EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033060 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 3501 bases
Position: chr17:21750230-21753730
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029613	RVT_1	PF00078.27	5.7e-23	1	1
ENSAMXP00000029613	RNase_H	PF00075.24	5.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047633	-	3501	-	ENSAMXP00000029613	1166 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033060's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033060's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033060	-	56	30.061	ENSAMXG00000038531	-	50	30.061
ENSAMXG00000033060	-	58	30.887	ENSAMXG00000038338	-	51	30.887
ENSAMXG00000033060	-	50	30.804	ENSAMXG00000041114	-	62	30.804
ENSAMXG00000033060	-	59	30.453	ENSAMXG00000042521	-	54	30.453
ENSAMXG00000033060	-	87	36.407	ENSAMXG00000040932	-	80	36.407
ENSAMXG00000033060	-	82	30.567	ENSAMXG00000033455	-	80	30.870
ENSAMXG00000033060	-	87	36.174	ENSAMXG00000038047	-	79	36.312
ENSAMXG00000033060	-	73	33.787	ENSAMXG00000038483	-	65	33.787
ENSAMXG00000033060	-	87	37.536	ENSAMXG00000040526	-	86	37.440

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033060	-	76	33.952	ENSAPEG00000000438	-	99	33.952	Amphiprion_percula
ENSAMXG00000033060	-	87	30.306	ENSACLG00000003782	-	75	30.306	Astatotilapia_calliptera
ENSAMXG00000033060	-	53	37.599	ENSACLG00000005138	-	70	38.281	Astatotilapia_calliptera
ENSAMXG00000033060	-	87	34.981	ENSACLG00000014318	-	76	35.099	Astatotilapia_calliptera
ENSAMXG00000033060	-	81	35.166	ENSBTAG00000052165	-	94	35.434	Bos_taurus
ENSAMXG00000033060	-	80	41.102	ENSCPBG00000009184	-	99	41.102	Chrysemys_picta_bellii
ENSAMXG00000033060	-	64	35.733	ENSCPBG00000009921	-	97	35.733	Chrysemys_picta_bellii
ENSAMXG00000033060	-	87	30.248	ENSCSEG00000011566	-	82	30.248	Cynoglossus_semilaevis
ENSAMXG00000033060	-	87	30.248	ENSCSEG00000009059	-	82	30.248	Cynoglossus_semilaevis
ENSAMXG00000033060	-	80	37.734	ENSCSEG00000019226	-	53	37.734	Cynoglossus_semilaevis
ENSAMXG00000033060	-	87	30.248	ENSCSEG00000012922	-	82	30.248	Cynoglossus_semilaevis
ENSAMXG00000033060	-	87	30.248	ENSCSEG00000013867	-	82	30.248	Cynoglossus_semilaevis
ENSAMXG00000033060	-	87	30.248	ENSCSEG00000018136	-	82	30.248	Cynoglossus_semilaevis
ENSAMXG00000033060	-	86	34.132	ENSECAG00000034459	-	93	34.132	Equus_caballus
ENSAMXG00000033060	-	74	35.561	ENSGALG00000053504	-	93	35.561	Gallus_gallus
ENSAMXG00000033060	-	74	36.580	ENSGALG00000050905	-	93	36.580	Gallus_gallus
ENSAMXG00000033060	-	87	40.812	ENSLBEG00000013565	-	75	40.812	Labrus_bergylta
ENSAMXG00000033060	-	70	38.164	ENSMODG00000027851	-	97	38.164	Monodelphis_domestica
ENSAMXG00000033060	-	93	36.163	ENSMODG00000028385	-	99	36.163	Monodelphis_domestica
ENSAMXG00000033060	-	52	36.102	ENSMODG00000029391	-	99	36.102	Monodelphis_domestica
ENSAMXG00000033060	-	61	36.997	ENSMODG00000029647	-	94	36.997	Monodelphis_domestica
ENSAMXG00000033060	-	52	36.422	ENSMODG00000028221	-	99	36.422	Monodelphis_domestica
ENSAMXG00000033060	-	91	36.445	ENSMODG00000029722	-	99	36.445	Monodelphis_domestica
