EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000033125 (Gene tree)
Gene ID
103041973
Gene Symbol
pcbp4
Alias
wu:fc68f03|zgc:65870|zgc:77347
Full Name
poly(rC)-binding protein 4-like
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
128661 bases
Position
chr22:1410792-1539452
Accession
103041973
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000054280KH_1PF00013.296.2e-5113
ENSAMXP00000054280KH_1PF00013.296.2e-5123
ENSAMXP00000054280KH_1PF00013.296.2e-5133
ENSAMXP00000054280KH_2PF07650.171.1e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000049182-3199XM_022682212ENSAMXP00000054280465 (aa)XP_022537933UPI000BBD8913
Gene Model
Click here to download ENSAMXG00000033125's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033125's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000033125pcbp47163.636ENSAMXG00000037819pcbp29663.636
ENSAMXG00000033125pcbp45049.206ENSAMXG00000006660hnrpkl5849.206
ENSAMXG00000033125pcbp45049.206ENSAMXG00000011326hnrnpk5449.206
ENSAMXG00000033125pcbp47063.914ENSAMXG00000013588-9763.914
ENSAMXG00000033125pcbp47231.818ENSAMXG00000007453igf2bp36531.818
ENSAMXG00000033125pcbp47161.585ENSAMXG00000016858-9661.212
ENSAMXG00000033125pcbp46634.351ENSAMXG00000032347igf2bp2b5934.351
ENSAMXG00000033125pcbp47464.857ENSAMXG00000003440pcbp39764.857
ENSAMXG00000033125pcbp49754.123ENSAMXG00000001760zgc:1100459954.123
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000033125pcbp49657.582ENSG00000090097PCBP49776.074Homo_sapiens
ENSAMXG00000033125pcbp410082.189ENSAPOG00000009897-10081.974Acanthochromis_polyacanthus
ENSAMXG00000033125pcbp49558.072ENSAMEG00000009211PCBP49758.744Ailuropoda_melanoleuca
ENSAMXG00000033125pcbp49182.938ENSACIG00000020434-10082.701Amphilophus_citrinellus
ENSAMXG00000033125pcbp48883.886ENSACIG00000015264pcbp48984.360Amphilophus_citrinellus
ENSAMXG00000033125pcbp49879.560ENSAOCG00000021366-10079.341Amphiprion_ocellaris
ENSAMXG00000033125pcbp49470.960ENSAOCG00000006924-10070.960Amphiprion_ocellaris
ENSAMXG00000033125pcbp48985.545ENSAPEG00000023157pcbp410084.360Amphiprion_percula
ENSAMXG00000033125pcbp48858.654ENSAPEG00000009555-7480.612Amphiprion_percula
ENSAMXG00000033125pcbp49878.431ENSATEG00000006511-10077.996Anabas_testudineus
ENSAMXG00000033125pcbp48978.333ENSATEG00000008529pcbp49974.610Anabas_testudineus
ENSAMXG00000033125pcbp49560.811ENSACAG00000011701PCBP49760.225Anolis_carolinensis
ENSAMXG00000033125pcbp49657.582ENSANAG00000023072PCBP49958.242Aotus_nancymaae
ENSAMXG00000033125pcbp410082.833ENSACLG00000025246-10082.833Astatotilapia_calliptera
ENSAMXG00000033125pcbp49882.573ENSACLG00000013348pcbp49782.305Astatotilapia_calliptera
ENSAMXG00000033125pcbp49558.296ENSBTAG00000018622PCBP49758.969Bos_taurus
ENSAMXG00000033125pcbp49657.802ENSCJAG00000005783PCBP49958.462Callithrix_jacchus
ENSAMXG00000033125pcbp49558.072ENSCAFG00000010019PCBP49758.744Canis_familiaris
