EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033124 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4375 bases
Position: chrAPWO02001659.1:203518-207892
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000055016	zf-C2H2	PF00096.26	5.1e-22	1	4
ENSAMXP00000055016	zf-C2H2	PF00096.26	5.1e-22	2	4
ENSAMXP00000055016	zf-C2H2	PF00096.26	5.1e-22	3	4
ENSAMXP00000055016	zf-C2H2	PF00096.26	5.1e-22	4	4
ENSAMXP00000055016	zf-met	PF12874.7	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052813	-	690	-	ENSAMXP00000055016	229 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033124	-	55	61.972	ENSAMXG00000031646	-	78	61.972
ENSAMXG00000033124	-	55	73.196	ENSAMXG00000041128	-	87	73.196
ENSAMXG00000033124	-	55	69.524	ENSAMXG00000039162	-	88	69.524
ENSAMXG00000033124	-	57	60.563	ENSAMXG00000034402	-	92	60.563
ENSAMXG00000033124	-	55	60.000	ENSAMXG00000041650	-	85	60.000
ENSAMXG00000033124	-	65	58.209	ENSAMXG00000034958	-	97	58.209
ENSAMXG00000033124	-	56	67.213	ENSAMXG00000029109	-	85	67.213
ENSAMXG00000033124	-	64	57.042	ENSAMXG00000039752	-	89	57.042
ENSAMXG00000033124	-	80	60.448	ENSAMXG00000031794	-	99	60.448
ENSAMXG00000033124	-	63	56.296	ENSAMXG00000043178	-	71	56.296
ENSAMXG00000033124	-	57	64.925	ENSAMXG00000036762	-	93	64.925
ENSAMXG00000033124	-	55	68.235	ENSAMXG00000029828	-	94	68.235
ENSAMXG00000033124	-	63	57.282	ENSAMXG00000034857	-	65	57.282
ENSAMXG00000033124	-	65	64.286	ENSAMXG00000012604	-	96	64.286
ENSAMXG00000033124	-	55	62.687	ENSAMXG00000037326	-	90	62.687
ENSAMXG00000033124	-	58	74.713	ENSAMXG00000035920	-	91	74.713
ENSAMXG00000033124	-	63	56.250	ENSAMXG00000037709	-	88	56.250
ENSAMXG00000033124	-	57	73.333	ENSAMXG00000031501	-	88	73.333
ENSAMXG00000033124	-	51	65.672	ENSAMXG00000024978	-	92	65.672
ENSAMXG00000033124	-	56	58.095	ENSAMXG00000033201	-	95	58.095
ENSAMXG00000033124	-	55	74.699	ENSAMXG00000033500	-	92	74.699
ENSAMXG00000033124	-	72	48.246	ENSAMXG00000033252	-	97	46.667
ENSAMXG00000033124	-	60	66.667	ENSAMXG00000037143	-	95	66.667
ENSAMXG00000033124	-	66	54.861	ENSAMXG00000039408	-	97	55.224
ENSAMXG00000033124	-	55	70.476	ENSAMXG00000030742	-	97	70.476
ENSAMXG00000033124	-	86	58.333	ENSAMXG00000034096	-	78	58.333
ENSAMXG00000033124	-	66	57.042	ENSAMXG00000031844	-	97	57.042
ENSAMXG00000033124	-	56	43.448	ENSAMXG00000044096	-	67	43.448
ENSAMXG00000033124	-	63	76.042	ENSAMXG00000011804	-	90	76.042
ENSAMXG00000033124	-	62	57.143	ENSAMXG00000044110	-	90	57.143
ENSAMXG00000033124	-	56	56.338	ENSAMXG00000034344	-	82	56.338
ENSAMXG00000033124	-	57	54.745	ENSAMXG00000036257	-	90	54.745
ENSAMXG00000033124	-	53	51.456	ENSAMXG00000014745	-	81	51.456
ENSAMXG00000033124	-	65	70.833	ENSAMXG00000043251	-	98	70.833
ENSAMXG00000033124	-	67	53.488	ENSAMXG00000037382	-	72	53.488
ENSAMXG00000033124	-	55	57.746	ENSAMXG00000030963	-	52	57.746
ENSAMXG00000033124	-	68	61.940	ENSAMXG00000026142	-	94	61.940
