_nemestrina
ENSAMXG00000032428	sf3a2	80	93.827	ENSMAMG00000009881	sf3a2	83	92.713	Mastacembelus_armatus
ENSAMXG00000032428	sf3a2	85	90.272	ENSMZEG00005025609	sf3a2	81	93.724	Maylandia_zebra
ENSAMXG00000032428	sf3a2	72	96.759	ENSMGAG00000001950	SF3A2	97	82.237	Meleagris_gallopavo
ENSAMXG00000032428	sf3a2	60	96.703	ENSMAUG00000005644	-	94	96.703	Mesocricetus_auratus
ENSAMXG00000032428	sf3a2	72	95.833	ENSMICG00000015443	SF3A2	53	91.429	Microcebus_murinus
ENSAMXG00000032428	sf3a2	72	95.833	ENSMOCG00000007216	Sf3a2	53	91.429	Microtus_ochrogaster
ENSAMXG00000032428	sf3a2	82	83.936	ENSMMOG00000010657	sf3a2	88	84.959	Mola_mola
ENSAMXG00000032428	sf3a2	72	95.370	ENSMODG00000004681	SF3A2	50	90.612	Monodelphis_domestica
ENSAMXG00000032428	sf3a2	80	94.650	ENSMALG00000020442	sf3a2	83	93.927	Monopterus_albus
ENSAMXG00000032428	sf3a2	74	94.144	MGP_CAROLIEiJ_G0015602	-	94	96.703	Mus_caroli
ENSAMXG00000032428	sf3a2	74	94.144	ENSMUSG00000020211	Sf3a2	94	96.703	Mus_musculus
ENSAMXG00000032428	sf3a2	74	94.144	MGP_PahariEiJ_G0031015	-	94	96.703	Mus_pahari
ENSAMXG00000032428	sf3a2	74	94.144	MGP_SPRETEiJ_G0016420	-	94	96.703	Mus_spretus
ENSAMXG00000032428	sf3a2	72	95.370	ENSMPUG00000006956	SF3A2	53	91.020	Mustela_putorius_furo
ENSAMXG00000032428	sf3a2	72	95.370	ENSMLUG00000004426	-	55	91.020	Myotis_lucifugus
ENSAMXG00000032428	sf3a2	60	96.154	ENSNGAG00000023309	-	94	96.154	Nannospalax_galili
ENSAMXG00000032428	sf3a2	81	91.870	ENSNBRG00000019872	sf3a2	81	93.724	Neolamprologus_brichardi
ENSAMXG00000032428	sf3a2	62	94.652	ENSODEG00000013722	-	100	94.652	Octodon_degus
ENSAMXG00000032428	sf3a2	81	92.276	ENSONIG00000010198	sf3a2	81	94.142	Oreochromis_niloticus
ENSAMXG00000032428	sf3a2	68	94.634	ENSOANG00000013649	-	98	94.175	Ornithorhynchus_anatinus
ENSAMXG00000032428	sf3a2	88	86.891	ENSORLG00000015301	sf3a2	82	92.469	Oryzias_latipes
ENSAMXG00000032428	sf3a2	88	86.891	ENSORLG00020017235	sf3a2	82	92.469	Oryzias_latipes_hni
ENSAMXG00000032428	sf3a2	79	92.469	ENSORLG00015017116	sf3a2	82	92.469	Oryzias_latipes_hsok
ENSAMXG00000032428	sf3a2	79	92.887	ENSOMEG00000020860	sf3a2	82	92.887	Oryzias_melastigma
ENSAMXG00000032428	sf3a2	72	95.833	ENSOGAG00000033389	SF3A2	53	91.429	Otolemur_garnettii
ENSAMXG00000032428	sf3a2	72	95.833	ENSOARG00000014357	SF3A2	60	91.429	Ovis_aries
ENSAMXG00000032428	sf3a2	72	79.630	ENSPPAG00000037864	-	52	77.143	Pan_paniscus
ENSAMXG00000032428	sf3a2	72	95.370	ENSPPRG00000007798	SF3A2	52	91.020	Panthera_pardus
ENSAMXG00000032428	sf3a2	74	94.144	ENSPTRG00000010227	SF3A2	53	91.429	Pan_troglodytes
ENSAMXG00000032428	sf3a2	74	94.144	ENSPANG00000007949	SF3A2	53	91.429	Papio_anubis
ENSAMXG00000032428	sf3a2	80	95.473	ENSPKIG00000009487	sf3a2	98	84.244	Paramormyrops_kingsleyae
