EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000032700 (Gene tree)
Gene ID: 103047182
Gene Symbol: frg1
Alias: zgc:112426
Full Name: FSHD region gene 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9537 bases
Position: chr21:2113574-2123110
Accession: 103047182
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000052416	FRG1	PF06229.12	1.7e-80	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000054609	-	1673	XM_007229261	ENSAMXP00000052416	256 (aa)	XP_007229323	UPI000BBD7FC3

Gene Model

Click here to download ENSAMXG00000032700's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000032700's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000032700	frg1	100	72.481	ENSG00000109536	FRG1	100	78.448	Homo_sapiens
ENSAMXG00000032700	frg1	100	84.375	ENSAPOG00000001060	frg1	100	84.375	Acanthochromis_polyacanthus
ENSAMXG00000032700	frg1	100	72.481	ENSAMEG00000013503	FRG1	100	72.481	Ailuropoda_melanoleuca
ENSAMXG00000032700	frg1	87	84.753	ENSACIG00000022283	frg1	99	85.068	Amphilophus_citrinellus
ENSAMXG00000032700	frg1	87	86.099	ENSAOCG00000024240	frg1	86	86.425	Amphiprion_ocellaris
ENSAMXG00000032700	frg1	100	84.375	ENSAPEG00000002486	frg1	100	84.375	Amphiprion_percula
ENSAMXG00000032700	frg1	100	82.422	ENSATEG00000010414	frg1	100	82.422	Anabas_testudineus
ENSAMXG00000032700	frg1	100	74.319	ENSAPLG00000007785	-	100	70.817	Anas_platyrhynchos
ENSAMXG00000032700	frg1	100	76.654	ENSACAG00000006877	-	100	71.984	Anolis_carolinensis
ENSAMXG00000032700	frg1	100	72.763	ENSANAG00000020876	FRG1	100	73.930	Aotus_nancymaae
ENSAMXG00000032700	frg1	100	77.734	ENSACLG00000027065	frg1	100	77.734	Astatotilapia_calliptera
ENSAMXG00000032700	frg1	100	72.481	ENSBTAG00000007089	FRG1	100	72.481	Bos_taurus
ENSAMXG00000032700	frg1	99	41.026	WBGene00014177	frg-1	99	41.026	Caenorhabditis_elegans
ENSAMXG00000032700	frg1	100	72.763	ENSCJAG00000011272	FRG1	100	73.930	Callithrix_jacchus
ENSAMXG00000032700	frg1	100	72.481	ENSCAFG00000007135	FRG1	100	72.481	Canis_familiaris
ENSAMXG00000032700	frg1	83	75.943	ENSCAFG00020000082	-	85	75.943	Canis_lupus_dingo
ENSAMXG00000032700	frg1	100	72.481	ENSCHIG00000011585	-	100	72.481	Capra_hircus
ENSAMXG00000032700	frg1	98	52.778	ENSTSYG00000031599	-	100	52.778	Carlito_syrichta
ENSAMXG00000032700	frg1	93	72.803	ENSCAPG00000016056	-	90	75.566	Cavia_aperea
ENSAMXG00000032700	frg1	100	75.097	ENSCPOG00000022277	-	100	75.097	Cavia_porcellus
ENSAMXG00000032700	frg1	100	72.763	ENSCCAG00000024627	FRG1	100	73.930	Cebus_capucinus
ENSAMXG00000032700	frg1	100	72.868	ENSCATG00000029230	FRG1	100	72.481	Cercocebus_atys
ENSAMXG00000032700	frg1	100	52.344	ENSCLAG00000006068	-	100	52.734	Chinchilla_lanigera