ENSAMXG00000033124	-	59	62.676	ENSAMXG00000025965	-	96	62.676
ENSAMXG00000033124	-	55	70.755	ENSAMXG00000032212	-	86	70.755
ENSAMXG00000033124	-	56	69.167	ENSAMXG00000042774	-	91	69.167
ENSAMXG00000033124	-	68	60.563	ENSAMXG00000036233	-	87	60.563
ENSAMXG00000033124	-	55	65.094	ENSAMXG00000033013	-	81	65.094
ENSAMXG00000033124	-	72	57.639	ENSAMXG00000029960	-	95	57.639
ENSAMXG00000033124	-	65	61.194	ENSAMXG00000042633	-	97	61.194
ENSAMXG00000033124	-	84	57.746	ENSAMXG00000042938	-	97	57.746
ENSAMXG00000033124	-	65	57.639	ENSAMXG00000041609	-	99	57.639
ENSAMXG00000033124	-	55	75.000	ENSAMXG00000035809	-	99	75.000
ENSAMXG00000033124	-	67	58.647	ENSAMXG00000031496	-	92	58.647
ENSAMXG00000033124	-	62	37.143	ENSAMXG00000044034	-	61	37.143
ENSAMXG00000033124	-	72	50.588	ENSAMXG00000040198	-	51	50.588
ENSAMXG00000033124	-	66	61.481	ENSAMXG00000035690	-	75	61.481
ENSAMXG00000033124	-	56	65.385	ENSAMXG00000001626	-	95	65.385
ENSAMXG00000033124	-	58	65.714	ENSAMXG00000036849	-	91	65.714
ENSAMXG00000033124	-	77	69.091	ENSAMXG00000037717	-	97	69.091
ENSAMXG00000033124	-	89	60.150	ENSAMXG00000010078	-	98	60.150
ENSAMXG00000033124	-	65	42.636	ENSAMXG00000025761	-	98	42.636
ENSAMXG00000033124	-	56	63.810	ENSAMXG00000013274	-	100	59.677
ENSAMXG00000033124	-	65	55.970	ENSAMXG00000009563	-	98	55.970
ENSAMXG00000033124	-	57	63.366	ENSAMXG00000038324	-	73	63.366
ENSAMXG00000033124	-	55	70.755	ENSAMXG00000039879	-	97	70.755
ENSAMXG00000033124	-	59	56.338	ENSAMXG00000038280	-	91	56.338
ENSAMXG00000033124	-	69	54.225	ENSAMXG00000038284	-	94	54.225
ENSAMXG00000033124	-	63	64.948	ENSAMXG00000013492	-	96	63.542
ENSAMXG00000033124	-	56	57.944	ENSAMXG00000026143	-	85	57.944
ENSAMXG00000033124	-	68	63.235	ENSAMXG00000037760	-	100	63.235
ENSAMXG00000033124	-	70	55.000	ENSAMXG00000038905	-	98	55.000
ENSAMXG00000033124	-	68	56.338	ENSAMXG00000039700	-	97	56.338
ENSAMXG00000033124	-	55	69.524	ENSAMXG00000030530	-	98	69.524
ENSAMXG00000033124	-	55	76.042	ENSAMXG00000030911	-	65	76.042
ENSAMXG00000033124	-	67	61.268	ENSAMXG00000039182	-	69	61.268
ENSAMXG00000033124	-	56	61.905	ENSAMXG00000042593	-	92	61.905
ENSAMXG00000033124	-	55	75.000	ENSAMXG00000039744	-	99	75.000
ENSAMXG00000033124	-	64	69.159	ENSAMXG00000017959	-	97	69.159
ENSAMXG00000033124	-	55	70.833	ENSAMXG00000008613	-	96	71.000
ENSAMXG00000033124	-	59	73.958	ENSAMXG00000031489	-	91	73.958
ENSAMXG00000033124	-	55	72.917	ENSAMXG00000037885	-	96	72.917
ENSAMXG00000033124	-	55	74.138	ENSAMXG00000009558	-	93	74.138
ENSAMXG00000033124	-	74	60.563	ENSAMXG00000042275	-	99	60.563
ENSAMXG00000033124	-	55	67.619	ENSAMXG00000043291	-	54	67.619
ENSAMXG00000033124	-	70	50.476	ENSAMXG00000033299	-	72	50.476
ENSAMXG00000033124	-	57	71.429	ENSAMXG00000044028	-	96	71.429
ENSAMXG00000033124	-	59	61.364	ENSAMXG00000029878	-	97	61.364
ENSAMXG00000033124	-	65	56.934	ENSAMXG00000035683	-	98	56.934
