EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033117 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7538 bases
Position: chrAPWO02001832.1:6643-14180
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036243	MMR_HSR1	PF01926.23	7.8e-12	1	1
ENSAMXP00000031146	MMR_HSR1	PF01926.23	2.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047668	-	3030	-	ENSAMXP00000031146	233 (aa)	-	-
ENSAMXT00000048930	-	1890	-	ENSAMXP00000036243	589 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033117's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033117	-	98	87.281	ENSAMXG00000006064	-	92	77.075
ENSAMXG00000033117	-	81	30.769	ENSAMXG00000042278	-	79	30.769
ENSAMXG00000033117	-	63	39.062	ENSAMXG00000031520	-	58	39.062
ENSAMXG00000033117	-	69	35.789	ENSAMXG00000035792	-	79	35.789
ENSAMXG00000033117	-	72	32.749	ENSAMXG00000038000	-	61	32.353
ENSAMXG00000033117	-	79	34.759	ENSAMXG00000043471	-	69	38.624
ENSAMXG00000033117	-	69	32.821	ENSAMXG00000030288	-	66	32.821
ENSAMXG00000033117	-	85	31.633	ENSAMXG00000036317	-	95	30.882
ENSAMXG00000033117	-	79	32.620	ENSAMXG00000041148	-	77	36.413
ENSAMXG00000033117	-	82	31.795	ENSAMXG00000041969	si:ch1073-185p12.2	74	36.316
ENSAMXG00000033117	-	84	33.333	ENSAMXG00000015575	-	74	39.378
ENSAMXG00000033117	-	64	33.690	ENSAMXG00000026085	-	89	31.925
ENSAMXG00000033117	-	97	38.961	ENSAMXG00000019109	-	97	39.568
ENSAMXG00000033117	-	63	35.938	ENSAMXG00000040298	-	78	35.938
ENSAMXG00000033117	-	66	30.928	ENSAMXG00000038358	-	65	30.928
ENSAMXG00000033117	-	62	32.308	ENSAMXG00000037808	-	70	32.308
ENSAMXG00000033117	-	99	41.711	ENSAMXG00000021387	-	91	41.622
ENSAMXG00000033117	-	63	33.838	ENSAMXG00000032489	-	61	32.743
ENSAMXG00000033117	-	66	37.113	ENSAMXG00000033160	-	92	37.113
ENSAMXG00000033117	-	71	35.323	ENSAMXG00000036272	-	84	32.749
ENSAMXG00000033117	-	99	30.159	ENSAMXG00000032368	-	91	33.668
ENSAMXG00000033117	-	52	30.114	ENSAMXG00000030826	-	84	30.114
ENSAMXG00000033117	-	69	32.984	ENSAMXG00000033324	-	62	32.984
ENSAMXG00000033117	-	84	33.831	ENSAMXG00000013450	-	58	38.587
ENSAMXG00000033117	-	80	30.890	ENSAMXG00000043776	-	68	34.872
ENSAMXG00000033117	-	84	32.836	ENSAMXG00000038335	-	88	38.333
ENSAMXG00000033117	-	60	35.484	ENSAMXG00000031923	-	71	35.484
ENSAMXG00000033117	-	63	39.153	ENSAMXG00000037798	-	62	39.153
ENSAMXG00000033117	-	63	31.579	ENSAMXG00000036745	-	64	31.579
ENSAMXG00000033117	-	99	30.000	ENSAMXG00000038070	-	97	33.484
ENSAMXG00000033117	-	69	34.314	ENSAMXG00000035878	-	97	34.314
ENSAMXG00000033117	-	55	32.571	ENSAMXG00000043950	-	82	32.571
ENSAMXG00000033117	-	87	32.075	ENSAMXG00000032276	-	50	40.212
