EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSAMXG00000033347 (Gene tree)
Gene ID
103024792
Gene Symbol
u2af2a
Alias
zgc:110115
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Plus strand
Length
19669 bases
Position
chr10:34206142-34225810
Accession
103024792
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000052965TransformerPF06495.112.7e-0611
ENSAMXP00000052965RRM_1PF00076.223.5e-3513
ENSAMXP00000052965RRM_1PF00076.223.5e-3523
ENSAMXP00000052965RRM_1PF00076.223.5e-3533
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000057022-5437XM_007256451ENSAMXP00000052965470 (aa)XP_007256513UPI000440C066
Gene Model
Click here to download ENSAMXG00000033347's gene model file
Pathways
Pathway IDPathway NameSource
amex03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033347's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSAMXG00000033347u2af2a6538.235ENSAMXG00000041030puf60b6134.375
ENSAMXG00000033347u2af2a9989.765ENSAMXG00000039454u2af2b9988.913
ENSAMXG00000033347u2af2a7336.275ENSAMXG00000036570puf60a6036.275
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000033347u2af2a10084.647ENSG00000063244U2AF210090.190Homo_sapiens
ENSAMXG00000033347u2af2a6790.520ENSAPOG00000023155u2af2a10090.520Acanthochromis_polyacanthus
ENSAMXG00000033347u2af2a9971.130ENSAPOG00000002208-10070.231Acanthochromis_polyacanthus
ENSAMXG00000033347u2af2a7987.027ENSAMEG00000003864U2AF210081.043Ailuropoda_melanoleuca
ENSAMXG00000033347u2af2a8393.846ENSACIG00000005749u2af2a8993.846Amphilophus_citrinellus
ENSAMXG00000033347u2af2a9670.613ENSACIG00000014173-8377.889Amphilophus_citrinellus
ENSAMXG00000033347u2af2a9971.130ENSAOCG00000003595-10070.231Amphiprion_ocellaris
ENSAMXG00000033347u2af2a9992.111ENSAOCG00000015571u2af2a10091.258Amphiprion_ocellaris
ENSAMXG00000033347u2af2a8394.103ENSAPEG00000009376u2af2a9094.103Amphiprion_percula
ENSAMXG00000033347u2af2a9871.581ENSAPEG00000020062-8180.206Amphiprion_percula
ENSAMXG00000033347u2af2a9671.706ENSATEG00000020577-8379.692Anabas_testudineus
ENSAMXG00000033347u2af2a10089.627ENSATEG00000022332u2af2a10088.150Anabas_testudineus
ENSAMXG00000033347u2af2a10085.983ENSACAG00000015489U2AF210085.595Anolis_carolinensis
ENSAMXG00000033347u2af2a10082.656ENSANAG00000028042U2AF210082.065Aotus_nancymaae
ENSAMXG00000033347u2af2a9971.130ENSACLG00000020793-10070.231Astatotilapia_calliptera
ENSAMXG00000033347u2af2a10088.125ENSACLG00000022181u2af2a10088.150Astatotilapia_calliptera
ENSAMXG00000033347u2af2a10086.596ENSBTAG00000002830U2AF210085.957Bos_taurus
ENSAMXG00000033347u2af2a8757.561WBGene00006697uaf-110053.595Caenorhabditis_elegans
ENSAMXG00000033347u2af2a10084.504ENSCJAG00000017128U2AF210084.058Callithrix_jacchus
