EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000032845 (Gene tree)
Gene ID: 103032654
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 184-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12263 bases
Position: chr1:2947671-2959933
Accession: 103032654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000051695	zf-C2H2	PF00096.26	2.6e-12	1	3
ENSAMXP00000051695	zf-C2H2	PF00096.26	2.6e-12	2	3
ENSAMXP00000051695	zf-C2H2	PF00096.26	2.6e-12	3	3
ENSAMXP00000029399	zf-C2H2	PF00096.26	1e-11	1	3
ENSAMXP00000029399	zf-C2H2	PF00096.26	1e-11	2	3
ENSAMXP00000029399	zf-C2H2	PF00096.26	1e-11	3	3
ENSAMXP00000029399	zf-met	PF12874.7	5.9e-08	1	2
ENSAMXP00000029399	zf-met	PF12874.7	5.9e-08	2	2
ENSAMXP00000051695	zf-met	PF12874.7	7.2e-08	1	2
ENSAMXP00000051695	zf-met	PF12874.7	7.2e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057541	-	4795	XM_007245062	ENSAMXP00000051695	528 (aa)	XP_007245124	UPI000BBD817D
ENSAMXT00000039203	-	4738	XM_022673321	ENSAMXP00000029399	509 (aa)	XP_022529042	UPI000BBD883F

Gene Model

Click here to download ENSAMXG00000032845's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000032845's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000032845	-	52	36.567	ENSAMXG00000034333	-	90	42.045
ENSAMXG00000032845	-	57	39.623	ENSAMXG00000038453	-	82	35.965
ENSAMXG00000032845	-	56	41.290	ENSAMXG00000035809	-	99	43.382
ENSAMXG00000032845	-	56	35.547	ENSAMXG00000032457	-	91	36.134
ENSAMXG00000032845	-	56	43.382	ENSAMXG00000025965	-	91	45.299
ENSAMXG00000032845	-	77	35.745	ENSAMXG00000039016	-	88	37.037
ENSAMXG00000032845	-	56	47.312	ENSAMXG00000039432	-	94	47.312
ENSAMXG00000032845	-	52	38.953	ENSAMXG00000031794	-	94	38.953
ENSAMXG00000032845	-	56	44.853	ENSAMXG00000037885	-	95	44.853
ENSAMXG00000032845	-	72	43.103	ENSAMXG00000034096	-	84	43.103
ENSAMXG00000032845	-	50	44.595	ENSAMXG00000035875	-	99	44.595
ENSAMXG00000032845	-	56	42.342	ENSAMXG00000007092	-	87	46.237
ENSAMXG00000032845	-	56	40.230	ENSAMXG00000039744	-	98	41.290
ENSAMXG00000032845	-	56	47.059	ENSAMXG00000036849	-	78	47.059
ENSAMXG00000032845	-	56	40.000	ENSAMXG00000035690	-	68	42.735
ENSAMXG00000032845	-	56	39.884	ENSAMXG00000037143	-	93	40.650
ENSAMXG00000032845	-	59	34.673	ENSAMXG00000041864	prdm5	93	34.673
ENSAMXG00000032845	-	56	44.898	ENSAMXG00000041128	-	86	48.148
ENSAMXG00000032845	-	57	32.836	ENSAMXG00000012589	-	86	32.948
ENSAMXG00000032845	-	56	41.520	ENSAMXG00000043302	-	73	41.765
ENSAMXG00000032845	-	56	44.928	ENSAMXG00000039182	-	65	36.683
ENSAMXG00000032845	-	56	45.283	ENSAMXG00000044028	-	99	45.283
ENSAMXG00000032845	-	58	38.462	ENSAMXG00000029783	-	82	40.116
ENSAMXG00000032845	-	61	35.751	ENSAMXG00000042633	-	92	40.411
ENSAMXG00000032845	-	57	38.728	ENSAMXG00000044110	-	86	39.831
ENSAMXG00000032845	-	54	38.710	ENSAMXG00000034958	-	90	40.230
ENSAMXG00000032845	-	57	40.667	ENSAMXG00000035920	-	87	42.424
ENSAMXG00000032845	-	56	40.828	ENSAMXG00000031501	-	89	40.828
ENSAMXG00000032845	-	52	39.645	ENSAMXG00000041721	-	66	38.857
ENSAMXG00000032845	-	56	43.478	ENSAMXG00000041725	-	88	50.000
ENSAMXG00000032845	-	57	37.209	ENSAMXG00000032237	-	92	37.931
ENSAMXG00000032845	-	52	43.860	ENSAMXG00000038280	-	89	34.579
ENSAMXG00000032845	-	59	41.176	ENSAMXG00000010078	-	85	44.554
ENSAMXG00000032845	-	52	39.568	ENSAMXG00000039162	-	94	33.772