ENSAMXG00000032700	frg1	100	61.240	ENSCLAG00000004960	-	100	62.016	Chinchilla_lanigera
ENSAMXG00000032700	frg1	99	50.593	ENSCLAG00000009263	-	100	50.593	Chinchilla_lanigera
ENSAMXG00000032700	frg1	100	75.097	ENSCLAG00000000370	-	100	75.097	Chinchilla_lanigera
ENSAMXG00000032700	frg1	100	72.868	ENSCSAG00000002899	FRG1	100	72.481	Chlorocebus_sabaeus
ENSAMXG00000032700	frg1	84	71.759	ENSCSAG00000017729	-	100	71.759	Chlorocebus_sabaeus
ENSAMXG00000032700	frg1	88	74.554	ENSCPBG00000009211	-	86	75.566	Chrysemys_picta_bellii
ENSAMXG00000032700	frg1	99	48.507	ENSCING00000005161	-	99	48.881	Ciona_intestinalis
ENSAMXG00000032700	frg1	52	53.030	ENSCSAVG00000008018	-	100	48.370	Ciona_savignyi
ENSAMXG00000032700	frg1	100	72.868	ENSCANG00000020991	FRG1	100	72.481	Colobus_angolensis_palliatus
ENSAMXG00000032700	frg1	100	72.481	ENSCGRG00001014998	Frg1	100	72.093	Cricetulus_griseus_chok1gshd
ENSAMXG00000032700	frg1	100	59.144	ENSCGRG00000003902	-	96	59.144	Cricetulus_griseus_crigri
ENSAMXG00000032700	frg1	100	72.481	ENSCGRG00000011860	-	100	72.093	Cricetulus_griseus_crigri
ENSAMXG00000032700	frg1	96	79.592	ENSCSEG00000015950	frg1	100	79.592	Cynoglossus_semilaevis
ENSAMXG00000032700	frg1	100	81.250	ENSCVAG00000009985	frg1	100	81.250	Cyprinodon_variegatus
ENSAMXG00000032700	frg1	100	87.109	ENSDARG00000056504	frg1	100	90.141	Danio_rerio
ENSAMXG00000032700	frg1	100	72.093	ENSDNOG00000014886	FRG1	100	72.093	Dasypus_novemcinctus
ENSAMXG00000032700	frg1	100	62.016	ENSDORG00000016190	Frg1	100	62.016	Dipodomys_ordii
ENSAMXG00000032700	frg1	100	48.485	FBgn0036964	FRG1	100	48.485	Drosophila_melanogaster
ENSAMXG00000032700	frg1	100	71.318	ENSETEG00000012349	-	100	70.543	Echinops_telfairi
ENSAMXG00000032700	frg1	58	56.081	ENSEBUG00000012359	FRG1	89	56.081	Eptatretus_burgeri
ENSAMXG00000032700	frg1	100	74.708	ENSEASG00005017497	FRG1	100	74.708	Equus_asinus_asinus
ENSAMXG00000032700	frg1	100	74.708	ENSECAG00000003122	FRG1	100	74.708	Equus_caballus
ENSAMXG00000032700	frg1	61	77.707	ENSEEUG00000000145	-	100	77.707	Erinaceus_europaeus
ENSAMXG00000032700	frg1	100	81.250	ENSELUG00000021712	frg1	100	81.250	Esox_lucius
ENSAMXG00000032700	frg1	100	72.481	ENSFCAG00000025737	FRG1	100	72.481	Felis_catus
ENSAMXG00000032700	frg1	87	73.094	ENSFALG00000011231	-	86	73.636	Ficedula_albicollis
ENSAMXG00000032700	frg1	100	64.231	ENSFDAG00000012697	-	98	71.495	Fukomys_damarensis
ENSAMXG00000032700	frg1	100	75.486	ENSFDAG00000000962	-	100	75.097	Fukomys_damarensis
ENSAMXG00000032700	frg1	100	80.078	ENSFHEG00000010540	frg1	100	80.078	Fundulus_heteroclitus
ENSAMXG00000032700	frg1	100	77.734	ENSGMOG00000000867	frg1	100	77.734	Gadus_morhua
ENSAMXG00000032700	frg1	100	75.486	ENSGALG00000013590	-	100	71.595	Gallus_gallus