ENSAMXG00000033347u2af2a10084.647ENSCAFG00000002551U2AF210084.200Canis_familiaris
ENSAMXG00000033347u2af2a8690.663ENSCAFG00020015445U2AF28191.327Canis_lupus_dingo
ENSAMXG00000033347u2af2a8676.658ENSCHIG00000023595U2AF28477.041Capra_hircus
ENSAMXG00000033347u2af2a10084.504ENSTSYG00000007432U2AF210084.058Carlito_syrichta
ENSAMXG00000033347u2af2a8888.916ENSCAPG00000008466U2AF210083.476Cavia_aperea
ENSAMXG00000033347u2af2a10084.504ENSCPOG00000001582U2AF210084.058Cavia_porcellus
ENSAMXG00000033347u2af2a10084.504ENSCCAG00000023336U2AF210084.058Cebus_capucinus
ENSAMXG00000033347u2af2a10084.647ENSCATG00000004637U2AF210084.200Cercocebus_atys
ENSAMXG00000033347u2af2a10084.647ENSCLAG00000000596U2AF210084.200Chinchilla_lanigera
ENSAMXG00000033347u2af2a10084.647ENSCSAG00000001722U2AF210084.200Chlorocebus_sabaeus
ENSAMXG00000033347u2af2a8589.163ENSCPBG00000004485U2AF210090.190Chrysemys_picta_bellii
ENSAMXG00000033347u2af2a8567.920ENSCING00000003455-7868.205Ciona_intestinalis
ENSAMXG00000033347u2af2a8566.667ENSCSAVG00000006813-9062.791Ciona_savignyi
ENSAMXG00000033347u2af2a9183.599ENSCANG00000031002-9683.105Colobus_angolensis_palliatus
ENSAMXG00000033347u2af2a10077.963ENSCANG00000043845-10079.253Colobus_angolensis_palliatus
ENSAMXG00000033347u2af2a10086.809ENSCGRG00001003185-10086.170Cricetulus_griseus_chok1gshd
ENSAMXG00000033347u2af2a9976.875ENSCGRG00001007486-9976.778Cricetulus_griseus_chok1gshd
ENSAMXG00000033347u2af2a5187.448ENSCGRG00000004524-7983.794Cricetulus_griseus_crigri
ENSAMXG00000033347u2af2a9976.875ENSCGRG00000018587-9976.778Cricetulus_griseus_crigri
ENSAMXG00000033347u2af2a9087.500ENSCSEG00000018709u2af2a7859.717Cynoglossus_semilaevis
ENSAMXG00000033347u2af2a9969.811ENSCSEG00000020504-9468.487Cynoglossus_semilaevis
ENSAMXG00000033347u2af2a10092.128ENSCVAG00000001259u2af2a10091.277Cyprinodon_variegatus
ENSAMXG00000033347u2af2a9970.650ENSCVAG00000023307-10070.231Cyprinodon_variegatus
ENSAMXG00000033347u2af2a10093.869ENSDARG00000012505u2af2a10093.658Danio_rerio
ENSAMXG00000033347u2af2a10085.451ENSDARG00000011740u2af2b10083.984Danio_rerio
ENSAMXG00000033347u2af2a9183.599ENSDNOG00000047039U2AF29683.105Dasypus_novemcinctus
ENSAMXG00000033347u2af2a10084.504ENSDORG00000003250U2af210084.058Dipodomys_ordii
ENSAMXG00000033347u2af2a8371.795FBgn0005411U2af5010070.745Drosophila_melanogaster
ENSAMXG00000033347u2af2a8751.168FBgn0034834LS28553.769Drosophila_melanogaster
ENSAMXG00000033347u2af2a9170.862ENSEBUG00000010917U2AF28474.550Eptatretus_burgeri
ENSAMXG00000033347u2af2a8860.526ENSEBUG00000001732U2AF28461.954Eptatretus_burgeri
ENSAMXG00000033347u2af2a8790.000ENSEASG00005020708U2AF27691.327Equus_asinus_asinus
