EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000032542 (Gene tree)
Gene ID: 103044136
Gene Symbol: ddx61
Alias: fk48d07|p54b|si:ch211-175g6.7|wu:fk48d07
Full Name: probable ATP-dependent RNA helicase DDX6
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7462 bases
Position: chr10:14180004-14187465
Accession: 103044136
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000039053	DEAD	PF00270.29	2.3e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047674	-	4796	XM_007249573	ENSAMXP00000039053	486 (aa)	XP_007249635	W5K161

Gene Model

Click here to download ENSAMXG00000032542's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000032542's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000032542	ddx61	69	32.659	ENSAMXG00000004457	ddx43	51	31.498
ENSAMXG00000032542	ddx61	85	34.856	ENSAMXG00000017837	ddx39b	95	34.856
ENSAMXG00000032542	ddx61	67	45.098	ENSAMXG00000002100	ddx1	52	45.098
ENSAMXG00000032542	ddx61	76	38.172	ENSAMXG00000019126	eif4a2	90	38.172
ENSAMXG00000032542	ddx61	98	85.685	ENSAMXG00000033980	-	96	86.105
ENSAMXG00000032542	ddx61	81	35.589	ENSAMXG00000018631	DDX39A	93	35.589
ENSAMXG00000032542	ddx61	66	32.121	ENSAMXG00000042612	-	73	32.121
ENSAMXG00000032542	ddx61	77	30.556	ENSAMXG00000013396	ddx3xb	64	31.061
ENSAMXG00000032542	ddx61	80	31.552	ENSAMXG00000010727	ddx47	83	31.552
ENSAMXG00000032542	ddx61	68	32.362	ENSAMXG00000004466	ddx5	55	32.362
ENSAMXG00000032542	ddx61	83	30.254	ENSAMXG00000002956	DDX41	69	30.254
ENSAMXG00000032542	ddx61	72	36.141	ENSAMXG00000043100	ddx19	73	36.141
ENSAMXG00000032542	ddx61	76	31.132	ENSAMXG00000017597	ddx23	51	31.148
ENSAMXG00000032542	ddx61	97	80.705	ENSAMXG00000019553	ddx6	99	81.159
ENSAMXG00000032542	ddx61	77	37.831	ENSAMXG00000020882	eif4a3	92	37.831
ENSAMXG00000032542	ddx61	76	37.736	ENSAMXG00000040730	eif4a1b	90	37.736
ENSAMXG00000032542	ddx61	83	34.398	ENSAMXG00000015256	-	93	34.250
ENSAMXG00000032542	ddx61	73	33.333	ENSAMXG00000015325	zgc:193690	81	33.333
ENSAMXG00000032542	ddx61	95	30.126	ENSAMXG00000006135	ddx10	50	31.690
ENSAMXG00000032542	ddx61	70	31.389	ENSAMXG00000010288	ddx4	54	31.856
ENSAMXG00000032542	ddx61	72	31.680	ENSAMXG00000016919	ddx49	75	31.680
ENSAMXG00000032542	ddx61	56	33.094	ENSAMXG00000042015	-	87	32.374
ENSAMXG00000032542	ddx61	76	37.903	ENSAMXG00000030251	eif4a1a	91	37.903
ENSAMXG00000032542	ddx61	71	31.180	ENSAMXG00000015550	DDX5	68	30.667
ENSAMXG00000032542	ddx61	77	30.348	ENSAMXG00000032415	ddx3xa	53	30.348

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000032542	ddx61	75	92.391	ENSAPOG00000023627	-	91	93.575	Acanthochromis_polyacanthus
ENSAMXG00000032542	ddx61	98	84.167	ENSAPOG00000014829	ddx61	97	84.632	Acanthochromis_polyacanthus
ENSAMXG00000032542	ddx61	99	79.098	ENSACIG00000018355	-	97	80.042	Amphilophus_citrinellus
ENSAMXG00000032542	ddx61	99	86.804	ENSAOCG00000006269	-	97	87.579	Amphiprion_ocellaris
ENSAMXG00000032542	ddx61	98	85.417	ENSAOCG00000007627	ddx61	97	85.895	Amphiprion_ocellaris
