EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000033077 (Gene tree)
Gene ID: 103029346
Gene Symbol: mrpl1
Alias: si:dkey-58f10.1
Full Name: mitochondrial ribosomal protein L1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 12168 bases
Position: chrAPWO02000029.1:1768372-1780539
Accession: 103029346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000033356	Ribosomal_L1	PF00687.21	6.7e-22	1	1
ENSAMXP00000053734	Ribosomal_L1	PF00687.21	1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000041227	-	5362	XM_015602835	ENSAMXP00000033356	340 (aa)	XP_015458321	W5KNN4
ENSAMXT00000047044	-	4963	-	ENSAMXP00000053734	397 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033077's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033077's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033077	mrpl1	74	47.843	ENSG00000169288	MRPL1	90	47.393	Homo_sapiens
ENSAMXG00000033077	mrpl1	99	52.959	ENSAPOG00000005831	mrpl1	82	61.719	Acanthochromis_polyacanthus
ENSAMXG00000033077	mrpl1	93	58.228	ENSACIG00000002298	mrpl1	86	64.591	Amphilophus_citrinellus
ENSAMXG00000033077	mrpl1	74	63.492	ENSAOCG00000006715	mrpl1	82	62.500	Amphiprion_ocellaris
ENSAMXG00000033077	mrpl1	74	63.889	ENSAPEG00000020020	mrpl1	85	63.889	Amphiprion_percula
ENSAMXG00000033077	mrpl1	99	56.176	ENSATEG00000008760	mrpl1	99	54.277	Anabas_testudineus
ENSAMXG00000033077	mrpl1	64	53.670	ENSAPLG00000003428	MRPL1	85	52.361	Anas_platyrhynchos
ENSAMXG00000033077	mrpl1	85	43.986	ENSACAG00000012069	MRPL1	61	48.729	Anolis_carolinensis
ENSAMXG00000033077	mrpl1	68	41.991	ENSANAG00000020317	-	74	41.991	Aotus_nancymaae
ENSAMXG00000033077	mrpl1	99	41.298	ENSANAG00000035463	-	80	44.788	Aotus_nancymaae
ENSAMXG00000033077	mrpl1	99	57.522	ENSACLG00000001464	mrpl1	95	53.261	Astatotilapia_calliptera
ENSAMXG00000033077	mrpl1	99	42.899	ENSCPOG00000031686	MRPL1	79	45.914	Cavia_porcellus
ENSAMXG00000033077	mrpl1	76	44.828	ENSCLAG00000005041	MRPL1	80	44.828	Chinchilla_lanigera
ENSAMXG00000033077	mrpl1	99	39.296	ENSCANG00000033966	MRPL1	79	42.529	Colobus_angolensis_palliatus
ENSAMXG00000033077	mrpl1	99	43.953	ENSCGRG00001005376	-	79	47.490	Cricetulus_griseus_chok1gshd
ENSAMXG00000033077	mrpl1	99	43.658	ENSCGRG00000003658	-	79	47.104	Cricetulus_griseus_crigri
ENSAMXG00000033077	mrpl1	99	49.552	ENSCSEG00000014014	mrpl1	99	48.387	Cynoglossus_semilaevis
ENSAMXG00000033077	mrpl1	98	57.485	ENSCVAG00000021636	mrpl1	81	64.231	Cyprinodon_variegatus
ENSAMXG00000033077	mrpl1	99	59.706	ENSDARG00000054606	mrpl1	98	59.064	Danio_rerio
ENSAMXG00000033077	mrpl1	99	42.478	ENSDNOG00000001665	MRPL1	79	48.649	Dasypus_novemcinctus
ENSAMXG00000033077	mrpl1	99	41.159	ENSDORG00000015752	Mrpl1	77	45.211	Dipodomys_ordii
ENSAMXG00000033077	mrpl1	99	36.550	ENSEBUG00000004815	mrpl1	78	42.023	Eptatretus_burgeri
ENSAMXG00000033077	mrpl1	99	58.160	ENSELUG00000013391	mrpl1	99	57.864	Esox_lucius
ENSAMXG00000033077	mrpl1	99	42.773	ENSFCAG00000013776	MRPL1	80	46.718	Felis_catus
ENSAMXG00000033077	mrpl1	75	49.213	ENSFALG00000008527	MRPL1	88	49.213	Ficedula_albicollis
ENSAMXG00000033077	mrpl1	73	45.382	ENSFDAG00000011113	MRPL1	78	44.531	Fukomys_damarensis
ENSAMXG00000033077	mrpl1	98	54.790	ENSFHEG00000012375	mrpl1	98	55.090	Fundulus_heteroclitus