ENSAMXG00000032845	-	57	38.095	ENSAMXG00000034402	-	92	39.726
ENSAMXG00000032845	-	56	46.154	ENSAMXG00000041865	-	97	46.154
ENSAMXG00000032845	-	56	40.278	ENSAMXG00000037760	-	95	40.278
ENSAMXG00000032845	-	56	35.776	ENSAMXG00000040212	-	85	36.916
ENSAMXG00000032845	-	56	45.370	ENSAMXG00000008613	-	95	47.436
ENSAMXG00000032845	-	60	37.037	ENSAMXG00000029960	-	95	37.714
ENSAMXG00000032845	-	55	37.688	ENSAMXG00000035127	-	89	43.548
ENSAMXG00000032845	-	56	40.000	ENSAMXG00000036567	-	76	40.714
ENSAMXG00000032845	-	58	36.264	ENSAMXG00000042174	-	91	37.264
ENSAMXG00000032845	-	58	39.474	ENSAMXG00000010930	-	75	41.000
ENSAMXG00000032845	-	54	51.282	ENSAMXG00000036762	-	98	43.697
ENSAMXG00000032845	-	52	36.752	ENSAMXG00000034344	-	71	36.752
ENSAMXG00000032845	-	56	40.351	ENSAMXG00000018161	-	95	40.351
ENSAMXG00000032845	-	62	40.805	ENSAMXG00000017959	-	93	40.805
ENSAMXG00000032845	-	56	42.017	ENSAMXG00000032619	-	97	42.017
ENSAMXG00000032845	-	52	36.816	ENSAMXG00000017609	-	75	37.000
ENSAMXG00000032845	-	52	41.958	ENSAMXG00000037981	-	71	41.958
ENSAMXG00000032845	-	57	39.655	ENSAMXG00000030742	-	99	39.655
ENSAMXG00000032845	-	56	46.465	ENSAMXG00000013492	-	95	46.465
ENSAMXG00000032845	-	63	34.715	ENSAMXG00000038905	-	87	36.571
ENSAMXG00000032845	-	56	38.150	ENSAMXG00000040677	-	84	38.150
ENSAMXG00000032845	-	58	38.519	ENSAMXG00000037717	-	90	40.517
ENSAMXG00000032845	-	51	40.000	ENSAMXG00000039770	-	83	40.000
ENSAMXG00000032845	-	56	36.232	ENSAMXG00000038324	-	80	38.095
ENSAMXG00000032845	-	56	39.267	ENSAMXG00000038325	-	90	40.805
ENSAMXG00000032845	-	56	40.000	ENSAMXG00000039879	-	98	40.876
ENSAMXG00000032845	-	63	36.029	ENSAMXG00000038284	-	92	38.596
ENSAMXG00000032845	-	56	39.306	ENSAMXG00000001626	-	90	39.535
ENSAMXG00000032845	-	56	39.130	ENSAMXG00000041975	-	83	42.017
ENSAMXG00000032845	-	57	39.130	ENSAMXG00000032212	-	86	41.606
ENSAMXG00000032845	-	56	38.519	ENSAMXG00000035683	-	91	42.735
ENSAMXG00000032845	-	59	34.746	ENSAMXG00000038536	-	82	39.000
ENSAMXG00000032845	-	57	38.728	ENSAMXG00000026143	-	93	38.728
ENSAMXG00000032845	-	58	47.692	ENSAMXG00000037923	-	98	47.692
ENSAMXG00000032845	-	56	40.206	ENSAMXG00000031489	-	91	44.304
ENSAMXG00000032845	-	53	39.037	ENSAMXG00000036915	-	94	40.828
ENSAMXG00000032845	-	54	40.476	ENSAMXG00000025455	-	98	41.667
ENSAMXG00000032845	-	57	35.838	ENSAMXG00000034857	-	67	36.283
ENSAMXG00000032845	-	58	42.647	ENSAMXG00000009558	-	94	38.798
ENSAMXG00000032845	-	56	33.772	ENSAMXG00000031009	-	87	33.772
ENSAMXG00000032845	-	56	39.496	ENSAMXG00000036257	-	91	39.496
ENSAMXG00000032845	-	56	40.714	ENSAMXG00000012604	-	96	40.714
ENSAMXG00000032845	-	60	37.500	ENSAMXG00000042593	-	93	36.747
ENSAMXG00000032845	-	56	39.506	ENSAMXG00000012873	-	95	40.690
ENSAMXG00000032845	-	52	41.429	ENSAMXG00000035145	-	60	41.429
ENSAMXG00000032845	-	52	33.582	ENSAMXG00000013274	-	80	33.582
ENSAMXG00000032845	-	56	43.860	ENSAMXG00000036633	-	62	45.000
ENSAMXG00000032845	-	58	37.156	ENSAMXG00000042746	-	80	39.080
ENSAMXG00000032845	-	52	39.306	ENSAMXG00000036233	-	68	39.306
ENSAMXG00000032845	-	56	40.645	ENSAMXG00000011804	-	86	43.066
ENSAMXG00000032845	-	56	35.514	ENSAMXG00000040806	-	89	35.514
ENSAMXG00000032845	-	54	48.454	ENSAMXG00000040630	-	98	43.810
ENSAMXG00000032845	-	56	34.973	ENSAMXG00000039004	-	88	39.568