ENSAMXG00000033125pcbp49558.072ENSCAFG00020022361PCBP49758.744Canis_lupus_dingo
ENSAMXG00000033125pcbp49558.296ENSCHIG00000012918PCBP49758.969Capra_hircus
ENSAMXG00000033125pcbp49558.072ENSTSYG00000008765PCBP49758.744Carlito_syrichta
ENSAMXG00000033125pcbp49557.848ENSCAPG00000005895PCBP49758.296Cavia_aperea
ENSAMXG00000033125pcbp49557.848ENSCPOG00000014617PCBP49758.520Cavia_porcellus
ENSAMXG00000033125pcbp49657.802ENSCCAG00000033268PCBP49958.462Cebus_capucinus
ENSAMXG00000033125pcbp49956.688ENSCATG00000032034PCBP49958.462Cercocebus_atys
ENSAMXG00000033125pcbp49557.848ENSCLAG00000008356PCBP49758.520Chinchilla_lanigera
ENSAMXG00000033125pcbp49657.802ENSCSAG00000013913PCBP49958.462Chlorocebus_sabaeus
ENSAMXG00000033125pcbp49560.987ENSCPBG00000016554PCBP49560.314Chrysemys_picta_bellii
ENSAMXG00000033125pcbp49657.802ENSCANG00000038865PCBP49958.462Colobus_angolensis_palliatus
ENSAMXG00000033125pcbp49558.296ENSCGRG00001014953Pcbp49758.969Cricetulus_griseus_chok1gshd
ENSAMXG00000033125pcbp49558.296ENSCGRG00000008617Pcbp49758.969Cricetulus_griseus_crigri
ENSAMXG00000033125pcbp49872.149ENSCSEG00000021041PCBP410072.149Cynoglossus_semilaevis
ENSAMXG00000033125pcbp49973.706ENSCSEG00000014487pcbp49674.481Cynoglossus_semilaevis
ENSAMXG00000033125pcbp49176.457ENSCVAG00000003674pcbp49874.023Cyprinodon_variegatus
ENSAMXG00000033125pcbp410081.545ENSCVAG00000013090-10080.901Cyprinodon_variegatus
ENSAMXG00000033125pcbp410093.978ENSDARG00000024276pcbp410094.357Danio_rerio
ENSAMXG00000033125pcbp49277.778ENSDNOG00000033951PCBP48771.084Dasypus_novemcinctus
ENSAMXG00000033125pcbp49556.502ENSDORG00000000573Pcbp49758.296Dipodomys_ordii
ENSAMXG00000033125pcbp46358.280ENSETEG00000001778PCBP49658.280Echinops_telfairi
ENSAMXG00000033125pcbp49558.072ENSEASG00005012889PCBP49758.744Equus_asinus_asinus
ENSAMXG00000033125pcbp49558.072ENSECAG00000024218PCBP49758.744Equus_caballus
ENSAMXG00000033125pcbp410080.290ENSELUG00000018204pcbp410080.083Esox_lucius
ENSAMXG00000033125pcbp410079.661ENSELUG00000001870-10078.602Esox_lucius
ENSAMXG00000033125pcbp49558.072ENSFCAG00000009148PCBP49758.744Felis_catus
ENSAMXG00000033125pcbp49458.124ENSFALG00000008831PCBP49558.219Ficedula_albicollis
ENSAMXG00000033125pcbp49557.848ENSFDAG00000012692PCBP49956.853Fukomys_damarensis
ENSAMXG00000033125pcbp49459.569ENSFHEG00000002769-9759.569Fundulus_heteroclitus
ENSAMXG00000033125pcbp49878.289ENSGMOG00000017799-10078.070Gadus_morhua
ENSAMXG00000033125pcbp49857.753ENSGALG00000027695PCBP49757.942Gallus_gallus
ENSAMXG00000033125pcbp48085.676ENSGAFG00000021090-7885.676Gambusia_affinis
ENSAMXG00000033125pcbp49879.386ENSGACG00000002664-10080.044Gasterosteus_aculeatus
ENSAMXG00000033125pcbp49560.403ENSGAGG00000022116PCBP49559.865Gopherus_agassizii
ENSAMXG00000033125pcbp49657.582ENSGGOG00000012474PCBP49958.242Gorilla_gorilla
ENSAMXG00000033125pcbp410082.833ENSHBUG00000005329-10082.618Haplochromis_burtoni
ENSAMXG00000033125pcbp49882.158ENSHBUG00000009472pcbp49782.099Haplochromis_burtoni