ENSAMXG00000033060	-	60	37.465	ENSMODG00000028191	-	99	37.465	Monodelphis_domestica
ENSAMXG00000033060	-	52	36.422	ENSMODG00000028121	-	99	36.422	Monodelphis_domestica
ENSAMXG00000033060	-	93	36.251	ENSMODG00000028573	-	99	36.251	Monodelphis_domestica
ENSAMXG00000033060	-	50	40.672	ENSMODG00000028325	-	92	40.672	Monodelphis_domestica
ENSAMXG00000033060	-	52	36.102	ENSMODG00000029294	-	99	36.102	Monodelphis_domestica
ENSAMXG00000033060	-	68	37.215	ENSMODG00000029316	-	99	37.215	Monodelphis_domestica
ENSAMXG00000033060	-	97	35.702	ENSMODG00000027428	-	94	35.702	Monodelphis_domestica
ENSAMXG00000033060	-	76	33.441	ENSMODG00000028504	-	99	33.441	Monodelphis_domestica
ENSAMXG00000033060	-	51	39.434	ENSMODG00000028815	-	95	39.434	Monodelphis_domestica
ENSAMXG00000033060	-	60	37.887	ENSMODG00000029516	-	99	37.887	Monodelphis_domestica
ENSAMXG00000033060	-	63	38.645	ENSMODG00000027664	-	98	38.645	Monodelphis_domestica
ENSAMXG00000033060	-	94	36.507	ENSMODG00000027661	-	97	36.681	Monodelphis_domestica
ENSAMXG00000033060	-	50	35.607	ENSMODG00000027863	-	99	35.607	Monodelphis_domestica
ENSAMXG00000033060	-	52	36.262	ENSMODG00000027524	-	99	36.262	Monodelphis_domestica
ENSAMXG00000033060	-	66	37.699	ENSMODG00000027448	-	99	37.699	Monodelphis_domestica
ENSAMXG00000033060	-	60	38.493	ENSMODG00000028686	-	100	38.493	Monodelphis_domestica
ENSAMXG00000033060	-	93	36.428	ENSMODG00000029698	-	99	36.428	Monodelphis_domestica
ENSAMXG00000033060	-	60	37.606	ENSMODG00000027329	-	99	37.606	Monodelphis_domestica
ENSAMXG00000033060	-	60	37.606	ENSMODG00000029806	-	99	37.606	Monodelphis_domestica
ENSAMXG00000033060	-	91	36.061	ENSMODG00000029740	-	99	36.061	Monodelphis_domestica
ENSAMXG00000033060	-	93	36.251	ENSMODG00000027641	-	99	36.251	Monodelphis_domestica
ENSAMXG00000033060	-	61	39.197	ENSMODG00000028692	-	98	39.197	Monodelphis_domestica
ENSAMXG00000033060	-	62	33.832	ENSONIG00000021274	-	99	33.832	Oreochromis_niloticus
ENSAMXG00000033060	-	82	30.644	ENSONIG00000021180	-	80	30.644	Oreochromis_niloticus
ENSAMXG00000033060	-	84	31.194	ENSORLG00020007796	-	65	31.386	Oryzias_latipes_hni
ENSAMXG00000033060	-	74	38.618	ENSOMEG00000005516	-	98	38.626	Oryzias_melastigma
ENSAMXG00000033060	-	87	37.548	ENSOMEG00000021132	-	76	37.825	Oryzias_melastigma
ENSAMXG00000033060	-	55	37.261	ENSOARG00000015221	-	80	37.261	Ovis_aries
ENSAMXG00000033060	-	56	36.850	ENSOARG00000015892	-	82	36.850	Ovis_aries
ENSAMXG00000033060	-	65	35.242	ENSOARG00000014856	-	82	35.242	Ovis_aries
ENSAMXG00000033060	-	57	35.530	ENSOARG00000001648	-	95	35.530	Ovis_aries
ENSAMXG00000033060	-	65	35.369	ENSOARG00000009849	-	81	35.369	Ovis_aries
ENSAMXG00000033060	-	85	36.141	ENSPSIG00000001866	-	89	36.035	Pelodiscus_sinensis
ENSAMXG00000033060	-	93	31.250	ENSPSIG00000012903	-	94	31.250	Pelodiscus_sinensis
ENSAMXG00000033060	-	61	30.287	ENSPSIG00000000079	-	99	30.287	Pelodiscus_sinensis
ENSAMXG00000033060	-	65	30.435	ENSPSIG00000000387	-	99	30.807	Pelodiscus_sinensis
ENSAMXG00000033060	-	85	37.132	ENSSSCG00000034853	-	86	37.721	Sus_scrofa
ENSAMXG00000033060	-	87	33.430	ENSXMAG00000022532	-	74	33.430	Xiphophorus_maculatus