ENSAMXG00000033124	-	62	49.541	ENSAMXG00000034333	-	84	51.546
ENSAMXG00000033124	-	51	71.910	ENSAMXG00000025455	-	99	71.910
ENSAMXG00000033124	-	63	61.111	ENSAMXG00000025452	-	99	61.111
ENSAMXG00000033124	-	63	57.042	ENSAMXG00000003002	-	96	57.042
ENSAMXG00000033124	-	55	66.667	ENSAMXG00000029518	-	52	66.667
ENSAMXG00000033124	-	58	47.222	ENSAMXG00000012589	-	82	54.206
ENSAMXG00000033124	-	57	61.905	ENSAMXG00000030659	-	69	61.905
ENSAMXG00000033124	-	55	65.882	ENSAMXG00000004610	-	95	66.667
ENSAMXG00000033124	-	57	70.833	ENSAMXG00000035145	-	64	70.833
ENSAMXG00000033124	-	79	59.722	ENSAMXG00000043423	-	91	59.722
ENSAMXG00000033124	-	71	64.179	ENSAMXG00000040212	-	94	64.179
ENSAMXG00000033124	-	63	54.861	ENSAMXG00000010805	-	97	54.861
ENSAMXG00000033124	-	58	45.882	ENSAMXG00000006669	GFI1	54	45.882
ENSAMXG00000033124	-	56	55.970	ENSAMXG00000038536	-	84	59.259
ENSAMXG00000033124	-	55	77.083	ENSAMXG00000041404	-	96	77.083
ENSAMXG00000033124	-	55	65.060	ENSAMXG00000031900	-	91	72.381
ENSAMXG00000033124	-	86	59.859	ENSAMXG00000039016	-	89	59.859
ENSAMXG00000033124	-	62	50.000	ENSAMXG00000038122	-	93	54.839
ENSAMXG00000033124	-	70	67.308	ENSAMXG00000040806	-	88	67.308
ENSAMXG00000033124	-	58	64.583	ENSAMXG00000037703	-	84	71.739
ENSAMXG00000033124	-	65	58.333	ENSAMXG00000039977	-	96	58.333
ENSAMXG00000033124	-	59	61.268	ENSAMXG00000009776	-	98	66.667
ENSAMXG00000033124	-	66	58.955	ENSAMXG00000039432	-	99	58.955
ENSAMXG00000033124	-	55	75.238	ENSAMXG00000041725	-	82	75.238
ENSAMXG00000033124	-	81	52.336	ENSAMXG00000041721	-	83	52.336
ENSAMXG00000033124	-	55	58.209	ENSAMXG00000037981	-	71	58.209
ENSAMXG00000033124	-	66	54.286	ENSAMXG00000035127	-	89	50.909
ENSAMXG00000033124	-	70	58.451	ENSAMXG00000043541	-	90	58.451
ENSAMXG00000033124	-	57	66.372	ENSAMXG00000032457	-	92	66.372
ENSAMXG00000033124	-	60	50.943	ENSAMXG00000034873	-	80	50.943
ENSAMXG00000033124	-	54	58.865	ENSAMXG00000042167	-	95	58.865
ENSAMXG00000033124	-	58	37.143	ENSAMXG00000029059	-	64	37.903
ENSAMXG00000033124	-	57	55.118	ENSAMXG00000043302	-	72	55.118
ENSAMXG00000033124	-	58	61.268	ENSAMXG00000035949	-	71	61.268
ENSAMXG00000033124	-	57	46.667	ENSAMXG00000034934	-	87	46.667
ENSAMXG00000033124	-	84	55.634	ENSAMXG00000039770	-	91	55.634
ENSAMXG00000033124	-	56	55.224	ENSAMXG00000042746	-	84	58.333
ENSAMXG00000033124	-	72	62.037	ENSAMXG00000036241	-	91	62.037
ENSAMXG00000033124	-	82	61.682	ENSAMXG00000036915	-	94	68.571
ENSAMXG00000033124	-	59	59.859	ENSAMXG00000032619	-	98	59.859
ENSAMXG00000033124	-	58	63.441	ENSAMXG00000043019	-	88	63.441
ENSAMXG00000033124	-	65	69.903	ENSAMXG00000040630	-	99	68.571
ENSAMXG00000033124	-	62	54.762	ENSAMXG00000029783	-	87	53.435
ENSAMXG00000033124	-	62	56.190	ENSAMXG00000029660	-	51	56.190
ENSAMXG00000033124	-	72	60.140	ENSAMXG00000040677	-	90	60.140
ENSAMXG00000033124	-	70	61.972	ENSAMXG00000041975	-	92	61.972