ENSAMXG00000033125pcbp49558.296ENSHGLG00000012018PCBP49758.969Heterocephalus_glaber_female
ENSAMXG00000033125pcbp49556.570ENSHGLG00100008748PCBP49757.238Heterocephalus_glaber_male
ENSAMXG00000033125pcbp410076.874ENSHCOG00000010838-9789.474Hippocampus_comes
ENSAMXG00000033125pcbp410093.978ENSIPUG00000008212pcbp410094.624Ictalurus_punctatus
ENSAMXG00000033125pcbp49556.278ENSSTOG00000002573PCBP48965.432Ictidomys_tridecemlineatus
ENSAMXG00000033125pcbp49558.072ENSJJAG00000016235Pcbp49758.744Jaculus_jaculus
ENSAMXG00000033125pcbp410081.116ENSKMAG00000017554-10081.116Kryptolebias_marmoratus
ENSAMXG00000033125pcbp49882.729ENSKMAG00000014252pcbp410082.004Kryptolebias_marmoratus
ENSAMXG00000033125pcbp410081.760ENSLBEG00000011345-10081.760Labrus_bergylta
ENSAMXG00000033125pcbp410067.880ENSLACG00000015899PCBP49875.862Latimeria_chalumnae
ENSAMXG00000033125pcbp410087.983ENSLOCG00000013402pcbp410088.627Lepisosteus_oculatus
ENSAMXG00000033125pcbp49456.039ENSLAFG00000010732PCBP410056.763Loxodonta_africana
ENSAMXG00000033125pcbp49657.802ENSMFAG00000001431PCBP49958.462Macaca_fascicularis
ENSAMXG00000033125pcbp49657.802ENSMMUG00000022205PCBP49464.759Macaca_mulatta
ENSAMXG00000033125pcbp49657.802ENSMNEG00000028553PCBP49958.462Macaca_nemestrina
ENSAMXG00000033125pcbp49657.802ENSMLEG00000027083PCBP49958.462Mandrillus_leucophaeus
ENSAMXG00000033125pcbp49883.297ENSMAMG00000011364-9883.077Mastacembelus_armatus
ENSAMXG00000033125pcbp49880.713ENSMAMG00000010163pcbp49681.913Mastacembelus_armatus
ENSAMXG00000033125pcbp410082.833ENSMZEG00005023631-10082.833Maylandia_zebra
ENSAMXG00000033125pcbp49882.573ENSMZEG00005008852pcbp49980.353Maylandia_zebra
ENSAMXG00000033125pcbp46552.703ENSMGAG00000003895-9949.554Meleagris_gallopavo
ENSAMXG00000033125pcbp45375.269ENSMGAG00000005091-8575.269Meleagris_gallopavo
ENSAMXG00000033125pcbp49558.296ENSMAUG00000021064Pcbp49758.969Mesocricetus_auratus
ENSAMXG00000033125pcbp49558.072ENSMICG00000002686PCBP49758.744Microcebus_murinus
ENSAMXG00000033125pcbp49558.072ENSMOCG00000013557Pcbp49758.744Microtus_ochrogaster
ENSAMXG00000033125pcbp49878.022ENSMMOG00000020533-10078.022Mola_mola
ENSAMXG00000033125pcbp46965.109ENSMMOG00000017756pcbp49765.109Mola_mola
ENSAMXG00000033125pcbp49558.520ENSMODG00000011790PCBP48258.520Monodelphis_domestica
ENSAMXG00000033125pcbp49482.382ENSMALG00000022117-10081.842Monopterus_albus
ENSAMXG00000033125pcbp48886.538ENSMALG00000020318pcbp48884.856Monopterus_albus
ENSAMXG00000033125pcbp49558.296MGP_CAROLIEiJ_G0032623Pcbp49378.804Mus_caroli
ENSAMXG00000033125pcbp49558.296ENSMUSG00000023495Pcbp49378.804Mus_musculus
ENSAMXG00000033125pcbp49558.296MGP_PahariEiJ_G0015491Pcbp49378.804Mus_pahari
ENSAMXG00000033125pcbp49558.296MGP_SPRETEiJ_G0033768-9378.804Mus_spretus
ENSAMXG00000033125pcbp49558.072ENSMPUG00000011766PCBP49758.744Mustela_putorius_furo
ENSAMXG00000033125pcbp49558.296ENSNGAG00000013148Pcbp49758.969Nannospalax_galili