ENSAMXG00000033117	-	60	30.345	ENSAMXG00000042475	-	89	34.694
ENSAMXG00000033117	-	84	32.836	ENSAMXG00000029731	-	84	37.634
ENSAMXG00000033117	-	69	30.769	ENSAMXG00000036435	-	91	30.769
ENSAMXG00000033117	-	69	32.500	ENSAMXG00000037741	-	89	32.500
ENSAMXG00000033117	-	63	32.812	ENSAMXG00000030926	-	63	32.812
ENSAMXG00000033117	-	65	36.316	ENSAMXG00000032381	-	64	37.368
ENSAMXG00000033117	-	57	33.824	ENSAMXG00000038694	-	89	36.842
ENSAMXG00000033117	-	55	36.735	ENSAMXG00000040863	-	90	36.735
ENSAMXG00000033117	-	62	35.263	ENSAMXG00000032601	zgc:165583	60	35.263
ENSAMXG00000033117	-	73	34.802	ENSAMXG00000012113	-	75	34.802
ENSAMXG00000033117	-	68	34.921	ENSAMXG00000037101	zgc:113625	80	34.921
ENSAMXG00000033117	-	65	35.263	ENSAMXG00000041240	-	83	35.263
ENSAMXG00000033117	-	77	30.601	ENSAMXG00000002402	-	86	33.953
ENSAMXG00000033117	-	62	38.624	ENSAMXG00000013799	-	77	38.624
ENSAMXG00000033117	-	91	32.883	ENSAMXG00000007079	-	83	40.000
ENSAMXG00000033117	-	62	37.234	ENSAMXG00000031086	-	88	37.234
ENSAMXG00000033117	-	83	30.964	ENSAMXG00000030472	-	82	37.696
ENSAMXG00000033117	-	54	34.270	ENSAMXG00000031683	-	99	34.270
ENSAMXG00000033117	-	98	30.894	ENSAMXG00000031962	-	81	38.071
ENSAMXG00000033117	-	62	36.000	ENSAMXG00000031180	-	89	36.000
ENSAMXG00000033117	-	70	31.548	ENSAMXG00000031181	-	60	37.952
ENSAMXG00000033117	-	69	37.306	ENSAMXG00000030501	-	74	37.306
ENSAMXG00000033117	-	79	30.319	ENSAMXG00000040708	-	68	37.766
ENSAMXG00000033117	-	97	40.291	ENSAMXG00000030744	-	93	40.498
ENSAMXG00000033117	-	69	33.161	ENSAMXG00000024933	-	80	33.161
ENSAMXG00000033117	-	67	33.508	ENSAMXG00000021622	-	87	33.508
ENSAMXG00000033117	-	80	30.570	ENSAMXG00000032951	-	85	32.275
ENSAMXG00000033117	-	68	31.746	ENSAMXG00000039735	-	73	31.746
ENSAMXG00000033117	-	80	31.720	ENSAMXG00000035925	-	93	33.484
ENSAMXG00000033117	-	88	31.925	ENSAMXG00000030159	-	81	32.787
ENSAMXG00000033117	-	81	32.812	ENSAMXG00000038930	-	70	32.275
ENSAMXG00000033117	-	68	36.788	ENSAMXG00000026503	-	92	36.788
ENSAMXG00000033117	-	66	35.751	ENSAMXG00000037647	-	90	35.751
ENSAMXG00000033117	-	56	30.508	ENSAMXG00000042238	-	58	30.508
ENSAMXG00000033117	-	63	33.854	ENSAMXG00000042454	-	58	33.854
ENSAMXG00000033117	-	80	32.124	ENSAMXG00000035963	-	75	30.736
ENSAMXG00000033117	-	84	32.353	ENSAMXG00000002562	-	90	36.979
ENSAMXG00000033117	-	64	31.937	ENSAMXG00000042243	-	86	31.937
ENSAMXG00000033117	-	82	31.122	ENSAMXG00000006341	-	82	33.673
ENSAMXG00000033117	-	87	33.121	ENSAMXG00000033190	-	75	33.668
ENSAMXG00000033117	-	82	30.457	ENSAMXG00000013452	-	72	40.102
ENSAMXG00000033117	-	55	32.738	ENSAMXG00000041745	-	77	32.738