ENSAMXG00000032700	frg1	81	79.808	ENSGAFG00000013855	frg1	100	79.808	Gambusia_affinis
ENSAMXG00000032700	frg1	100	77.734	ENSGACG00000016888	frg1	100	77.734	Gasterosteus_aculeatus
ENSAMXG00000032700	frg1	100	75.097	ENSGAGG00000025012	-	100	71.206	Gopherus_agassizii
ENSAMXG00000032700	frg1	68	68.000	ENSGGOG00000012888	-	88	68.000	Gorilla_gorilla
ENSAMXG00000032700	frg1	100	48.106	ENSGGOG00000040796	-	100	47.727	Gorilla_gorilla
ENSAMXG00000032700	frg1	100	84.375	ENSHBUG00000010667	frg1	100	84.375	Haplochromis_burtoni
ENSAMXG00000032700	frg1	99	73.047	ENSHGLG00000020402	-	94	73.047	Heterocephalus_glaber_female
ENSAMXG00000032700	frg1	100	75.875	ENSHGLG00000005601	FRG1	100	75.875	Heterocephalus_glaber_female
ENSAMXG00000032700	frg1	100	62.891	ENSHGLG00000001211	-	100	62.891	Heterocephalus_glaber_female
ENSAMXG00000032700	frg1	99	71.484	ENSHGLG00000020943	-	99	71.484	Heterocephalus_glaber_female
ENSAMXG00000032700	frg1	100	63.281	ENSHGLG00100010674	-	100	63.281	Heterocephalus_glaber_male
ENSAMXG00000032700	frg1	100	76.265	ENSHGLG00100016261	-	100	76.265	Heterocephalus_glaber_male
ENSAMXG00000032700	frg1	99	71.484	ENSHGLG00100021211	-	99	71.484	Heterocephalus_glaber_male
ENSAMXG00000032700	frg1	100	58.984	ENSHGLG00100015285	-	100	58.984	Heterocephalus_glaber_male
ENSAMXG00000032700	frg1	87	81.166	ENSHCOG00000000224	frg1	94	80.995	Hippocampus_comes
ENSAMXG00000032700	frg1	100	85.992	ENSIPUG00000022716	frg1	100	85.992	Ictalurus_punctatus
ENSAMXG00000032700	frg1	100	72.481	ENSSTOG00000002857	-	100	72.481	Ictidomys_tridecemlineatus
ENSAMXG00000032700	frg1	100	72.481	ENSJJAG00000020625	Frg1	100	72.481	Jaculus_jaculus
ENSAMXG00000032700	frg1	100	78.516	ENSKMAG00000005841	frg1	100	78.516	Kryptolebias_marmoratus
ENSAMXG00000032700	frg1	100	80.469	ENSLBEG00000001466	frg1	100	80.469	Labrus_bergylta
ENSAMXG00000032700	frg1	100	64.504	ENSLACG00000010243	frg1	100	64.504	Latimeria_chalumnae
ENSAMXG00000032700	frg1	100	80.078	ENSLOCG00000013868	frg1	100	80.078	Lepisosteus_oculatus
ENSAMXG00000032700	frg1	100	71.705	ENSLAFG00000011191	FRG1	100	71.705	Loxodonta_africana
ENSAMXG00000032700	frg1	100	72.868	ENSMFAG00000031178	FRG1	100	72.481	Macaca_fascicularis
ENSAMXG00000032700	frg1	83	66.355	ENSMFAG00000042873	-	89	66.355	Macaca_fascicularis
ENSAMXG00000032700	frg1	100	72.868	ENSMMUG00000001824	FRG1	100	72.481	Macaca_mulatta
ENSAMXG00000032700	frg1	79	66.502	ENSMMUG00000047496	-	87	66.502	Macaca_mulatta
ENSAMXG00000032700	frg1	96	68.016	ENSMNEG00000018620	FRG1	100	67.611	Macaca_nemestrina
ENSAMXG00000032700	frg1	100	72.868	ENSMLEG00000028881	FRG1	100	72.481	Mandrillus_leucophaeus
ENSAMXG00000032700	frg1	100	81.641	ENSMAMG00000012406	frg1	100	81.641	Mastacembelus_armatus