ENSAMXG00000033125pcbp49879.560ENSNBRG00000015885-10079.560Neolamprologus_brichardi
ENSAMXG00000033125pcbp49470.312ENSNBRG00000007475pcbp49871.205Neolamprologus_brichardi
ENSAMXG00000033125pcbp49657.802ENSNLEG00000007064PCBP49958.462Nomascus_leucogenys
ENSAMXG00000033125pcbp48849.672ENSMEUG00000006917PCBP49549.453Notamacropus_eugenii
ENSAMXG00000033125pcbp48951.209ENSOPRG00000008763PCBP49851.648Ochotona_princeps
ENSAMXG00000033125pcbp49558.072ENSODEG00000018230PCBP49758.744Octodon_degus
ENSAMXG00000033125pcbp49557.528ENSOANG00000014110PCBP49457.303Ornithorhynchus_anatinus
ENSAMXG00000033125pcbp49558.520ENSOCUG00000025336PCBP49758.969Oryctolagus_cuniculus
ENSAMXG00000033125pcbp49876.875ENSORLG00000003061pcbp410077.016Oryzias_latipes
ENSAMXG00000033125pcbp49878.901ENSORLG00000009899-10078.681Oryzias_latipes
ENSAMXG00000033125pcbp410081.116ENSORLG00020001183-10080.901Oryzias_latipes_hni
ENSAMXG00000033125pcbp410081.545ENSORLG00015017819-10081.330Oryzias_latipes_hsok
ENSAMXG00000033125pcbp410074.802ENSORLG00015019262pcbp410077.000Oryzias_latipes_hsok
ENSAMXG00000033125pcbp410073.673ENSOMEG00000003516-10075.306Oryzias_melastigma
ENSAMXG00000033125pcbp410081.760ENSOMEG00000011545-10081.545Oryzias_melastigma
ENSAMXG00000033125pcbp49557.848ENSOGAG00000032384PCBP49758.520Otolemur_garnettii
ENSAMXG00000033125pcbp49056.872ENSOARG00000006603PCBP410057.583Ovis_aries
ENSAMXG00000033125pcbp49657.582ENSPPAG00000038764PCBP49958.242Pan_paniscus
ENSAMXG00000033125pcbp49558.072ENSPPRG00000006165PCBP49758.744Panthera_pardus
ENSAMXG00000033125pcbp49558.072ENSPTIG00000005401PCBP49358.744Panthera_tigris_altaica
ENSAMXG00000033125pcbp49657.582ENSPTRG00000014983PCBP49958.242Pan_troglodytes
ENSAMXG00000033125pcbp49657.802ENSPANG00000026222PCBP49958.462Papio_anubis
ENSAMXG00000033125pcbp410078.925ENSPKIG00000005487-10078.925Paramormyrops_kingsleyae
ENSAMXG00000033125pcbp410090.538ENSPKIG00000010244pcbp410091.183Paramormyrops_kingsleyae
ENSAMXG00000033125pcbp47658.380ENSPSIG00000011286PCBP49659.146Pelodiscus_sinensis
ENSAMXG00000033125pcbp49181.368ENSPMGG00000000063pcbp49981.368Periophthalmus_magnuspinnatus
ENSAMXG00000033125pcbp49875.000ENSPMGG00000022732-10074.781Periophthalmus_magnuspinnatus
ENSAMXG00000033125pcbp49558.296ENSPEMG00000009276Pcbp49758.969Peromyscus_maniculatus_bairdii
ENSAMXG00000033125pcbp49559.193ENSPCIG00000018151PCBP49358.969Phascolarctos_cinereus
ENSAMXG00000033125pcbp410081.974ENSPFOG00000002989-10081.974Poecilia_formosa
ENSAMXG00000033125pcbp49578.174ENSPFOG00000014474pcbp49686.614Poecilia_formosa
ENSAMXG00000033125pcbp48078.701ENSPLAG00000023316pcbp48981.039Poecilia_latipinna
ENSAMXG00000033125pcbp47874.595ENSPLAG00000011438-9874.595Poecilia_latipinna
ENSAMXG00000033125pcbp46172.542ENSPMEG00000012990pcbp410074.915Poecilia_mexicana
ENSAMXG00000033125pcbp49874.066ENSPREG00000017370-10074.066Poecilia_reticulata
ENSAMXG00000033125pcbp45292.857ENSPREG00000021498-8192.857Poecilia_reticulata
