EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000032663 (Gene tree)
Gene ID: 103042533
Gene Symbol: si:dkey-13a21.4
Alias: zgc:110195
Full Name: ras-related protein Rab-7a-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4725 bases
Position: chr22:142123-146847
Accession: 103042533
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000031284	MMR_HSR1	PF01926.23	7.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000045308	-	2236	XM_007237518	ENSAMXP00000031284	217 (aa)	XP_007237580	W5KG16

Gene Model

Click here to download ENSAMXG00000032663's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04137	Mitophagy - animal	KEGG
amex04140	Autophagy - animal	KEGG
amex04144	Endocytosis	KEGG
amex04145	Phagosome	KEGG
amex05132	Salmonella infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000032663's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000032663	si:dkey-13a21.4	86	37.037	ENSAMXG00000038243	si:dkey-16l2.16	79	43.000
ENSAMXG00000032663	si:dkey-13a21.4	82	53.933	ENSAMXG00000032027	rab7a	85	53.933
ENSAMXG00000032663	si:dkey-13a21.4	96	38.679	ENSAMXG00000004630	rab6ba	97	38.679
ENSAMXG00000032663	si:dkey-13a21.4	76	38.182	ENSAMXG00000003547	rab1ba	71	38.182
ENSAMXG00000032663	si:dkey-13a21.4	75	35.542	ENSAMXG00000017266	rab36	61	35.542
ENSAMXG00000032663	si:dkey-13a21.4	78	50.292	ENSAMXG00000026059	RAB9A	84	50.292
ENSAMXG00000032663	si:dkey-13a21.4	76	38.788	ENSAMXG00000039486	zgc:171927	75	38.788
ENSAMXG00000032663	si:dkey-13a21.4	74	36.364	ENSAMXG00000013054	rab22a	79	36.364
ENSAMXG00000032663	si:dkey-13a21.4	97	47.642	ENSAMXG00000002254	-	100	47.642
ENSAMXG00000032663	si:dkey-13a21.4	75	32.370	ENSAMXG00000035770	rasl11a	65	32.370
ENSAMXG00000032663	si:dkey-13a21.4	74	36.875	ENSAMXG00000024632	rab11al	75	36.875
ENSAMXG00000032663	si:dkey-13a21.4	77	34.286	ENSAMXG00000039737	RAB19	75	34.286
ENSAMXG00000032663	si:dkey-13a21.4	96	37.674	ENSAMXG00000032547	rab6a	98	37.674
ENSAMXG00000032663	si:dkey-13a21.4	75	39.877	ENSAMXG00000003155	rab11a	73	39.877
ENSAMXG00000032663	si:dkey-13a21.4	74	40.373	ENSAMXG00000029712	rab25b	73	40.373
ENSAMXG00000032663	si:dkey-13a21.4	82	33.708	ENSAMXG00000040126	-	63	33.708
ENSAMXG00000032663	si:dkey-13a21.4	82	32.402	ENSAMXG00000041657	rab39ba	81	32.402
ENSAMXG00000032663	si:dkey-13a21.4	82	37.297	ENSAMXG00000033470	RAB15	96	35.981
ENSAMXG00000032663	si:dkey-13a21.4	61	34.848	ENSAMXG00000003504	rab20	51	34.058
ENSAMXG00000032663	si:dkey-13a21.4	76	39.394	ENSAMXG00000032564	rab1ab	78	39.394
ENSAMXG00000032663	si:dkey-13a21.4	98	32.579	ENSAMXG00000037428	-	97	32.579
ENSAMXG00000032663	si:dkey-13a21.4	85	32.979	ENSAMXG00000036772	rab2a	85	32.447
ENSAMXG00000032663	si:dkey-13a21.4	76	39.394	ENSAMXG00000034850	-	78	39.394
ENSAMXG00000032663	si:dkey-13a21.4	92	35.149	ENSAMXG00000042073	rab18b	95	35.149
ENSAMXG00000032663	si:dkey-13a21.4	74	37.267	ENSAMXG00000042419	rab3c	71	37.267
ENSAMXG00000032663	si:dkey-13a21.4	74	38.509	ENSAMXG00000042655	rab11bb	71	38.509
ENSAMXG00000032663	si:dkey-13a21.4	74	39.506	ENSAMXG00000040879	rab25a	72	39.506
ENSAMXG00000032663	si:dkey-13a21.4	74	32.099	ENSAMXG00000041488	dnajc27	58	32.099
ENSAMXG00000032663	si:dkey-13a21.4	79	36.994	ENSAMXG00000043951	rab15	79	36.994