ENSAMXG00000032845	-	56	42.268	ENSAMXG00000000353	-	95	39.568
ENSAMXG00000032845	-	55	32.749	ENSAMXG00000007973	-	88	40.323
ENSAMXG00000032845	-	56	38.624	ENSAMXG00000041609	-	96	38.624
ENSAMXG00000032845	-	54	41.958	ENSAMXG00000034847	-	83	42.254
ENSAMXG00000032845	-	52	43.103	ENSAMXG00000009563	-	92	43.478
ENSAMXG00000032845	-	56	46.392	ENSAMXG00000024978	-	95	51.282
ENSAMXG00000032845	-	55	45.714	ENSAMXG00000030530	-	91	43.030
ENSAMXG00000032845	-	57	39.899	ENSAMXG00000031844	-	89	40.237
ENSAMXG00000032845	-	57	40.860	ENSAMXG00000039752	-	92	36.364
ENSAMXG00000032845	-	55	41.837	ENSAMXG00000036241	-	80	48.000
ENSAMXG00000032845	-	56	40.714	ENSAMXG00000029178	-	96	46.154
ENSAMXG00000032845	-	52	33.971	ENSAMXG00000026142	-	86	39.766
ENSAMXG00000032845	-	52	40.690	ENSAMXG00000026144	-	88	40.690
ENSAMXG00000032845	-	54	45.968	ENSAMXG00000039977	-	89	45.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000032845	-	56	32.407	ENSCING00000004861	zf(c2h2)-12	69	32.143	Ciona_intestinalis
ENSAMXG00000032845	-	56	40.909	ENSCSAVG00000009574	-	97	42.697	Ciona_savignyi
ENSAMXG00000032845	-	53	31.522	ENSCSAVG00000006729	-	70	32.065	Ciona_savignyi
ENSAMXG00000032845	-	56	31.551	ENSCSAVG00000005896	-	70	31.551	Ciona_savignyi
ENSAMXG00000032845	-	56	33.088	ENSCSEG00000005491	-	70	33.088	Cynoglossus_semilaevis
ENSAMXG00000032845	-	52	35.465	ENSCVAG00000016098	-	56	35.465	Cyprinodon_variegatus
ENSAMXG00000032845	-	64	36.301	ENSCVAG00000002295	-	59	38.462	Cyprinodon_variegatus
ENSAMXG00000032845	-	57	43.023	ENSEBUG00000008392	-	75	43.023	Eptatretus_burgeri
ENSAMXG00000032845	-	52	41.520	ENSEBUG00000000735	-	92	41.520	Eptatretus_burgeri
ENSAMXG00000032845	-	76	34.783	ENSFHEG00000013644	-	89	35.882	Fundulus_heteroclitus
ENSAMXG00000032845	-	52	35.758	ENSFHEG00000012990	-	90	34.545	Fundulus_heteroclitus
ENSAMXG00000032845	-	66	36.364	ENSHCOG00000014881	-	63	37.500	Hippocampus_comes
ENSAMXG00000032845	-	53	55.390	ENSIPUG00000013526	-	88	55.390	Ictalurus_punctatus
ENSAMXG00000032845	-	56	38.012	ENSKMAG00000012909	-	58	38.012	Kryptolebias_marmoratus
ENSAMXG00000032845	-	92	48.731	ENSKMAG00000011202	-	79	48.731	Kryptolebias_marmoratus
ENSAMXG00000032845	-	59	42.969	ENSONIG00000016416	-	98	41.985	Oreochromis_niloticus
ENSAMXG00000032845	-	75	36.095	ENSOMEG00000017673	-	67	36.095	Oryzias_melastigma
ENSAMXG00000032845	-	61	30.435	ENSPMGG00000010563	-	73	30.435	Periophthalmus_magnuspinnatus
ENSAMXG00000032845	-	56	36.364	ENSPMGG00000022524	-	96	40.000	Periophthalmus_magnuspinnatus
ENSAMXG00000032845	-	50	35.398	ENSPMGG00000000243	-	76	38.144	Periophthalmus_magnuspinnatus
ENSAMXG00000032845	-	52	37.324	ENSPMAG00000007983	-	98	37.324	Petromyzon_marinus
ENSAMXG00000032845	-	66	33.168	ENSPLAG00000006174	-	70	38.938	Poecilia_latipinna
ENSAMXG00000032845	-	54	45.882	ENSPMEG00000022676	-	99	45.882	Poecilia_mexicana
ENSAMXG00000032845	-	66	35.185	ENSPMEG00000007503	-	57	35.185	Poecilia_mexicana
ENSAMXG00000032845	-	76	34.503	ENSPREG00000016204	-	64	36.364	Poecilia_reticulata
ENSAMXG00000032845	-	63	32.973	ENSPREG00000015352	-	66	32.124	Poecilia_reticulata
ENSAMXG00000032845	-	66	60.784	ENSSMAG00000000404	-	85	68.182	Scophthalmus_maximus
ENSAMXG00000032845	-	66	41.176	ENSSDUG00000000946	-	96	37.778	Seriola_dumerili
ENSAMXG00000032845	-	60	35.673	ENSTNIG00000008154	-	52	35.673	Tetraodon_nigroviridis