ENSAMXG00000033347u2af2a10086.809ENSECAG00000010110U2AF210086.170Equus_caballus
ENSAMXG00000033347u2af2a10085.835ENSELUG00000022291u2af2b10084.958Esox_lucius
ENSAMXG00000033347u2af2a9970.355ENSELUG00000018459-10068.973Esox_lucius
ENSAMXG00000033347u2af2a10088.344ENSELUG00000015850u2af2a10087.730Esox_lucius
ENSAMXG00000033347u2af2a10084.504ENSFCAG00000011504U2AF210084.058Felis_catus
ENSAMXG00000033347u2af2a8888.916ENSFDAG00000011264U2AF29683.476Fukomys_damarensis
ENSAMXG00000033347u2af2a10092.128ENSFHEG00000016025u2af2a10091.277Fundulus_heteroclitus
ENSAMXG00000033347u2af2a10090.000ENSGMOG00000004535u2af2a10090.890Gadus_morhua
ENSAMXG00000033347u2af2a9884.829ENSGALG00000052748U2AF26583.940Gallus_gallus
ENSAMXG00000033347u2af2a9972.034ENSGAFG00000005628-10070.913Gambusia_affinis
ENSAMXG00000033347u2af2a10092.128ENSGAFG00000013626u2af2a8891.277Gambusia_affinis
ENSAMXG00000033347u2af2a10092.340ENSGACG00000010632U2AF210091.915Gasterosteus_aculeatus
ENSAMXG00000033347u2af2a9970.807ENSGACG00000014500-10069.375Gasterosteus_aculeatus
ENSAMXG00000033347u2af2a6790.190ENSGAGG00000011849U2AF210090.190Gopherus_agassizii
ENSAMXG00000033347u2af2a9971.130ENSHBUG00000017424-10070.231Haplochromis_burtoni
ENSAMXG00000033347u2af2a10088.125ENSHBUG00000013935u2af2a10088.150Haplochromis_burtoni
ENSAMXG00000033347u2af2a10084.504ENSHGLG00000005889U2AF210084.058Heterocephalus_glaber_female
ENSAMXG00000033347u2af2a8888.916ENSHGLG00100004757U2AF210083.476Heterocephalus_glaber_male
ENSAMXG00000033347u2af2a10091.702ENSHCOG00000019367u2af2a10091.702Hippocampus_comes
ENSAMXG00000033347u2af2a9989.263ENSIPUG00000009077u2af29988.632Ictalurus_punctatus
ENSAMXG00000033347u2af2a9971.915ENSIPUG00000009844-10068.443Ictalurus_punctatus
ENSAMXG00000033347u2af2a10091.507ENSIPUG00000007717u2af2a10091.295Ictalurus_punctatus
ENSAMXG00000033347u2af2a10084.504ENSSTOG00000019595U2AF210084.058Ictidomys_tridecemlineatus
ENSAMXG00000033347u2af2a10084.504ENSJJAG00000017705U2af210084.058Jaculus_jaculus
ENSAMXG00000033347u2af2a10089.419ENSKMAG00000005960u2af2a10087.942Kryptolebias_marmoratus
ENSAMXG00000033347u2af2a10092.553ENSLBEG00000016162u2af2a10091.702Labrus_bergylta
ENSAMXG00000033347u2af2a9770.253ENSLBEG00000005001-8377.638Labrus_bergylta
ENSAMXG00000033347u2af2a8090.957ENSLACG00000001648U2AF210090.957Latimeria_chalumnae
ENSAMXG00000033347u2af2a9972.594ENSLOCG00000010843-10070.860Lepisosteus_oculatus
ENSAMXG00000033347u2af2a6191.930ENSLOCG00000008050u2af2b8388.963Lepisosteus_oculatus
ENSAMXG00000033347u2af2a10084.855ENSLAFG00000018056-10085.031Loxodonta_africana
ENSAMXG00000033347u2af2a10075.776ENSLAFG00000028496-8183.590Loxodonta_africana
