EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000032446 (Gene tree)
Gene ID: 103029919
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 3-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4461 bases
Position: chr22:27300357-27304817
Accession: 103029919
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045025	zf-C2H2	PF00096.26	1.3e-13	1	2
ENSAMXP00000045025	zf-C2H2	PF00096.26	1.3e-13	2	2
ENSAMXP00000045025	zf-met	PF12874.7	1.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042679	-	3293	XM_015605469	ENSAMXP00000045025	303 (aa)	XP_015460955	UPI000BBDB345

Gene Model

Click here to download ENSAMXG00000032446's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000032446's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000032446	-	62	45.000	ENSAMXG00000035286	si:ch1073-224n8.1	76	45.000
ENSAMXG00000032446	-	54	44.545	ENSAMXG00000033201	-	89	44.545
ENSAMXG00000032446	-	50	36.709	ENSAMXG00000033001	-	50	43.119
ENSAMXG00000032446	-	55	40.909	ENSAMXG00000042174	-	90	47.273
ENSAMXG00000032446	-	51	44.545	ENSAMXG00000029783	-	92	44.545
ENSAMXG00000032446	-	97	39.773	ENSAMXG00000007441	-	96	39.773
ENSAMXG00000032446	-	77	46.429	ENSAMXG00000034096	-	75	46.429
ENSAMXG00000032446	-	53	41.284	ENSAMXG00000033299	-	75	41.284
ENSAMXG00000032446	-	52	45.455	ENSAMXG00000037143	-	93	45.045
ENSAMXG00000032446	-	92	34.688	ENSAMXG00000035090	-	96	36.709