ENSAMXG00000033077	mrpl1	85	45.704	ENSGALG00000010324	MRPL1	80	47.566	Gallus_gallus
ENSAMXG00000033077	mrpl1	99	54.277	ENSGAFG00000006089	mrpl1	86	54.252	Gambusia_affinis
ENSAMXG00000033077	mrpl1	86	51.877	ENSGAGG00000015092	MRPL1	73	57.143	Gopherus_agassizii
ENSAMXG00000033077	mrpl1	74	47.843	ENSGGOG00000001304	MRPL1	80	47.126	Gorilla_gorilla
ENSAMXG00000033077	mrpl1	99	57.227	ENSHBUG00000004985	mrpl1	99	56.637	Haplochromis_burtoni
ENSAMXG00000033077	mrpl1	74	46.275	ENSHGLG00000006127	MRPL1	81	45.594	Heterocephalus_glaber_female
ENSAMXG00000033077	mrpl1	74	46.275	ENSHGLG00100004303	MRPL1	81	45.594	Heterocephalus_glaber_male
ENSAMXG00000033077	mrpl1	74	80.800	ENSIPUG00000009866	mrpl1	88	80.156	Ictalurus_punctatus
ENSAMXG00000033077	mrpl1	74	47.431	ENSSTOG00000001415	MRPL1	80	46.718	Ictidomys_tridecemlineatus
ENSAMXG00000033077	mrpl1	86	44.407	ENSJJAG00000012571	Mrpl1	80	46.332	Jaculus_jaculus
ENSAMXG00000033077	mrpl1	98	53.134	ENSKMAG00000004236	mrpl1	99	52.836	Kryptolebias_marmoratus
ENSAMXG00000033077	mrpl1	72	56.557	ENSLBEG00000013686	-	83	56.000	Labrus_bergylta
ENSAMXG00000033077	mrpl1	89	53.974	ENSLBEG00000017454	-	90	53.642	Labrus_bergylta
ENSAMXG00000033077	mrpl1	99	51.479	ENSLACG00000008208	MRPL1	79	58.915	Latimeria_chalumnae
ENSAMXG00000033077	mrpl1	98	54.491	ENSLOCG00000007408	mrpl1	81	62.791	Lepisosteus_oculatus
ENSAMXG00000033077	mrpl1	86	42.321	ENSMLEG00000030203	MRPL1	91	45.211	Mandrillus_leucophaeus
ENSAMXG00000033077	mrpl1	98	58.084	ENSMAMG00000016943	mrpl1	98	56.587	Mastacembelus_armatus
ENSAMXG00000033077	mrpl1	99	57.522	ENSMZEG00005020288	mrpl1	99	56.342	Maylandia_zebra
ENSAMXG00000033077	mrpl1	64	51.835	ENSMGAG00000005136	MRPL1	94	47.510	Meleagris_gallopavo
ENSAMXG00000033077	mrpl1	78	36.194	ENSMAUG00000019228	Mrpl1	89	36.680	Mesocricetus_auratus
ENSAMXG00000033077	mrpl1	65	49.554	ENSMICG00000032729	-	87	49.554	Microcebus_murinus
ENSAMXG00000033077	mrpl1	99	42.941	ENSMOCG00000017395	Mrpl1	81	46.591	Microtus_ochrogaster
ENSAMXG00000033077	mrpl1	73	43.254	ENSMODG00000011704	MRPL1	88	44.048	Monodelphis_domestica
ENSAMXG00000033077	mrpl1	99	55.588	ENSMALG00000006393	mrpl1	100	54.706	Monopterus_albus
ENSAMXG00000033077	mrpl1	98	42.941	ENSMUSG00000029486	Mrpl1	79	46.591	Mus_musculus
ENSAMXG00000033077	mrpl1	98	45.238	MGP_PahariEiJ_G0017208	Mrpl1	79	48.485	Mus_pahari
ENSAMXG00000033077	mrpl1	98	42.478	MGP_SPRETEiJ_G0028427	Mrpl1	79	46.591	Mus_spretus
ENSAMXG00000033077	mrpl1	69	47.899	ENSMPUG00000006794	MRPL1	75	47.131	Mustela_putorius_furo
ENSAMXG00000033077	mrpl1	73	49.600	ENSNGAG00000015669	Mrpl1	81	48.828	Nannospalax_galili
ENSAMXG00000033077	mrpl1	98	59.337	ENSNBRG00000016660	mrpl1	97	58.133	Neolamprologus_brichardi
ENSAMXG00000033077	mrpl1	76	45.211	ENSODEG00000004206	MRPL1	81	45.211	Octodon_degus
ENSAMXG00000033077	mrpl1	99	58.944	ENSONIG00000014024	mrpl1	100	57.391	Oreochromis_niloticus
ENSAMXG00000033077	mrpl1	76	45.385	ENSOANG00000003564	MRPL1	92	44.402	Ornithorhynchus_anatinus
ENSAMXG00000033077	mrpl1	74	48.221	ENSOCUG00000003852	MRPL1	79	47.860	Oryctolagus_cuniculus
ENSAMXG00000033077	mrpl1	99	55.621	ENSORLG00000018859	mrpl1	78	63.672	Oryzias_latipes
ENSAMXG00000033077	mrpl1	99	53.254	ENSOMEG00000010049	mrpl1	80	61.719	Oryzias_melastigma