ENSAMXG00000033124	-	67	60.150	ENSAMXG00000037923	-	99	63.415
ENSAMXG00000033124	-	75	71.429	ENSAMXG00000029178	-	96	71.429
ENSAMXG00000033124	-	55	68.571	ENSAMXG00000039004	-	88	68.571
ENSAMXG00000033124	-	57	69.136	ENSAMXG00000007092	-	98	75.701
ENSAMXG00000033124	-	55	72.381	ENSAMXG00000000353	-	88	72.381
ENSAMXG00000033124	-	76	43.478	ENSAMXG00000007973	-	91	52.381
ENSAMXG00000033124	-	56	71.875	ENSAMXG00000038636	-	97	71.875
ENSAMXG00000033124	-	72	58.451	ENSAMXG00000041861	-	98	58.451
ENSAMXG00000033124	-	56	48.571	ENSAMXG00000041864	prdm5	90	48.571
ENSAMXG00000033124	-	55	70.476	ENSAMXG00000041865	-	97	70.476
ENSAMXG00000033124	-	60	42.017	ENSAMXG00000024907	znf319b	85	42.017
ENSAMXG00000033124	-	78	42.857	ENSAMXG00000039622	zbtb41	64	43.200
ENSAMXG00000033124	-	69	60.000	ENSAMXG00000034847	-	90	60.000
ENSAMXG00000033124	-	70	55.000	ENSAMXG00000042174	-	89	54.286
ENSAMXG00000033124	-	57	44.776	ENSAMXG00000035246	-	72	44.776
ENSAMXG00000033124	-	69	68.571	ENSAMXG00000010930	-	77	68.571
ENSAMXG00000033124	-	73	61.111	ENSAMXG00000017609	-	85	61.111
ENSAMXG00000033124	-	62	65.574	ENSAMXG00000044107	-	88	65.574
ENSAMXG00000033124	-	59	69.524	ENSAMXG00000036633	-	69	61.607
ENSAMXG00000033124	-	55	55.556	ENSAMXG00000038325	-	93	58.559
ENSAMXG00000033124	-	56	60.748	ENSAMXG00000032237	-	92	60.748
ENSAMXG00000033124	-	69	56.338	ENSAMXG00000026144	-	97	56.338
ENSAMXG00000033124	-	55	71.845	ENSAMXG00000018161	-	95	74.286
ENSAMXG00000033124	-	56	62.857	ENSAMXG00000043978	-	87	62.857
ENSAMXG00000033124	-	66	56.944	ENSAMXG00000035437	-	99	56.944
ENSAMXG00000033124	-	55	61.832	ENSAMXG00000019489	-	85	61.832
ENSAMXG00000033124	-	82	54.945	ENSAMXG00000035286	si:ch1073-224n8.1	91	54.945
ENSAMXG00000033124	-	65	57.600	ENSAMXG00000032841	-	85	57.600
ENSAMXG00000033124	-	59	64.151	ENSAMXG00000012873	-	91	64.151
ENSAMXG00000033124	-	59	66.292	ENSAMXG00000029161	-	79	66.292
ENSAMXG00000033124	-	52	56.881	ENSAMXG00000042784	-	96	56.881
ENSAMXG00000033124	-	61	63.380	ENSAMXG00000036567	-	78	63.380
ENSAMXG00000033124	-	69	65.263	ENSAMXG00000035875	-	99	65.263
ENSAMXG00000033124	-	69	52.841	ENSAMXG00000031307	-	70	58.621
ENSAMXG00000033124	-	68	70.103	ENSAMXG00000038453	-	89	70.103
ENSAMXG00000033124	-	66	39.286	ENSAMXG00000042191	zbtb47a	71	39.286
ENSAMXG00000033124	-	56	69.608	ENSAMXG00000031009	-	83	69.608

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033124	-	66	58.095	ENSAPLG00000012660	-	80	58.095	Anas_platyrhynchos
ENSAMXG00000033124	-	59	52.027	ENSEASG00005020341	-	90	52.027	Equus_asinus_asinus
ENSAMXG00000033124	-	66	51.145	ENSECAG00000039445	-	77	51.145	Equus_caballus
ENSAMXG00000033124	-	59	52.027	ENSECAG00000017293	-	91	52.027	Equus_caballus
ENSAMXG00000033124	-	67	53.521	ENSGAGG00000015451	-	82	59.048	Gopherus_agassizii
ENSAMXG00000033124	-	55	59.434	ENSGAGG00000011574	-	70	59.434	Gopherus_agassizii