ENSAMXG00000033347u2af2a10084.504ENSMFAG00000038383U2AF210084.058Macaca_fascicularis
ENSAMXG00000033347u2af2a10084.298ENSMMUG00000004810U2AF210083.851Macaca_mulatta
ENSAMXG00000033347u2af2a10084.647ENSMNEG00000042096U2AF210084.200Macaca_nemestrina
ENSAMXG00000033347u2af2a8889.104ENSMLEG00000032219U2AF27491.538Mandrillus_leucophaeus
ENSAMXG00000033347u2af2a9969.874ENSMAMG00000020158-10068.763Mastacembelus_armatus
ENSAMXG00000033347u2af2a10092.128ENSMAMG00000019817u2af2a10091.277Mastacembelus_armatus
ENSAMXG00000033347u2af2a10091.915ENSMZEG00005016563u2af2a10091.064Maylandia_zebra
ENSAMXG00000033347u2af2a9971.130ENSMZEG00005023318-10070.231Maylandia_zebra
ENSAMXG00000033347u2af2a8888.916ENSMAUG00000008180U2af29883.298Mesocricetus_auratus
ENSAMXG00000033347u2af2a10084.647ENSMICG00000027681U2AF210084.200Microcebus_murinus
ENSAMXG00000033347u2af2a6787.342ENSMOCG00000001018-10087.342Microtus_ochrogaster
ENSAMXG00000033347u2af2a10077.824ENSMOCG00000007227-10076.569Microtus_ochrogaster
ENSAMXG00000033347u2af2a10084.504ENSMOCG00000013214-10084.058Microtus_ochrogaster
ENSAMXG00000033347u2af2a9593.034ENSMMOG00000016600u2af2a10093.034Mola_mola
ENSAMXG00000033347u2af2a10091.915ENSMALG00000009985u2af2a10091.064Monopterus_albus
ENSAMXG00000033347u2af2a10084.647MGP_CAROLIEiJ_G0029150U2af210084.200Mus_caroli
ENSAMXG00000033347u2af2a10084.647ENSMUSG00000030435U2af210090.190Mus_musculus
ENSAMXG00000033347u2af2a10084.647MGP_PahariEiJ_G0021017U2af210084.200Mus_pahari
ENSAMXG00000033347u2af2a10084.647MGP_SPRETEiJ_G0030203U2af210084.200Mus_spretus
ENSAMXG00000033347u2af2a10084.647ENSMPUG00000007135U2AF210084.200Mustela_putorius_furo
ENSAMXG00000033347u2af2a10084.504ENSNGAG00000020369U2af210084.058Nannospalax_galili
ENSAMXG00000033347u2af2a10088.125ENSNBRG00000002568u2af2a10088.150Neolamprologus_brichardi
ENSAMXG00000033347u2af2a9670.551ENSNBRG00000011100-8378.141Neolamprologus_brichardi
ENSAMXG00000033347u2af2a10073.629ENSNLEG00000010562U2AF210090.190Nomascus_leucogenys
ENSAMXG00000033347u2af2a8676.368ENSMEUG00000002346U2AF28476.923Notamacropus_eugenii
ENSAMXG00000033347u2af2a10079.545ENSODEG00000012729-10079.089Octodon_degus
ENSAMXG00000033347u2af2a9962.313ENSODEG00000009254-10058.996Octodon_degus
ENSAMXG00000033347u2af2a9971.130ENSONIG00000009682-10070.231Oreochromis_niloticus
ENSAMXG00000033347u2af2a10089.072ENSONIG00000012793u2af2a10087.603Oreochromis_niloticus
ENSAMXG00000033347u2af2a10088.797ENSORLG00000011545u2af2a10087.110Oryzias_latipes
ENSAMXG00000033347u2af2a10088.797ENSORLG00020006941u2af2a10087.110Oryzias_latipes_hni
ENSAMXG00000033347u2af2a10088.797ENSORLG00015012843u2af2a10087.110Oryzias_latipes_hsok
ENSAMXG00000033347u2af2a10089.004ENSOMEG00000011386u2af2a10087.110Oryzias_melastigma