ENSAMXG00000032663	si:dkey-13a21.4	81	34.270	ENSAMXG00000043003	rab34a	66	34.270
ENSAMXG00000032663	si:dkey-13a21.4	81	36.932	ENSAMXG00000040604	-	88	36.413
ENSAMXG00000032663	si:dkey-13a21.4	76	34.731	ENSAMXG00000037267	-	76	34.731
ENSAMXG00000032663	si:dkey-13a21.4	93	31.188	ENSAMXG00000043717	rab5c	88	31.188
ENSAMXG00000032663	si:dkey-13a21.4	70	42.484	ENSAMXG00000040286	rab33ba	62	42.484
ENSAMXG00000032663	si:dkey-13a21.4	77	32.941	ENSAMXG00000010919	mras	78	32.941
ENSAMXG00000032663	si:dkey-13a21.4	72	30.435	ENSAMXG00000033390	rap1aa	77	30.435
ENSAMXG00000032663	si:dkey-13a21.4	93	43.689	ENSAMXG00000026476	rab9b	87	43.689
ENSAMXG00000032663	si:dkey-13a21.4	75	33.742	ENSAMXG00000010334	rras	82	35.632
ENSAMXG00000032663	si:dkey-13a21.4	75	36.585	ENSAMXG00000004882	rab12	64	36.585
ENSAMXG00000032663	si:dkey-13a21.4	70	35.948	ENSAMXG00000029130	-	79	35.948
ENSAMXG00000032663	si:dkey-13a21.4	81	38.068	ENSAMXG00000039865	rab35b	96	36.816
ENSAMXG00000032663	si:dkey-13a21.4	73	42.593	ENSAMXG00000033216	rab41	79	42.593
ENSAMXG00000032663	si:dkey-13a21.4	92	33.333	ENSAMXG00000030712	rab13	95	33.333
ENSAMXG00000032663	si:dkey-13a21.4	86	32.990	ENSAMXG00000014960	rab23	87	33.953
ENSAMXG00000032663	si:dkey-13a21.4	82	38.202	ENSAMXG00000009935	rab30	69	38.202
ENSAMXG00000032663	si:dkey-13a21.4	87	31.980	ENSAMXG00000006018	rab34b	78	33.654
ENSAMXG00000032663	si:dkey-13a21.4	97	48.585	ENSAMXG00000031957	zgc:100918	100	48.585
ENSAMXG00000032663	si:dkey-13a21.4	76	35.329	ENSAMXG00000036179	rab5aa	74	35.329
ENSAMXG00000032663	si:dkey-13a21.4	74	38.509	ENSAMXG00000037623	-	71	38.509
ENSAMXG00000032663	si:dkey-13a21.4	93	34.466	ENSAMXG00000040460	zgc:101559	80	34.466
ENSAMXG00000032663	si:dkey-13a21.4	82	32.961	ENSAMXG00000003717	rab39bb	81	32.961
ENSAMXG00000032663	si:dkey-13a21.4	95	31.628	ENSAMXG00000034227	rab32b	96	31.628
ENSAMXG00000032663	si:dkey-13a21.4	82	34.270	ENSAMXG00000009640	rab14	80	34.270
ENSAMXG00000032663	si:dkey-13a21.4	89	31.282	ENSAMXG00000035919	rab5ab	87	31.282
ENSAMXG00000032663	si:dkey-13a21.4	82	36.313	ENSAMXG00000032729	rab42a	81	36.313
ENSAMXG00000032663	si:dkey-13a21.4	87	43.979	ENSAMXG00000025889	RAB9A	93	43.979
ENSAMXG00000032663	si:dkey-13a21.4	94	35.238	ENSAMXG00000036330	RAB38	93	35.238

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000032663	si:dkey-13a21.4	97	54.028	ENSACIG00000011024	si:dkey-13a21.4	100	54.028	Amphilophus_citrinellus
ENSAMXG00000032663	si:dkey-13a21.4	93	57.426	ENSAOCG00000020491	si:dkey-13a21.4	96	57.426	Amphiprion_ocellaris
ENSAMXG00000032663	si:dkey-13a21.4	93	55.941	ENSAPEG00000023338	si:dkey-13a21.4	88	55.941	Amphiprion_percula
ENSAMXG00000032663	si:dkey-13a21.4	93	53.960	ENSATEG00000014958	si:dkey-13a21.4	96	53.960	Anabas_testudineus
ENSAMXG00000032663	si:dkey-13a21.4	94	45.854	ENSACAG00000012345	-	98	45.854	Anolis_carolinensis
ENSAMXG00000032663	si:dkey-13a21.4	99	53.738	ENSACLG00000021109	si:dkey-13a21.4	99	53.738	Astatotilapia_calliptera
ENSAMXG00000032663	si:dkey-13a21.4	82	53.073	WBGene00004271	rab-7	100	47.222	Caenorhabditis_elegans
ENSAMXG00000032663	si:dkey-13a21.4	93	54.455	ENSCVAG00000001150	si:dkey-13a21.4	96	54.455	Cyprinodon_variegatus