ENSAMXG00000032700	frg1	100	83.984	ENSMZEG00005007549	frg1	100	83.984	Maylandia_zebra
ENSAMXG00000032700	frg1	100	75.486	ENSMGAG00000011481	-	100	71.595	Meleagris_gallopavo
ENSAMXG00000032700	frg1	100	72.481	ENSMAUG00000000847	Frg1	100	72.093	Mesocricetus_auratus
ENSAMXG00000032700	frg1	100	72.868	ENSMICG00000046816	FRG1	100	72.481	Microcebus_murinus
ENSAMXG00000032700	frg1	100	66.279	ENSMOCG00000023000	Frg1	100	65.891	Microtus_ochrogaster
ENSAMXG00000032700	frg1	87	80.717	ENSMMOG00000004008	frg1	94	81.448	Mola_mola
ENSAMXG00000032700	frg1	100	72.481	ENSMODG00000019031	-	87	72.868	Monodelphis_domestica
ENSAMXG00000032700	frg1	100	81.250	ENSMALG00000018497	frg1	100	81.250	Monopterus_albus
ENSAMXG00000032700	frg1	100	72.093	MGP_CAROLIEiJ_G0031006	Frg1	100	71.705	Mus_caroli
ENSAMXG00000032700	frg1	100	72.093	ENSMUSG00000031590	Frg1	100	71.705	Mus_musculus
ENSAMXG00000032700	frg1	100	72.481	MGP_PahariEiJ_G0021475	Frg1	100	72.093	Mus_pahari
ENSAMXG00000032700	frg1	100	71.705	MGP_SPRETEiJ_G0032120	Frg1	100	71.318	Mus_spretus
ENSAMXG00000032700	frg1	100	72.481	ENSMPUG00000017962	FRG1	100	72.481	Mustela_putorius_furo
ENSAMXG00000032700	frg1	100	73.541	ENSMLUG00000023179	FRG1	100	74.708	Myotis_lucifugus
ENSAMXG00000032700	frg1	100	72.093	ENSNGAG00000016411	Frg1	100	71.705	Nannospalax_galili
ENSAMXG00000032700	frg1	81	76.077	ENSNBRG00000006806	frg1	95	75.481	Neolamprologus_brichardi
ENSAMXG00000032700	frg1	100	65.134	ENSNLEG00000035849	-	100	63.602	Nomascus_leucogenys
ENSAMXG00000032700	frg1	100	53.516	ENSNLEG00000032846	-	100	68.750	Nomascus_leucogenys
ENSAMXG00000032700	frg1	100	73.152	ENSNLEG00000000930	FRG1	100	73.152	Nomascus_leucogenys
ENSAMXG00000032700	frg1	79	67.164	ENSNLEG00000036059	-	86	67.164	Nomascus_leucogenys
ENSAMXG00000032700	frg1	100	61.776	ENSNLEG00000032333	-	100	61.776	Nomascus_leucogenys
ENSAMXG00000032700	frg1	79	66.169	ENSNLEG00000028874	-	91	66.169	Nomascus_leucogenys
ENSAMXG00000032700	frg1	59	76.316	ENSMEUG00000007509	-	59	76.316	Notamacropus_eugenii
ENSAMXG00000032700	frg1	100	62.646	ENSOPRG00000004722	-	100	62.016	Ochotona_princeps
ENSAMXG00000032700	frg1	100	55.859	ENSODEG00000006953	-	100	55.078	Octodon_degus
ENSAMXG00000032700	frg1	100	75.097	ENSODEG00000006458	-	100	75.097	Octodon_degus
ENSAMXG00000032700	frg1	100	83.268	ENSONIG00000010162	frg1	100	83.268	Oreochromis_niloticus
ENSAMXG00000032700	frg1	76	71.282	ENSOANG00000005659	-	86	71.282	Ornithorhynchus_anatinus
ENSAMXG00000032700	frg1	100	72.868	ENSOCUG00000009038	-	100	72.481	Oryctolagus_cuniculus
ENSAMXG00000032700	frg1	96	81.224	ENSORLG00000008106	frg1	89	81.224	Oryzias_latipes