ENSAMXG00000033347u2af2a10084.504ENSOGAG00000007206-10084.058Otolemur_garnettii
ENSAMXG00000033347u2af2a9654.605ENSOGAG00000034729-8061.155Otolemur_garnettii
ENSAMXG00000033347u2af2a10076.907ENSOARG00000001091U2AF210075.413Ovis_aries
ENSAMXG00000033347u2af2a10084.504ENSPPAG00000039782U2AF210084.058Pan_paniscus
ENSAMXG00000033347u2af2a10084.504ENSPPRG00000013843U2AF210084.058Panthera_pardus
ENSAMXG00000033347u2af2a9977.021ENSPTIG00000005489U2AF28486.260Panthera_tigris_altaica
ENSAMXG00000033347u2af2a10084.504ENSPTRG00000011523U2AF210090.190Pan_troglodytes
ENSAMXG00000033347u2af2a10084.647ENSPANG00000008459U2AF210084.200Papio_anubis
ENSAMXG00000033347u2af2a10087.164ENSPKIG00000024346u2af2b8893.590Paramormyrops_kingsleyae
ENSAMXG00000033347u2af2a9971.162ENSPKIG00000014878-10070.981Paramormyrops_kingsleyae
ENSAMXG00000033347u2af2a8671.053ENSPSIG00000008014U2AF28471.216Pelodiscus_sinensis
ENSAMXG00000033347u2af2a8386.000ENSPMGG00000022980u2af2a8786.000Periophthalmus_magnuspinnatus
ENSAMXG00000033347u2af2a10084.504ENSPEMG00000007378U2af210090.190Peromyscus_maniculatus_bairdii
ENSAMXG00000033347u2af2a8375.510ENSPMAG00000004097u2af2a10069.017Petromyzon_marinus
ENSAMXG00000033347u2af2a10084.298ENSPCIG00000018013U2AF210083.851Phascolarctos_cinereus
ENSAMXG00000033347u2af2a9988.358ENSPFOG00000010799u2af2a10088.333Poecilia_formosa
ENSAMXG00000033347u2af2a9972.187ENSPFOG00000006433-10071.338Poecilia_formosa
ENSAMXG00000033347u2af2a10092.128ENSPLAG00000014365u2af2a10091.277Poecilia_latipinna
ENSAMXG00000033347u2af2a8678.571ENSPLAG00000003275-8479.692Poecilia_latipinna
ENSAMXG00000033347u2af2a10092.128ENSPMEG00000002969u2af2a10091.277Poecilia_mexicana
ENSAMXG00000033347u2af2a8678.325ENSPMEG00000003734-8479.434Poecilia_mexicana
ENSAMXG00000033347u2af2a9970.921ENSPREG00000013036-10072.848Poecilia_reticulata
ENSAMXG00000033347u2af2a10088.382ENSPREG00000008739u2af2a10088.358Poecilia_reticulata
ENSAMXG00000033347u2af2a5988.256ENSPPYG00000010429-7887.368Pongo_abelii
ENSAMXG00000033347u2af2a10069.342ENSPCAG00000014399-10068.866Procavia_capensis
ENSAMXG00000033347u2af2a8676.368ENSPCAG00000003709-9377.436Procavia_capensis
ENSAMXG00000033347u2af2a10084.504ENSPCOG00000025870U2AF210084.058Propithecus_coquereli
ENSAMXG00000033347u2af2a10084.091ENSPVAG00000004540U2AF210083.644Pteropus_vampyrus
ENSAMXG00000033347u2af2a10088.125ENSPNYG00000001438u2af2a10088.150Pundamilia_nyererei
ENSAMXG00000033347u2af2a9971.130ENSPNYG00000011605-10070.231Pundamilia_nyererei
ENSAMXG00000033347u2af2a10095.551ENSPNAG00000017620u2af2a10095.551Pygocentrus_nattereri
ENSAMXG00000033347u2af2a9990.192ENSPNAG00000027289u2af2b9989.339Pygocentrus_nattereri