ENSAMXG00000033117	-	79	31.579	ENSAMXG00000031309	-	81	34.762
ENSAMXG00000033117	-	64	34.872	ENSAMXG00000029396	-	69	34.872
ENSAMXG00000033117	-	73	32.571	ENSAMXG00000031676	-	100	34.857
ENSAMXG00000033117	-	72	32.547	ENSAMXG00000035621	-	96	32.547
ENSAMXG00000033117	-	77	32.065	ENSAMXG00000035161	-	67	33.019
ENSAMXG00000033117	-	85	32.836	ENSAMXG00000038457	-	93	31.731
ENSAMXG00000033117	-	84	32.836	ENSAMXG00000033886	-	85	38.333
ENSAMXG00000033117	-	63	35.979	ENSAMXG00000042848	-	83	35.979
ENSAMXG00000033117	-	52	30.366	ENSAMXG00000039994	-	63	30.052
ENSAMXG00000033117	-	68	31.217	ENSAMXG00000010267	-	78	31.217
ENSAMXG00000033117	-	77	30.043	ENSAMXG00000041141	-	86	30.043
ENSAMXG00000033117	-	75	32.759	ENSAMXG00000009216	-	89	37.838

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033117	-	96	37.333	ENSAPOG00000019154	-	67	36.797	Acanthochromis_polyacanthus
ENSAMXG00000033117	-	98	34.649	ENSAPOG00000006502	-	63	31.641	Acanthochromis_polyacanthus
ENSAMXG00000033117	-	81	34.921	ENSACIG00000009811	-	80	42.162	Amphilophus_citrinellus
ENSAMXG00000033117	-	85	42.500	ENSACIG00000007725	-	81	42.564	Amphilophus_citrinellus
ENSAMXG00000033117	-	75	30.857	ENSACIG00000007737	-	78	37.624	Amphilophus_citrinellus
ENSAMXG00000033117	-	78	30.939	ENSAOCG00000003425	-	67	41.436	Amphiprion_ocellaris
ENSAMXG00000033117	-	97	39.594	ENSAOCG00000004579	-	91	47.573	Amphiprion_ocellaris
ENSAMXG00000033117	-	94	39.378	ENSAPEG00000014403	-	77	38.961	Amphiprion_percula
ENSAMXG00000033117	-	97	37.333	ENSAPEG00000001491	-	68	39.277	Amphiprion_percula
ENSAMXG00000033117	-	91	38.679	ENSATEG00000023053	-	93	38.679	Anabas_testudineus
ENSAMXG00000033117	-	97	39.556	ENSATEG00000015654	-	83	39.768	Anabas_testudineus
ENSAMXG00000033117	-	97	37.778	ENSACLG00000014795	-	82	50.262	Astatotilapia_calliptera
ENSAMXG00000033117	-	97	36.574	ENSCSEG00000021519	-	92	34.321	Cynoglossus_semilaevis
ENSAMXG00000033117	-	98	34.934	ENSCVAG00000003054	-	90	34.862	Cyprinodon_variegatus
ENSAMXG00000033117	-	83	36.364	ENSCVAG00000005778	-	81	36.250	Cyprinodon_variegatus
ENSAMXG00000033117	-	94	34.667	ENSCVAG00000012268	-	94	36.364	Cyprinodon_variegatus
ENSAMXG00000033117	-	86	41.791	ENSDARG00000102683	CR626941.1	76	41.791	Danio_rerio
ENSAMXG00000033117	-	97	38.942	ENSDARG00000063481	si:ch211-214j24.15	68	38.587	Danio_rerio
ENSAMXG00000033117	-	82	33.333	ENSELUG00000003217	-	82	32.663	Esox_lucius
ENSAMXG00000033117	-	93	39.450	ENSELUG00000024502	-	69	52.151	Esox_lucius
ENSAMXG00000033117	-	88	33.654	ENSELUG00000018709	-	71	35.398	Esox_lucius
ENSAMXG00000033117	-	82	38.421	ENSELUG00000018192	-	100	50.237	Esox_lucius