ENSAMXG00000033124	-	55	62.222	ENSGAGG00000008773	-	80	62.222	Gopherus_agassizii
ENSAMXG00000033124	-	63	60.952	ENSGAGG00000004740	-	86	61.364	Gopherus_agassizii
ENSAMXG00000033124	-	70	54.074	ENSGAGG00000017986	-	90	63.810	Gopherus_agassizii
ENSAMXG00000033124	-	66	55.224	ENSGAGG00000006683	-	87	59.000	Gopherus_agassizii
ENSAMXG00000033124	-	57	58.716	ENSGAGG00000019349	-	73	58.716	Gopherus_agassizii
ENSAMXG00000033124	-	55	60.396	ENSGAGG00000009739	-	99	60.396	Gopherus_agassizii
ENSAMXG00000033124	-	64	55.224	ENSGAGG00000006960	-	77	55.224	Gopherus_agassizii
ENSAMXG00000033124	-	58	61.321	ENSGAGG00000000971	-	92	61.321	Gopherus_agassizii
ENSAMXG00000033124	-	79	68.367	ENSIPUG00000015400	-	93	62.329	Ictalurus_punctatus
ENSAMXG00000033124	-	58	58.333	ENSIPUG00000015177	-	53	58.333	Ictalurus_punctatus
ENSAMXG00000033124	-	82	51.493	ENSMPUG00000008437	-	69	51.493	Mustela_putorius_furo
ENSAMXG00000033124	-	59	54.074	ENSPTIG00000009259	-	86	54.074	Panthera_tigris_altaica
ENSAMXG00000033124	-	78	48.951	ENSPSIG00000016247	-	61	48.951	Pelodiscus_sinensis
ENSAMXG00000033124	-	58	61.905	ENSPNAG00000012366	-	87	61.905	Pygocentrus_nattereri
ENSAMXG00000033124	-	56	66.055	ENSPNAG00000012138	-	92	66.055	Pygocentrus_nattereri
ENSAMXG00000033124	-	66	61.111	ENSPNAG00000005914	-	79	61.111	Pygocentrus_nattereri
ENSAMXG00000033124	-	65	64.179	ENSPNAG00000016025	-	89	70.370	Pygocentrus_nattereri
ENSAMXG00000033124	-	73	62.500	ENSPNAG00000002287	-	95	62.500	Pygocentrus_nattereri
ENSAMXG00000033124	-	80	60.769	ENSPNAG00000018437	-	85	60.769	Pygocentrus_nattereri
ENSAMXG00000033124	-	56	66.667	ENSPNAG00000021942	-	92	66.667	Pygocentrus_nattereri
ENSAMXG00000033124	-	58	58.209	ENSPNAG00000017479	-	86	58.209	Pygocentrus_nattereri
ENSAMXG00000033124	-	66	60.000	ENSPNAG00000007072	-	99	60.000	Pygocentrus_nattereri
ENSAMXG00000033124	-	62	73.034	ENSPNAG00000008653	-	100	73.034	Pygocentrus_nattereri
ENSAMXG00000033124	-	55	74.286	ENSPNAG00000003919	-	83	74.286	Pygocentrus_nattereri
ENSAMXG00000033124	-	69	61.268	ENSPNAG00000016045	-	76	61.268	Pygocentrus_nattereri
ENSAMXG00000033124	-	55	67.961	ENSPNAG00000028765	-	83	67.961	Pygocentrus_nattereri
ENSAMXG00000033124	-	61	56.000	ENSPNAG00000029386	-	91	56.000	Pygocentrus_nattereri
ENSAMXG00000033124	-	55	69.149	ENSPNAG00000003526	-	82	69.149	Pygocentrus_nattereri
ENSAMXG00000033124	-	62	63.551	ENSPNAG00000024704	-	90	63.551	Pygocentrus_nattereri
ENSAMXG00000033124	-	55	65.493	ENSPNAG00000018471	-	72	65.493	Pygocentrus_nattereri
ENSAMXG00000033124	-	63	56.944	ENSPNAG00000017455	-	76	61.062	Pygocentrus_nattereri
ENSAMXG00000033124	-	77	55.147	ENSPNAG00000000783	-	84	63.551	Pygocentrus_nattereri
ENSAMXG00000033124	-	55	53.704	ENSUAMG00000027415	-	68	53.704	Ursus_americanus
ENSAMXG00000033124	-	77	52.000	ENSUAMG00000027384	-	94	52.000	Ursus_americanus
ENSAMXG00000033124	-	57	65.347	ENSVPAG00000002698	-	99	65.347	Vicugna_pacos