ENSAMXG00000032700	frg1	100	81.250	ENSORLG00020014355	frg1	100	81.250	Oryzias_latipes_hni
ENSAMXG00000032700	frg1	100	81.250	ENSORLG00015014159	frg1	100	81.250	Oryzias_latipes_hsok
ENSAMXG00000032700	frg1	85	78.802	ENSOMEG00000002468	frg1	89	78.802	Oryzias_melastigma
ENSAMXG00000032700	frg1	100	72.868	ENSOGAG00000005749	-	100	72.481	Otolemur_garnettii
ENSAMXG00000032700	frg1	100	70.498	ENSOARG00000008592	FRG1	100	70.498	Ovis_aries
ENSAMXG00000032700	frg1	96	52.713	ENSPPAG00000043174	-	100	53.150	Pan_paniscus
ENSAMXG00000032700	frg1	84	71.759	ENSPPAG00000043170	-	100	71.296	Pan_paniscus
ENSAMXG00000032700	frg1	100	72.093	ENSPPRG00000025003	-	100	72.093	Panthera_pardus
ENSAMXG00000032700	frg1	100	71.206	ENSPPRG00000019777	-	100	72.374	Panthera_pardus
ENSAMXG00000032700	frg1	100	71.595	ENSPTIG00000006566	-	100	72.763	Panthera_tigris_altaica
ENSAMXG00000032700	frg1	100	72.093	ENSPTIG00000006588	-	100	72.093	Panthera_tigris_altaica
ENSAMXG00000032700	frg1	95	60.081	ENSPTRG00000052363	-	94	71.287	Pan_troglodytes
ENSAMXG00000032700	frg1	100	72.481	ENSPTRG00000050205	-	100	72.093	Pan_troglodytes
ENSAMXG00000032700	frg1	96	59.109	ENSPTRG00000050204	-	100	59.109	Pan_troglodytes
ENSAMXG00000032700	frg1	96	60.324	ENSPTRG00000044710	-	100	60.324	Pan_troglodytes
ENSAMXG00000032700	frg1	100	72.481	ENSPTRG00000016671	-	100	72.093	Pan_troglodytes
ENSAMXG00000032700	frg1	88	61.304	ENSPTRG00000043123	-	94	60.173	Pan_troglodytes
ENSAMXG00000032700	frg1	70	66.667	ENSPANG00000031530	-	84	66.111	Papio_anubis
ENSAMXG00000032700	frg1	100	77.821	ENSPKIG00000024189	frg1	100	77.432	Paramormyrops_kingsleyae
ENSAMXG00000032700	frg1	84	75.463	ENSPSIG00000017971	-	82	75.463	Pelodiscus_sinensis
ENSAMXG00000032700	frg1	98	74.000	ENSPMGG00000019273	frg1	100	73.200	Periophthalmus_magnuspinnatus
ENSAMXG00000032700	frg1	100	72.481	ENSPEMG00000000650	Frg1	100	72.093	Peromyscus_maniculatus_bairdii
ENSAMXG00000032700	frg1	100	74.031	ENSPCIG00000007530	-	69	74.031	Phascolarctos_cinereus
ENSAMXG00000032700	frg1	100	82.031	ENSPFOG00000006721	frg1	100	82.031	Poecilia_formosa
ENSAMXG00000032700	frg1	100	82.031	ENSPMEG00000013816	frg1	100	82.031	Poecilia_mexicana
ENSAMXG00000032700	frg1	100	82.422	ENSPREG00000000097	frg1	100	82.422	Poecilia_reticulata
ENSAMXG00000032700	frg1	68	68.208	ENSPPYG00000011275	-	94	68.208	Pongo_abelii
ENSAMXG00000032700	frg1	57	76.552	ENSPPYG00000029810	-	100	76.552	Pongo_abelii
ENSAMXG00000032700	frg1	95	69.919	ENSPCAG00000014953	-	100	69.919	Procavia_capensis
ENSAMXG00000032700	frg1	79	57.843	ENSPCOG00000022726	FRG1	95	57.843	Propithecus_coquereli
ENSAMXG00000032700	frg1	100	59.302	ENSPVAG00000010551	FRG1	100	58.915	Pteropus_vampyrus