ENSAMXG00000033347u2af2a9971.816ENSPNAG00000007182-10070.772Pygocentrus_nattereri
ENSAMXG00000033347u2af2a10084.647ENSRNOG00000015914U2af210084.200Rattus_norvegicus
ENSAMXG00000033347u2af2a10084.298ENSRBIG00000041018U2AF210083.851Rhinopithecus_bieti
ENSAMXG00000033347u2af2a10079.668ENSRROG00000031238-10079.626Rhinopithecus_roxellana
ENSAMXG00000033347u2af2a7988.410ENSRROG00000031103-9977.958Rhinopithecus_roxellana
ENSAMXG00000033347u2af2a10084.647ENSSBOG00000023891U2AF210084.200Saimiri_boliviensis_boliviensis
ENSAMXG00000033347u2af2a5578.405ENSSHAG00000001167U2AF26282.288Sarcophilus_harrisii
ENSAMXG00000033347u2af2a9972.025ENSSFOG00015003884-10071.399Scleropages_formosus
ENSAMXG00000033347u2af2a8793.137ENSSFOG00015019182u2af2b8693.846Scleropages_formosus
ENSAMXG00000033347u2af2a10090.249ENSSMAG00000012582u2af2a10091.702Scophthalmus_maximus
ENSAMXG00000033347u2af2a9971.250ENSSMAG00000013779-10070.231Scophthalmus_maximus
ENSAMXG00000033347u2af2a9992.324ENSSDUG00000009457u2af2a10091.471Seriola_dumerili
ENSAMXG00000033347u2af2a9670.253ENSSDUG00000021434-7977.750Seriola_dumerili
ENSAMXG00000033347u2af2a9670.253ENSSLDG00000016151-8377.750Seriola_lalandi_dorsalis
ENSAMXG00000033347u2af2a10092.340ENSSLDG00000022742u2af2a10091.489Seriola_lalandi_dorsalis
ENSAMXG00000033347u2af2a10084.536ENSSPUG00000010229U2AF210084.156Sphenodon_punctatus
ENSAMXG00000033347u2af2a9971.339ENSSPAG00000005241-10070.440Stegastes_partitus
ENSAMXG00000033347u2af2a9792.070ENSSPAG00000022519u2af2a10088.358Stegastes_partitus
ENSAMXG00000033347u2af2a10086.809ENSSSCG00000034815U2AF210086.170Sus_scrofa
ENSAMXG00000033347u2af2a9790.308ENSTRUG00000005514u2af2a8592.051Takifugu_rubripes
ENSAMXG00000033347u2af2a10090.021ENSTNIG00000008106U2AF210088.333Tetraodon_nigroviridis
ENSAMXG00000033347u2af2a9971.277ENSTNIG00000011257-10070.362Tetraodon_nigroviridis
ENSAMXG00000033347u2af2a7984.140ENSTBEG00000009104U2AF29286.533Tupaia_belangeri
ENSAMXG00000033347u2af2a10084.504ENSTTRG00000000987U2AF210084.058Tursiops_truncatus
ENSAMXG00000033347u2af2a8690.640ENSUAMG00000019883U2AF28591.327Ursus_americanus
ENSAMXG00000033347u2af2a8690.640ENSUMAG00000024586U2AF210090.190Ursus_maritimus
ENSAMXG00000033347u2af2a8889.104ENSVVUG00000006956U2AF26981.120Vulpes_vulpes
ENSAMXG00000033347u2af2a10085.804ENSXETG00000019128u2af210084.969Xenopus_tropicalis
ENSAMXG00000033347u2af2a8394.359ENSXCOG00000019406u2af2a8794.359Xiphophorus_couchianus
ENSAMXG00000033347u2af2a10092.128ENSXMAG00000011979u2af2a10091.277Xiphophorus_maculatus
ENSAMXG00000033347u2af2a9970.502ENSXMAG00000000768-9670.981Xiphophorus_maculatus

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