ENSAMXG00000032428	sf3a2	72	94.954	ENSPSIG00000010839	SF3A2	97	79.153	Pelodiscus_sinensis
ENSAMXG00000032428	sf3a2	72	96.759	ENSPMGG00000017249	sf3a2	83	93.724	Periophthalmus_magnuspinnatus
ENSAMXG00000032428	sf3a2	72	95.833	ENSPEMG00000021288	Sf3a2	53	91.429	Peromyscus_maniculatus_bairdii
ENSAMXG00000032428	sf3a2	80	93.827	ENSPFOG00000015945	sf3a2	83	93.827	Poecilia_formosa
ENSAMXG00000032428	sf3a2	80	93.416	ENSPLAG00000010052	sf3a2	83	93.416	Poecilia_latipinna
ENSAMXG00000032428	sf3a2	80	93.827	ENSPMEG00000000184	sf3a2	83	93.827	Poecilia_mexicana
ENSAMXG00000032428	sf3a2	80	93.416	ENSPREG00000017808	sf3a2	83	93.416	Poecilia_reticulata
ENSAMXG00000032428	sf3a2	72	95.833	ENSPPYG00000009342	SF3A2	54	91.429	Pongo_abelii
ENSAMXG00000032428	sf3a2	65	94.898	ENSPCAG00000014513	SF3A2	53	82.041	Procavia_capensis
ENSAMXG00000032428	sf3a2	72	95.833	ENSPCOG00000020295	SF3A2	55	91.429	Propithecus_coquereli
ENSAMXG00000032428	sf3a2	85	90.272	ENSPNYG00000006928	sf3a2	81	93.724	Pundamilia_nyererei
ENSAMXG00000032428	sf3a2	100	90.397	ENSPNAG00000027582	sf3a2	99	91.391	Pygocentrus_nattereri
ENSAMXG00000032428	sf3a2	74	93.694	ENSRNOG00000019349	Sf3a2	52	91.020	Rattus_norvegicus
ENSAMXG00000032428	sf3a2	74	94.144	ENSRBIG00000026709	SF3A2	54	91.429	Rhinopithecus_bieti
ENSAMXG00000032428	sf3a2	74	94.144	ENSRROG00000034440	SF3A2	52	91.429	Rhinopithecus_roxellana
ENSAMXG00000032428	sf3a2	64	85.417	ENSSHAG00000011646	-	79	81.448	Sarcophilus_harrisii
ENSAMXG00000032428	sf3a2	81	88.980	ENSSHAG00000011677	-	99	90.612	Sarcophilus_harrisii
ENSAMXG00000032428	sf3a2	85	92.636	ENSSFOG00015010920	sf3a2	86	84.768	Scleropages_formosus
ENSAMXG00000032428	sf3a2	80	93.388	ENSSMAG00000002629	sf3a2	83	94.142	Scophthalmus_maximus
ENSAMXG00000032428	sf3a2	80	95.473	ENSSDUG00000015810	sf3a2	83	95.473	Seriola_dumerili
ENSAMXG00000032428	sf3a2	80	95.473	ENSSLDG00000010874	sf3a2	83	95.473	Seriola_lalandi_dorsalis
ENSAMXG00000032428	sf3a2	80	93.827	ENSSPAG00000004960	sf3a2	83	92.713	Stegastes_partitus
ENSAMXG00000032428	sf3a2	72	95.370	ENSSSCG00000039757	SF3A2	53	91.020	Sus_scrofa
ENSAMXG00000032428	sf3a2	68	96.585	ENSTGUG00000000305	SF3A2	100	96.585	Taeniopygia_guttata
ENSAMXG00000032428	sf3a2	79	93.333	ENSTRUG00000009045	sf3a2	85	91.498	Takifugu_rubripes
ENSAMXG00000032428	sf3a2	79	92.917	ENSTNIG00000015318	sf3a2	85	91.093	Tetraodon_nigroviridis
ENSAMXG00000032428	sf3a2	72	78.704	ENSTTRG00000010177	-	53	76.327	Tursiops_truncatus
ENSAMXG00000032428	sf3a2	74	94.144	ENSVVUG00000002578	SF3A2	51	91.429	Vulpes_vulpes
ENSAMXG00000032428	sf3a2	80	90.574	ENSXETG00000024943	sf3a2	74	79.085	Xenopus_tropicalis
ENSAMXG00000032428	sf3a2	80	93.361	ENSXCOG00000008222	sf3a2	84	92.308	Xiphophorus_couchianus
ENSAMXG00000032428	sf3a2	80	93.361	ENSXMAG00000029068	sf3a2	84	92.308	Xiphophorus_maculatus