ENSAMXG00000032700	frg1	68	86.782	ENSPNYG00000015209	frg1	74	87.791	Pundamilia_nyererei
ENSAMXG00000032700	frg1	100	83.012	ENSPNAG00000013259	frg1	100	82.239	Pygocentrus_nattereri
ENSAMXG00000032700	frg1	100	72.093	ENSRNOG00000009846	Frg1	100	71.705	Rattus_norvegicus
ENSAMXG00000032700	frg1	87	71.875	ENSRBIG00000042219	-	94	71.111	Rhinopithecus_bieti
ENSAMXG00000032700	frg1	82	69.668	ENSRROG00000032084	-	94	67.308	Rhinopithecus_roxellana
ENSAMXG00000032700	frg1	100	70.155	ENSRROG00000015523	FRG1	100	69.767	Rhinopithecus_roxellana
ENSAMXG00000032700	frg1	100	73.152	ENSSBOG00000034175	FRG1	100	74.319	Saimiri_boliviensis_boliviensis
ENSAMXG00000032700	frg1	100	71.705	ENSSHAG00000005886	-	100	72.481	Sarcophilus_harrisii
ENSAMXG00000032700	frg1	97	77.510	ENSSFOG00015021361	frg1	99	77.510	Scleropages_formosus
ENSAMXG00000032700	frg1	100	80.078	ENSSMAG00000001213	frg1	100	80.078	Scophthalmus_maximus
ENSAMXG00000032700	frg1	100	84.375	ENSSDUG00000018886	frg1	100	84.375	Seriola_dumerili
ENSAMXG00000032700	frg1	100	83.594	ENSSLDG00000024191	frg1	100	83.594	Seriola_lalandi_dorsalis
ENSAMXG00000032700	frg1	66	74.405	ENSSARG00000002471	-	91	73.256	Sorex_araneus
ENSAMXG00000032700	frg1	100	72.656	ENSSPUG00000017326	-	100	72.656	Sphenodon_punctatus
ENSAMXG00000032700	frg1	100	78.516	ENSSPAG00000013294	frg1	100	78.516	Stegastes_partitus
ENSAMXG00000032700	frg1	100	72.868	ENSSSCG00000006996	FRG1	100	72.868	Sus_scrofa
ENSAMXG00000032700	frg1	100	73.930	ENSTGUG00000007028	-	100	71.206	Taeniopygia_guttata
ENSAMXG00000032700	frg1	100	80.859	ENSTRUG00000016208	frg1	100	80.859	Takifugu_rubripes
ENSAMXG00000032700	frg1	100	81.250	ENSTNIG00000007128	frg1	100	81.250	Tetraodon_nigroviridis
ENSAMXG00000032700	frg1	78	46.734	ENSTBEG00000017605	-	99	46.734	Tupaia_belangeri
ENSAMXG00000032700	frg1	100	71.318	ENSTBEG00000014491	-	100	70.930	Tupaia_belangeri
ENSAMXG00000032700	frg1	83	52.830	ENSTBEG00000012789	-	99	52.830	Tupaia_belangeri
ENSAMXG00000032700	frg1	100	72.093	ENSTTRG00000003429	FRG1	100	72.093	Tursiops_truncatus
ENSAMXG00000032700	frg1	96	70.204	ENSUAMG00000012123	-	100	69.388	Ursus_americanus
ENSAMXG00000032700	frg1	100	72.481	ENSUMAG00000021119	FRG1	100	72.481	Ursus_maritimus
ENSAMXG00000032700	frg1	100	71.318	ENSVPAG00000000616	FRG1	100	70.543	Vicugna_pacos
ENSAMXG00000032700	frg1	88	74.554	ENSVPAG00000011977	-	93	75.113	Vicugna_pacos
ENSAMXG00000032700	frg1	83	75.943	ENSVVUG00000007181	-	77	75.943	Vulpes_vulpes
ENSAMXG00000032700	frg1	100	73.541	ENSXETG00000012470	frg1	100	69.261	Xenopus_tropicalis
ENSAMXG00000032700	frg1	100	76.953	ENSXCOG00000005312	frg1	100	76.953	Xiphophorus_couchianus
ENSAMXG00000032700	frg1	100	81.641	ENSXMAG00000007751	frg1	100	81.641	Xiphophorus_maculatus