ENSAMXG00000032663	si:dkey-13a21.4	97	61.429	ENSDARG00000026098	si:dkey-13a21.4	100	61.429	Danio_rerio
ENSAMXG00000032663	si:dkey-13a21.4	85	50.532	ENSDNOG00000043559	-	93	49.223	Dasypus_novemcinctus
ENSAMXG00000032663	si:dkey-13a21.4	97	52.358	ENSFHEG00000002502	si:dkey-13a21.4	100	52.358	Fundulus_heteroclitus
ENSAMXG00000032663	si:dkey-13a21.4	97	51.185	ENSGAFG00000020102	si:dkey-13a21.4	100	51.185	Gambusia_affinis
ENSAMXG00000032663	si:dkey-13a21.4	99	53.738	ENSHBUG00000014023	si:dkey-13a21.4	99	53.738	Haplochromis_burtoni
ENSAMXG00000032663	si:dkey-13a21.4	78	57.988	ENSKMAG00000021039	si:dkey-13a21.4	70	57.988	Kryptolebias_marmoratus
ENSAMXG00000032663	si:dkey-13a21.4	97	52.381	ENSLBEG00000018180	si:dkey-13a21.4	100	52.381	Labrus_bergylta
ENSAMXG00000032663	si:dkey-13a21.4	97	56.872	ENSLOCG00000014749	si:dkey-13a21.4	100	56.872	Lepisosteus_oculatus
ENSAMXG00000032663	si:dkey-13a21.4	78	54.438	ENSLAFG00000028984	-	81	54.438	Loxodonta_africana
ENSAMXG00000032663	si:dkey-13a21.4	99	53.271	ENSMAMG00000021095	si:dkey-13a21.4	100	53.271	Mastacembelus_armatus
ENSAMXG00000032663	si:dkey-13a21.4	99	53.738	ENSMZEG00005010220	si:dkey-13a21.4	99	53.738	Maylandia_zebra
ENSAMXG00000032663	si:dkey-13a21.4	98	53.991	ENSNBRG00000023214	si:dkey-13a21.4	99	53.991	Neolamprologus_brichardi
ENSAMXG00000032663	si:dkey-13a21.4	99	53.738	ENSONIG00000020296	si:dkey-13a21.4	100	53.738	Oreochromis_niloticus
ENSAMXG00000032663	si:dkey-13a21.4	97	53.555	ENSORLG00000025098	si:dkey-13a21.4	100	53.555	Oryzias_latipes
ENSAMXG00000032663	si:dkey-13a21.4	97	53.081	ENSORLG00020019465	si:dkey-13a21.4	100	53.081	Oryzias_latipes_hni
ENSAMXG00000032663	si:dkey-13a21.4	97	53.555	ENSORLG00015015121	si:dkey-13a21.4	100	53.555	Oryzias_latipes_hsok
ENSAMXG00000032663	si:dkey-13a21.4	97	54.976	ENSPKIG00000008691	si:dkey-13a21.4	100	54.976	Paramormyrops_kingsleyae
ENSAMXG00000032663	si:dkey-13a21.4	90	54.082	ENSPMGG00000023170	si:dkey-13a21.4	93	52.970	Periophthalmus_magnuspinnatus
ENSAMXG00000032663	si:dkey-13a21.4	97	51.659	ENSPFOG00000015409	si:dkey-13a21.4	100	51.659	Poecilia_formosa
ENSAMXG00000032663	si:dkey-13a21.4	97	51.659	ENSPLAG00000019688	si:dkey-13a21.4	100	51.659	Poecilia_latipinna
ENSAMXG00000032663	si:dkey-13a21.4	97	51.659	ENSPMEG00000019159	si:dkey-13a21.4	100	51.659	Poecilia_mexicana
ENSAMXG00000032663	si:dkey-13a21.4	97	51.185	ENSPREG00000022241	si:dkey-13a21.4	100	51.185	Poecilia_reticulata
ENSAMXG00000032663	si:dkey-13a21.4	99	53.738	ENSPNYG00000018613	si:dkey-13a21.4	99	53.738	Pundamilia_nyererei
ENSAMXG00000032663	si:dkey-13a21.4	82	47.514	YML001W	YPT7	86	47.514	Saccharomyces_cerevisiae
ENSAMXG00000032663	si:dkey-13a21.4	97	58.571	ENSSFOG00015009566	si:dkey-13a21.4	100	58.571	Scleropages_formosus
ENSAMXG00000032663	si:dkey-13a21.4	93	52.970	ENSSMAG00000013945	si:dkey-13a21.4	95	52.970	Scophthalmus_maximus
ENSAMXG00000032663	si:dkey-13a21.4	93	54.455	ENSSDUG00000019738	si:dkey-13a21.4	96	54.455	Seriola_dumerili
ENSAMXG00000032663	si:dkey-13a21.4	93	54.950	ENSSLDG00000011597	si:dkey-13a21.4	96	54.950	Seriola_lalandi_dorsalis
ENSAMXG00000032663	si:dkey-13a21.4	94	50.732	ENSXETG00000014257	mgc75872	99	50.000	Xenopus_tropicalis