ENSAMXG00000033117	-	79	32.787	ENSFHEG00000020783	-	97	39.130	Fundulus_heteroclitus
ENSAMXG00000033117	-	78	39.247	ENSFHEG00000023334	-	73	39.560	Fundulus_heteroclitus
ENSAMXG00000033117	-	84	32.512	ENSGMOG00000001626	-	100	40.000	Gadus_morhua
ENSAMXG00000033117	-	78	35.955	ENSGAFG00000020826	-	98	33.514	Gambusia_affinis
ENSAMXG00000033117	-	85	37.755	ENSHBUG00000008326	-	100	36.715	Haplochromis_burtoni
ENSAMXG00000033117	-	91	37.559	ENSHBUG00000016284	-	98	50.802	Haplochromis_burtoni
ENSAMXG00000033117	-	82	34.392	ENSHBUG00000001242	-	64	31.915	Haplochromis_burtoni
ENSAMXG00000033117	-	76	34.054	ENSIPUG00000013342	-	76	30.126	Ictalurus_punctatus
ENSAMXG00000033117	-	96	36.161	ENSKMAG00000014605	-	84	44.865	Kryptolebias_marmoratus
ENSAMXG00000033117	-	99	36.402	ENSKMAG00000009600	-	96	36.564	Kryptolebias_marmoratus
ENSAMXG00000033117	-	79	37.975	ENSKMAG00000014764	-	100	41.558	Kryptolebias_marmoratus
ENSAMXG00000033117	-	97	39.013	ENSKMAG00000004774	-	82	45.361	Kryptolebias_marmoratus
ENSAMXG00000033117	-	94	37.727	ENSLBEG00000019652	-	80	38.696	Labrus_bergylta
ENSAMXG00000033117	-	84	35.897	ENSLOCG00000000517	-	80	36.604	Lepisosteus_oculatus
ENSAMXG00000033117	-	83	34.715	ENSLOCG00000000082	-	91	40.408	Lepisosteus_oculatus
ENSAMXG00000033117	-	84	37.949	ENSLOCG00000018072	-	90	45.545	Lepisosteus_oculatus
ENSAMXG00000033117	-	78	39.227	ENSLOCG00000017852	-	86	43.478	Lepisosteus_oculatus
ENSAMXG00000033117	-	87	37.255	ENSLOCG00000016496	-	66	45.771	Lepisosteus_oculatus
ENSAMXG00000033117	-	84	35.897	ENSLOCG00000000385	-	85	38.783	Lepisosteus_oculatus
ENSAMXG00000033117	-	82	35.602	ENSLOCG00000012075	-	92	45.050	Lepisosteus_oculatus
ENSAMXG00000033117	-	96	37.220	ENSMAMG00000021969	-	60	37.297	Mastacembelus_armatus
ENSAMXG00000033117	-	88	34.146	ENSMAMG00000021970	-	98	34.328	Mastacembelus_armatus
ENSAMXG00000033117	-	88	41.624	ENSMAMG00000015600	-	82	43.316	Mastacembelus_armatus
ENSAMXG00000033117	-	85	34.000	ENSMMOG00000012876	-	79	42.077	Mola_mola
ENSAMXG00000033117	-	61	35.417	ENSMMOG00000016864	-	73	36.269	Mola_mola
ENSAMXG00000033117	-	98	37.719	ENSNBRG00000002136	-	79	40.000	Neolamprologus_brichardi
ENSAMXG00000033117	-	92	37.209	ENSORLG00000002031	-	72	43.077	Oryzias_latipes
ENSAMXG00000033117	-	82	34.737	ENSORLG00000028011	-	52	38.961	Oryzias_latipes
ENSAMXG00000033117	-	97	36.000	ENSORLG00000002537	-	69	35.680	Oryzias_latipes
ENSAMXG00000033117	-	92	36.744	ENSORLG00020008323	-	71	42.564	Oryzias_latipes_hni
ENSAMXG00000033117	-	97	39.035	ENSORLG00020008286	-	91	41.296	Oryzias_latipes_hni
ENSAMXG00000033117	-	96	36.916	ENSORLG00020011284	-	80	36.316	Oryzias_latipes_hni