ENSAMXG00000033125pcbp49657.802ENSPPYG00000013822PCBP49958.462Pongo_abelii
ENSAMXG00000033125pcbp48852.135ENSPCAG00000009515PCBP49752.809Procavia_capensis
ENSAMXG00000033125pcbp49558.072ENSPCOG00000027535PCBP49758.744Propithecus_coquereli
ENSAMXG00000033125pcbp48849.677ENSPVAG00000012474PCBP49849.573Pteropus_vampyrus
ENSAMXG00000033125pcbp49280.856ENSPNYG00000019234pcbp410081.757Pundamilia_nyererei
ENSAMXG00000033125pcbp49879.780ENSPNYG00000003098-10079.560Pundamilia_nyererei
ENSAMXG00000033125pcbp410098.065ENSPNAG00000025434pcbp410098.065Pygocentrus_nattereri
ENSAMXG00000033125pcbp49558.296ENSRNOG00000012406Pcbp49758.969Rattus_norvegicus
ENSAMXG00000033125pcbp49657.802ENSRBIG00000043793PCBP49958.462Rhinopithecus_bieti
ENSAMXG00000033125pcbp49657.802ENSRROG00000034589PCBP49958.462Rhinopithecus_roxellana
ENSAMXG00000033125pcbp49657.802ENSSBOG00000027029PCBP49958.462Saimiri_boliviensis_boliviensis
ENSAMXG00000033125pcbp47262.357ENSSHAG00000007362PCBP410062.357Sarcophilus_harrisii
ENSAMXG00000033125pcbp47093.528ENSSFOG00015008221pcbp46093.506Scleropages_formosus
ENSAMXG00000033125pcbp410080.043ENSSFOG00015012075PCBP410080.043Scleropages_formosus
ENSAMXG00000033125pcbp49881.013ENSSMAG00000005827pcbp49579.916Scophthalmus_maximus
ENSAMXG00000033125pcbp410080.728ENSSMAG00000009392-9980.728Scophthalmus_maximus
ENSAMXG00000033125pcbp48985.476ENSSDUG00000017719pcbp49785.000Seriola_dumerili
ENSAMXG00000033125pcbp49879.560ENSSDUG00000015540-10079.341Seriola_dumerili
ENSAMXG00000033125pcbp49879.560ENSSLDG00000007851-10079.341Seriola_lalandi_dorsalis
ENSAMXG00000033125pcbp49555.305ENSSPUG00000000194PCBP49754.176Sphenodon_punctatus
ENSAMXG00000033125pcbp410081.974ENSSPAG00000003033-10081.974Stegastes_partitus
ENSAMXG00000033125pcbp48074.093ENSSPAG00000019058-9273.316Stegastes_partitus
ENSAMXG00000033125pcbp49558.072ENSSSCG00000028446PCBP49758.744Sus_scrofa
ENSAMXG00000033125pcbp46957.143ENSTGUG00000006393PCBP49658.055Taeniopygia_guttata
ENSAMXG00000033125pcbp49879.121ENSTRUG00000007426-10078.901Takifugu_rubripes
ENSAMXG00000033125pcbp49876.484ENSTNIG00000017887-9976.484Tetraodon_nigroviridis
ENSAMXG00000033125pcbp48040.000ENSTBEG00000015770PCBP410040.482Tupaia_belangeri
ENSAMXG00000033125pcbp46954.237ENSTTRG00000001443PCBP48354.237Tursiops_truncatus
ENSAMXG00000033125pcbp49554.450ENSUAMG00000020871PCBP410055.236Ursus_americanus
ENSAMXG00000033125pcbp48561.364ENSUMAG00000021609PCBP48861.558Ursus_maritimus
ENSAMXG00000033125pcbp49558.072ENSVVUG00000026857PCBP49758.744Vulpes_vulpes
ENSAMXG00000033125pcbp49470.526ENSXCOG00000000111-10072.881Xiphophorus_couchianus
ENSAMXG00000033125pcbp410080.687ENSXMAG00000024530-10081.330Xiphophorus_maculatus
ENSAMXG00000033125pcbp48577.396ENSXMAG00000022188-9078.870Xiphophorus_maculatus
ENSAMXG00000033125pcbp47788.089ENSXMAG00000015709pcbp47986.016Xiphophorus_maculatus

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