ENSAMXG00000033077	mrpl1	73	46.614	ENSOGAG00000012126	MRPL1	86	46.743	Otolemur_garnettii
ENSAMXG00000033077	mrpl1	74	47.843	ENSPPAG00000041378	MRPL1	80	47.126	Pan_paniscus
ENSAMXG00000033077	mrpl1	99	42.773	ENSPPRG00000009221	MRPL1	80	46.718	Panthera_pardus
ENSAMXG00000033077	mrpl1	99	42.773	ENSPTIG00000015465	MRPL1	80	46.718	Panthera_tigris_altaica
ENSAMXG00000033077	mrpl1	74	47.843	ENSPTRG00000016199	MRPL1	80	47.126	Pan_troglodytes
ENSAMXG00000033077	mrpl1	76	45.211	ENSPANG00000007832	MRPL1	81	45.211	Papio_anubis
ENSAMXG00000033077	mrpl1	99	51.917	ENSPKIG00000019299	mrpl1	78	59.922	Paramormyrops_kingsleyae
ENSAMXG00000033077	mrpl1	61	56.522	ENSPSIG00000015906	MRPL1	93	56.522	Pelodiscus_sinensis
ENSAMXG00000033077	mrpl1	72	63.306	ENSPMGG00000004020	mrpl1	79	62.016	Periophthalmus_magnuspinnatus
ENSAMXG00000033077	mrpl1	99	44.379	ENSPEMG00000018072	-	81	47.876	Peromyscus_maniculatus_bairdii
ENSAMXG00000033077	mrpl1	72	44.177	ENSPCIG00000029496	-	81	43.019	Phascolarctos_cinereus
ENSAMXG00000033077	mrpl1	99	53.982	ENSPFOG00000013095	mrpl1	98	53.982	Poecilia_formosa
ENSAMXG00000033077	mrpl1	99	53.687	ENSPLAG00000019871	mrpl1	99	53.687	Poecilia_latipinna
ENSAMXG00000033077	mrpl1	99	53.687	ENSPMEG00000015846	mrpl1	99	53.687	Poecilia_mexicana
ENSAMXG00000033077	mrpl1	98	54.192	ENSPREG00000003524	mrpl1	98	54.192	Poecilia_reticulata
ENSAMXG00000033077	mrpl1	74	47.059	ENSPPYG00000014870	MRPL1	80	46.360	Pongo_abelii
ENSAMXG00000033077	mrpl1	99	57.522	ENSPNYG00000006464	mrpl1	99	55.977	Pundamilia_nyererei
ENSAMXG00000033077	mrpl1	99	73.731	ENSPNAG00000018662	mrpl1	98	73.252	Pygocentrus_nattereri
ENSAMXG00000033077	mrpl1	72	48.387	ENSRNOG00000002070	Mrpl1	83	46.992	Rattus_norvegicus
ENSAMXG00000033077	mrpl1	74	47.431	ENSRNOG00000045785	LOC100359687	85	46.992	Rattus_norvegicus
ENSAMXG00000033077	mrpl1	99	41.935	ENSRBIG00000040801	MRPL1	81	45.977	Rhinopithecus_bieti
ENSAMXG00000033077	mrpl1	99	41.935	ENSRROG00000041586	MRPL1	81	45.977	Rhinopithecus_roxellana
ENSAMXG00000033077	mrpl1	99	41.349	ENSSHAG00000001696	MRPL1	77	45.817	Sarcophilus_harrisii
ENSAMXG00000033077	mrpl1	98	53.892	ENSSFOG00015014444	mrpl1	76	62.698	Scleropages_formosus
ENSAMXG00000033077	mrpl1	98	55.988	ENSSMAG00000015530	mrpl1	97	55.689	Scophthalmus_maximus
ENSAMXG00000033077	mrpl1	98	55.689	ENSSDUG00000018458	mrpl1	98	55.389	Seriola_dumerili
ENSAMXG00000033077	mrpl1	98	55.689	ENSSLDG00000000399	mrpl1	97	52.646	Seriola_lalandi_dorsalis
ENSAMXG00000033077	mrpl1	68	52.814	ENSSPUG00000002005	MRPL1	76	53.043	Sphenodon_punctatus
ENSAMXG00000033077	mrpl1	91	51.299	ENSSPAG00000022922	mrpl1	87	51.299	Stegastes_partitus
ENSAMXG00000033077	mrpl1	68	50.870	ENSTGUG00000001739	MRPL1	81	48.473	Taeniopygia_guttata
ENSAMXG00000033077	mrpl1	98	53.916	ENSTRUG00000004229	mrpl1	99	53.687	Takifugu_rubripes
ENSAMXG00000033077	mrpl1	99	55.000	ENSTNIG00000016716	mrpl1	92	64.202	Tetraodon_nigroviridis
ENSAMXG00000033077	mrpl1	76	46.743	ENSUMAG00000007973	MRPL1	96	46.743	Ursus_maritimus
ENSAMXG00000033077	mrpl1	99	53.687	ENSXETG00000000373	mrpl1	74	61.176	Xenopus_tropicalis
ENSAMXG00000033077	mrpl1	98	55.255	ENSXMAG00000002920	mrpl1	98	56.156	Xiphophorus_maculatus