ENSAMXG00000033117	-	80	35.106	ENSORLG00020017387	-	81	37.696	Oryzias_latipes_hni
ENSAMXG00000033117	-	74	35.632	ENSORLG00015023234	-	90	37.288	Oryzias_latipes_hsok
ENSAMXG00000033117	-	97	37.209	ENSORLG00015004522	-	70	43.077	Oryzias_latipes_hsok
ENSAMXG00000033117	-	97	36.444	ENSORLG00015004110	-	69	35.766	Oryzias_latipes_hsok
ENSAMXG00000033117	-	97	38.498	ENSOMEG00000010594	-	89	44.865	Oryzias_melastigma
ENSAMXG00000033117	-	98	36.239	ENSOMEG00000020433	-	88	36.073	Oryzias_melastigma
ENSAMXG00000033117	-	97	42.667	ENSPKIG00000017688	-	83	46.977	Paramormyrops_kingsleyae
ENSAMXG00000033117	-	84	41.327	ENSPKIG00000017193	-	86	50.794	Paramormyrops_kingsleyae
ENSAMXG00000033117	-	88	33.333	ENSPMGG00000017993	-	86	37.949	Periophthalmus_magnuspinnatus
ENSAMXG00000033117	-	95	35.426	ENSPMGG00000014056	-	88	35.321	Periophthalmus_magnuspinnatus
ENSAMXG00000033117	-	84	35.500	ENSPMGG00000014055	-	80	39.674	Periophthalmus_magnuspinnatus
ENSAMXG00000033117	-	81	36.458	ENSPFOG00000022853	-	91	34.689	Poecilia_formosa
ENSAMXG00000033117	-	97	34.361	ENSPFOG00000015875	-	93	34.898	Poecilia_formosa
ENSAMXG00000033117	-	96	34.071	ENSPFOG00000015871	-	88	33.333	Poecilia_formosa
ENSAMXG00000033117	-	99	36.923	ENSPFOG00000015865	-	95	36.557	Poecilia_formosa
ENSAMXG00000033117	-	96	35.242	ENSPFOG00000013349	-	90	33.705	Poecilia_formosa
ENSAMXG00000033117	-	96	38.426	ENSPFOG00000016787	-	96	41.570	Poecilia_formosa
ENSAMXG00000033117	-	83	34.536	ENSPFOG00000005689	si:dkey-185m8.2	69	42.077	Poecilia_formosa
ENSAMXG00000033117	-	97	36.410	ENSPFOG00000013109	-	93	35.047	Poecilia_formosa
ENSAMXG00000033117	-	96	35.450	ENSPFOG00000012732	-	87	34.956	Poecilia_formosa
ENSAMXG00000033117	-	87	33.981	ENSPFOG00000022479	-	87	38.421	Poecilia_formosa
ENSAMXG00000033117	-	79	37.838	ENSPFOG00000006124	-	98	35.165	Poecilia_formosa
ENSAMXG00000033117	-	96	35.025	ENSPFOG00000000191	-	86	39.819	Poecilia_formosa
ENSAMXG00000033117	-	86	37.158	ENSPLAG00000020776	-	96	39.111	Poecilia_latipinna
ENSAMXG00000033117	-	81	35.233	ENSPLAG00000018606	-	94	41.935	Poecilia_latipinna
ENSAMXG00000033117	-	76	37.640	ENSPLAG00000018911	-	68	38.503	Poecilia_latipinna
ENSAMXG00000033117	-	70	30.545	ENSPLAG00000018692	-	96	31.273	Poecilia_latipinna
ENSAMXG00000033117	-	81	33.333	ENSPLAG00000018664	-	84	36.364	Poecilia_latipinna
ENSAMXG00000033117	-	95	37.168	ENSPLAG00000003020	-	89	36.486	Poecilia_latipinna
ENSAMXG00000033117	-	94	35.874	ENSPMEG00000020297	-	94	39.130	Poecilia_mexicana
ENSAMXG00000033117	-	66	37.821	ENSPMEG00000010605	-	79	37.419	Poecilia_mexicana