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000032446	-	81	38.614	ENSAMEG00000003802	-	100	40.000	Ailuropoda_melanoleuca
ENSAMXG00000032446	-	57	51.351	ENSACIG00000017050	-	99	51.351	Amphilophus_citrinellus
ENSAMXG00000032446	-	93	41.667	ENSATEG00000008771	-	90	41.818	Anabas_testudineus
ENSAMXG00000032446	-	97	38.806	ENSATEG00000011221	-	68	49.351	Anabas_testudineus
ENSAMXG00000032446	-	52	49.038	ENSACLG00000028002	-	80	49.038	Astatotilapia_calliptera
ENSAMXG00000032446	-	59	47.706	ENSACLG00000015816	-	93	47.706	Astatotilapia_calliptera
ENSAMXG00000032446	-	62	47.573	ENSACLG00000011237	-	99	47.573	Astatotilapia_calliptera
ENSAMXG00000032446	-	54	50.649	ENSCSEG00000003757	-	95	50.649	Cynoglossus_semilaevis
ENSAMXG00000032446	-	71	49.558	ENSCSEG00000008510	-	68	50.000	Cynoglossus_semilaevis
ENSAMXG00000032446	-	52	38.462	ENSCVAG00000007073	-	76	43.363	Cyprinodon_variegatus
ENSAMXG00000032446	-	93	44.037	ENSEBUG00000006080	-	83	44.037	Eptatretus_burgeri
ENSAMXG00000032446	-	53	41.748	ENSEBUG00000008107	-	87	41.748	Eptatretus_burgeri
ENSAMXG00000032446	-	53	45.045	ENSELUG00000012597	-	99	46.875	Esox_lucius
ENSAMXG00000032446	-	99	45.536	ENSELUG00000001968	-	67	46.789	Esox_lucius
ENSAMXG00000032446	-	53	45.946	ENSELUG00000013094	-	98	45.946	Esox_lucius
ENSAMXG00000032446	-	50	44.248	ENSELUG00000013321	-	68	49.367	Esox_lucius
ENSAMXG00000032446	-	57	47.945	ENSELUG00000013245	-	80	47.945	Esox_lucius
ENSAMXG00000032446	-	60	44.545	ENSELUG00000016397	-	51	42.727	Esox_lucius
ENSAMXG00000032446	-	99	44.231	ENSELUG00000005912	-	87	42.857	Esox_lucius
ENSAMXG00000032446	-	51	45.783	ENSHBUG00000002961	-	96	45.783	Haplochromis_burtoni
ENSAMXG00000032446	-	92	42.105	ENSHCOG00000001942	-	99	42.105	Hippocampus_comes
ENSAMXG00000032446	-	97	39.823	ENSHCOG00000008234	-	91	41.284	Hippocampus_comes
ENSAMXG00000032446	-	84	44.348	ENSHCOG00000001638	-	68	45.133	Hippocampus_comes
ENSAMXG00000032446	-	91	45.192	ENSIPUG00000023635	-	94	45.455	Ictalurus_punctatus
ENSAMXG00000032446	-	92	43.878	ENSIPUG00000024008	-	50	55.238	Ictalurus_punctatus
ENSAMXG00000032446	-	50	46.364	ENSIPUG00000023688	-	96	45.946	Ictalurus_punctatus
ENSAMXG00000032446	-	56	40.000	ENSMALG00000008786	-	91	40.000	Monopterus_albus
ENSAMXG00000032446	-	70	44.643	ENSMALG00000012043	-	94	44.330	Monopterus_albus
ENSAMXG00000032446	-	50	45.631	ENSONIG00000017387	-	95	43.651	Oreochromis_niloticus
ENSAMXG00000032446	-	58	45.946	ENSONIG00000015502	-	99	45.946	Oreochromis_niloticus
ENSAMXG00000032446	-	98	40.000	ENSONIG00000016734	-	98	45.000	Oreochromis_niloticus
ENSAMXG00000032446	-	50	44.000	ENSONIG00000015513	-	98	44.000	Oreochromis_niloticus
ENSAMXG00000032446	-	56	43.038	ENSORLG00000023197	-	50	43.038	Oryzias_latipes
ENSAMXG00000032446	-	77	43.802	ENSORLG00000024174	-	73	50.000	Oryzias_latipes
ENSAMXG00000032446	-	52	49.057	ENSORLG00020009180	-	87	49.057	Oryzias_latipes_hni
ENSAMXG00000032446	-	57	48.077	ENSORLG00015008496	-	98	42.537	Oryzias_latipes_hsok
ENSAMXG00000032446	-	67	52.500	ENSPSIG00000000760	-	75	52.500	Pelodiscus_sinensis
ENSAMXG00000032446	-	59	40.876	ENSPMGG00000001543	-	94	41.985	Periophthalmus_magnuspinnatus
ENSAMXG00000032446	-	50	46.392	ENSPLAG00000006828	-	97	46.392	Poecilia_latipinna
ENSAMXG00000032446	-	50	50.633	ENSPMEG00000010618	-	77	45.570	Poecilia_mexicana
ENSAMXG00000032446	-	92	30.714	ENSPNYG00000000700	-	98	30.142	Pundamilia_nyererei
ENSAMXG00000032446	-	94	37.188	ENSPNAG00000011679	-	97	34.568	Pygocentrus_nattereri
ENSAMXG00000032446	-	56	47.273	ENSPNAG00000005857	-	87	47.273	Pygocentrus_nattereri
ENSAMXG00000032446	-	51	48.544	ENSRNOG00000024056	Zfp17	74	48.544	Rattus_norvegicus
ENSAMXG00000032446	-	52	49.057	ENSSMAG00000009609	-	92	46.154	Scophthalmus_maximus
ENSAMXG00000032446	-	61	40.984	ENSSDUG00000015622	-	73	45.133	Seriola_dumerili
ENSAMXG00000032446	-	61	42.982	ENSSDUG00000007336	-	88	47.115	Seriola_dumerili
ENSAMXG00000032446	-	61	45.614	ENSSLDG00000005850	-	92	45.614	Seriola_lalandi_dorsalis
ENSAMXG00000032446	-	94	42.975	ENSXCOG00000001200	-	99	42.975	Xiphophorus_couchianus
ENSAMXG00000032446	-	55	39.024	ENSXCOG00000009668	-	55	39.024	Xiphophorus_couchianus
ENSAMXG00000032446	-	88	44.762	ENSXCOG00000016860	-	97	48.214	Xiphophorus_couchianus
ENSAMXG00000032446	-	53	49.091	ENSXCOG00000007406	-	97	48.673	Xiphophorus_couchianus
ENSAMXG00000032446	-	59	43.220	ENSXMAG00000024641	-	94	47.788	Xiphophorus_maculatus