ENSAMXG00000032542	ddx61	98	85.417	ENSAPEG00000007293	ddx61	97	85.895	Amphiprion_percula
ENSAMXG00000032542	ddx61	99	86.804	ENSAPEG00000021368	-	97	87.579	Amphiprion_percula
ENSAMXG00000032542	ddx61	99	86.804	ENSAPEG00000020642	-	97	87.579	Amphiprion_percula
ENSAMXG00000032542	ddx61	98	84.440	ENSATEG00000011302	ddx61	98	85.294	Anabas_testudineus
ENSAMXG00000032542	ddx61	99	86.214	ENSATEG00000005424	-	97	86.975	Anabas_testudineus
ENSAMXG00000032542	ddx61	99	86.680	ENSACLG00000003260	-	97	87.815	Astatotilapia_calliptera
ENSAMXG00000032542	ddx61	98	84.200	ENSACLG00000027620	ddx61	99	84.664	Astatotilapia_calliptera
ENSAMXG00000032542	ddx61	99	86.214	ENSCSEG00000009893	-	97	86.975	Cynoglossus_semilaevis
ENSAMXG00000032542	ddx61	99	85.714	ENSCVAG00000011006	-	96	86.864	Cyprinodon_variegatus
ENSAMXG00000032542	ddx61	98	88.608	ENSDARG00000018425	ddx61	98	88.535	Danio_rerio
ENSAMXG00000032542	ddx61	98	86.515	ENSELUG00000022538	-	97	86.975	Esox_lucius
ENSAMXG00000032542	ddx61	98	88.333	ENSELUG00000020545	ddx61	97	88.842	Esox_lucius
ENSAMXG00000032542	ddx61	99	87.164	ENSFHEG00000015487	-	96	87.949	Fundulus_heteroclitus
ENSAMXG00000032542	ddx61	97	86.164	ENSGMOG00000013762	ddx61	99	86.192	Gadus_morhua
ENSAMXG00000032542	ddx61	66	82.067	ENSGMOG00000003561	-	100	82.675	Gadus_morhua
ENSAMXG00000032542	ddx61	99	86.542	ENSGAFG00000015865	-	95	88.034	Gambusia_affinis
ENSAMXG00000032542	ddx61	98	82.857	ENSGACG00000003401	ddx61	99	83.471	Gasterosteus_aculeatus
ENSAMXG00000032542	ddx61	99	84.600	ENSGACG00000002413	-	98	85.535	Gasterosteus_aculeatus
ENSAMXG00000032542	ddx61	99	86.680	ENSHBUG00000017033	-	97	87.815	Haplochromis_burtoni
ENSAMXG00000032542	ddx61	98	84.407	ENSHBUG00000017832	ddx61	99	84.874	Haplochromis_burtoni
ENSAMXG00000032542	ddx61	97	83.475	ENSHCOG00000008184	ddx61	97	83.652	Hippocampus_comes
ENSAMXG00000032542	ddx61	99	84.774	ENSHCOG00000012238	-	97	85.714	Hippocampus_comes
ENSAMXG00000032542	ddx61	98	85.684	ENSIPUG00000008367	-	98	85.805	Ictalurus_punctatus
ENSAMXG00000032542	ddx61	97	89.126	ENSIPUG00000012823	DDX6	97	89.126	Ictalurus_punctatus
ENSAMXG00000032542	ddx61	98	86.848	ENSKMAG00000007213	-	96	88.034	Kryptolebias_marmoratus
ENSAMXG00000032542	ddx61	97	85.146	ENSLBEG00000001740	ddx61	98	85.294	Labrus_bergylta
ENSAMXG00000032542	ddx61	99	85.072	ENSLBEG00000016890	-	97	85.804	Labrus_bergylta
ENSAMXG00000032542	ddx61	98	82.062	ENSLACG00000015214	ddx61	99	82.121	Latimeria_chalumnae
ENSAMXG00000032542	ddx61	76	78.906	ENSLOCG00000004352	ddx61	88	78.906	Lepisosteus_oculatus
ENSAMXG00000032542	ddx61	99	87.064	ENSMAMG00000005559	-	97	87.841	Mastacembelus_armatus
ENSAMXG00000032542	ddx61	97	85.774	ENSMAMG00000005321	ddx61	97	86.134	Mastacembelus_armatus
ENSAMXG00000032542	ddx61	98	84.407	ENSMZEG00005003556	ddx61	99	84.874	Maylandia_zebra
ENSAMXG00000032542	ddx61	99	86.680	ENSMZEG00005026268	-	97	87.815	Maylandia_zebra
ENSAMXG00000032542	ddx61	73	75.921	ENSMMOG00000008825	-	92	75.921	Mola_mola