ENSAMXG00000033117	-	88	33.173	ENSPMEG00000006334	-	86	35.587	Poecilia_mexicana
ENSAMXG00000033117	-	83	33.182	ENSPMEG00000000724	-	77	33.333	Poecilia_mexicana
ENSAMXG00000033117	-	97	38.889	ENSPMEG00000000604	-	80	42.574	Poecilia_mexicana
ENSAMXG00000033117	-	76	36.517	ENSPMEG00000018950	-	68	37.968	Poecilia_mexicana
ENSAMXG00000033117	-	97	34.934	ENSPMEG00000005912	-	81	41.315	Poecilia_mexicana
ENSAMXG00000033117	-	67	40.000	ENSPMEG00000020252	-	75	39.103	Poecilia_mexicana
ENSAMXG00000033117	-	96	37.778	ENSPREG00000001530	-	85	41.706	Poecilia_reticulata
ENSAMXG00000033117	-	97	38.426	ENSPREG00000020440	-	80	43.069	Poecilia_reticulata
ENSAMXG00000033117	-	95	33.186	ENSPREG00000001250	-	89	41.509	Poecilia_reticulata
ENSAMXG00000033117	-	97	35.526	ENSPNYG00000010004	-	86	41.667	Pundamilia_nyererei
ENSAMXG00000033117	-	95	38.919	ENSPNAG00000014932	-	93	39.419	Pygocentrus_nattereri
ENSAMXG00000033117	-	100	69.099	ENSPNAG00000013132	-	93	63.410	Pygocentrus_nattereri
ENSAMXG00000033117	-	99	71.121	ENSPNAG00000019899	-	93	71.121	Pygocentrus_nattereri
ENSAMXG00000033117	-	78	31.720	ENSPNAG00000025850	-	84	31.224	Pygocentrus_nattereri
ENSAMXG00000033117	-	97	39.111	ENSPNAG00000002097	-	92	46.032	Pygocentrus_nattereri
ENSAMXG00000033117	-	67	31.579	ENSSFOG00015002503	-	84	31.579	Scleropages_formosus
ENSAMXG00000033117	-	79	31.720	ENSSFOG00015002507	-	71	42.857	Scleropages_formosus
ENSAMXG00000033117	-	82	39.062	ENSSFOG00015002420	-	73	39.344	Scleropages_formosus
ENSAMXG00000033117	-	97	34.498	ENSSMAG00000012187	-	68	34.928	Scophthalmus_maximus
ENSAMXG00000033117	-	95	38.117	ENSSDUG00000022299	-	85	38.117	Seriola_dumerili
ENSAMXG00000033117	-	96	38.117	ENSSLDG00000005786	-	68	38.186	Seriola_lalandi_dorsalis
ENSAMXG00000033117	-	71	64.103	ENSSLDG00000009168	-	98	41.284	Seriola_lalandi_dorsalis
ENSAMXG00000033117	-	97	40.625	ENSSLDG00000010531	-	97	47.449	Seriola_lalandi_dorsalis
ENSAMXG00000033117	-	92	40.541	ENSSPAG00000015927	-	90	41.176	Stegastes_partitus
ENSAMXG00000033117	-	96	38.667	ENSSPAG00000017616	-	87	39.011	Stegastes_partitus
ENSAMXG00000033117	-	78	35.519	ENSTRUG00000018070	-	79	41.270	Takifugu_rubripes
ENSAMXG00000033117	-	95	37.054	ENSTRUG00000020422	-	76	37.054	Takifugu_rubripes
ENSAMXG00000033117	-	96	33.333	ENSTNIG00000004275	-	96	38.798	Tetraodon_nigroviridis
ENSAMXG00000033117	-	81	38.298	ENSTNIG00000004220	-	82	41.081	Tetraodon_nigroviridis
ENSAMXG00000033117	-	94	35.135	ENSXCOG00000018421	-	95	37.864	Xiphophorus_couchianus
ENSAMXG00000033117	-	83	34.021	ENSXCOG00000009005	-	89	42.162	Xiphophorus_couchianus
ENSAMXG00000033117	-	99	33.628	ENSXMAG00000023360	-	88	35.294	Xiphophorus_maculatus