ENSAMXG00000032542	ddx61	97	84.211	ENSMMOG00000007415	ddx61	97	84.211	Mola_mola
ENSAMXG00000032542	ddx61	99	77.572	ENSMMOG00000013694	-	96	78.151	Mola_mola
ENSAMXG00000032542	ddx61	98	74.587	ENSMALG00000013776	ddx61	96	74.844	Monopterus_albus
ENSAMXG00000032542	ddx61	99	87.552	ENSMALG00000013817	-	97	88.347	Monopterus_albus
ENSAMXG00000032542	ddx61	98	77.547	ENSNBRG00000015800	ddx61	98	77.941	Neolamprologus_brichardi
ENSAMXG00000032542	ddx61	99	79.508	ENSNBRG00000015075	-	97	80.462	Neolamprologus_brichardi
ENSAMXG00000032542	ddx61	99	86.680	ENSONIG00000013748	-	97	87.815	Oreochromis_niloticus
ENSAMXG00000032542	ddx61	98	84.025	ENSONIG00000011418	ddx61	99	84.664	Oreochromis_niloticus
ENSAMXG00000032542	ddx61	99	84.805	ENSORLG00000009178	-	97	86.345	Oryzias_latipes
ENSAMXG00000032542	ddx61	99	84.805	ENSORLG00020015515	-	97	86.345	Oryzias_latipes_hni
ENSAMXG00000032542	ddx61	99	84.805	ENSORLG00015006764	-	97	86.345	Oryzias_latipes_hsok
ENSAMXG00000032542	ddx61	97	78.197	ENSOMEG00000022326	-	99	78.151	Oryzias_melastigma
ENSAMXG00000032542	ddx61	97	87.815	ENSPKIG00000024264	ddx61	97	87.815	Paramormyrops_kingsleyae
ENSAMXG00000032542	ddx61	99	79.218	ENSPMGG00000013355	-	96	80.127	Periophthalmus_magnuspinnatus
ENSAMXG00000032542	ddx61	99	85.979	ENSPFOG00000005750	-	96	88.034	Poecilia_formosa
ENSAMXG00000032542	ddx61	99	85.979	ENSPLAG00000000403	-	96	88.034	Poecilia_latipinna
ENSAMXG00000032542	ddx61	99	86.335	ENSPMEG00000023737	-	96	88.034	Poecilia_mexicana
ENSAMXG00000032542	ddx61	98	78.378	ENSPNYG00000015045	ddx61	99	78.752	Pundamilia_nyererei
ENSAMXG00000032542	ddx61	99	86.680	ENSPNYG00000003986	-	97	87.815	Pundamilia_nyererei
ENSAMXG00000032542	ddx61	98	92.034	ENSPNAG00000024072	ddx61	98	92.144	Pygocentrus_nattereri
ENSAMXG00000032542	ddx61	99	85.773	ENSPNAG00000008742	-	97	86.526	Pygocentrus_nattereri
ENSAMXG00000032542	ddx61	97	87.342	ENSSFOG00015021404	ddx61	96	87.395	Scleropages_formosus
ENSAMXG00000032542	ddx61	96	85.043	ENSSMAG00000006591	ddx61	97	84.746	Scophthalmus_maximus
ENSAMXG00000032542	ddx61	99	86.008	ENSSMAG00000001793	-	97	86.765	Scophthalmus_maximus
ENSAMXG00000032542	ddx61	96	86.017	ENSSDUG00000009713	ddx61	97	85.714	Seriola_dumerili
ENSAMXG00000032542	ddx61	99	86.242	ENSSDUG00000007530	-	97	87.002	Seriola_dumerili
ENSAMXG00000032542	ddx61	96	86.653	ENSSLDG00000000132	ddx61	97	86.345	Seriola_lalandi_dorsalis
ENSAMXG00000032542	ddx61	99	86.242	ENSSLDG00000007608	-	97	87.002	Seriola_lalandi_dorsalis
ENSAMXG00000032542	ddx61	96	87.179	ENSSPAG00000001578	ddx61	97	86.864	Stegastes_partitus
ENSAMXG00000032542	ddx61	99	86.420	ENSSPAG00000013878	-	97	87.185	Stegastes_partitus
ENSAMXG00000032542	ddx61	100	84.146	ENSTRUG00000012432	-	97	85.895	Takifugu_rubripes
ENSAMXG00000032542	ddx61	98	85.774	ENSTNIG00000003560	-	98	86.383	Tetraodon_nigroviridis
ENSAMXG00000032542	ddx61	99	77.226	ENSXCOG00000001406	-	95	78.419	Xiphophorus_couchianus
ENSAMXG00000032542	ddx61	99	86.542	ENSXMAG00000016090	-	95	88.034	Xiphophorus_maculatus