EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033374 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2875 bases
Position: chrAPWO02001238.1:10317-13191
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000046314	MMR_HSR1	PF01926.23	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000039589	-	447	-	ENSAMXP00000046314	148 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033374's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033374	-	70	32.692	ENSAMXG00000031683	-	59	32.692
ENSAMXG00000033374	-	73	46.364	ENSAMXG00000042243	-	52	46.364
ENSAMXG00000033374	-	78	47.458	ENSAMXG00000030472	-	50	46.667
ENSAMXG00000033374	-	90	34.646	ENSAMXG00000030744	-	50	34.646
ENSAMXG00000033374	-	76	49.558	ENSAMXG00000038694	-	75	49.558
ENSAMXG00000033374	-	77	43.478	ENSAMXG00000035925	-	51	43.478
ENSAMXG00000033374	-	80	38.017	ENSAMXG00000043950	-	59	38.017
ENSAMXG00000033374	-	76	54.386	ENSAMXG00000041888	-	55	54.386
ENSAMXG00000033374	-	84	42.063	ENSAMXG00000034405	-	87	42.063
ENSAMXG00000033374	-	82	41.935	ENSAMXG00000033160	-	54	41.935
ENSAMXG00000033374	-	85	42.982	ENSAMXG00000038070	-	58	42.982
ENSAMXG00000033374	-	82	42.857	ENSAMXG00000032368	-	50	42.735
ENSAMXG00000033374	-	76	43.363	ENSAMXG00000031676	-	65	43.363
ENSAMXG00000033374	-	76	46.018	ENSAMXG00000038335	-	50	46.018
ENSAMXG00000033374	-	82	44.961	ENSAMXG00000042475	-	80	44.961
ENSAMXG00000033374	-	84	34.351	ENSAMXG00000009216	-	60	34.351
ENSAMXG00000033374	-	78	39.655	ENSAMXG00000037755	-	60	39.655
ENSAMXG00000033374	-	87	59.690	ENSAMXG00000002562	-	86	48.062
ENSAMXG00000033374	-	81	48.760	ENSAMXG00000041240	-	50	48.760
ENSAMXG00000033374	-	76	49.123	ENSAMXG00000029911	-	72	49.123
ENSAMXG00000033374	-	82	41.463	ENSAMXG00000038457	-	54	41.071
ENSAMXG00000033374	-	82	37.302	ENSAMXG00000019109	-	56	37.302
ENSAMXG00000033374	-	51	40.789	ENSAMXG00000032139	-	64	40.789
ENSAMXG00000033374	-	82	45.968	ENSAMXG00000026503	-	52	45.968
ENSAMXG00000033374	-	80	43.333	ENSAMXG00000036317	-	54	43.333
ENSAMXG00000033374	-	78	41.935	ENSAMXG00000035621	-	51	41.935
ENSAMXG00000033374	-	80	51.240	ENSAMXG00000002402	-	50	51.240
ENSAMXG00000033374	-	76	39.823	ENSAMXG00000031180	-	50	39.823
ENSAMXG00000033374	-	75	40.179	ENSAMXG00000030826	-	54	40.179
ENSAMXG00000033374	-	78	42.975	ENSAMXG00000041745	-	56	42.975
ENSAMXG00000033374	-	77	39.130	ENSAMXG00000036272	-	55	37.719
ENSAMXG00000033374	-	75	39.640	ENSAMXG00000031086	-	51	39.640
ENSAMXG00000033374	-	78	43.103	ENSAMXG00000042848	-	57	42.149
ENSAMXG00000033374	-	92	43.796	ENSAMXG00000039994	-	57	43.796
ENSAMXG00000033374	-	86	49.612	ENSAMXG00000037339	-	87	49.612

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033374	-	84	40.602	ENSAPOG00000008529	-	50	40.602	Acanthochromis_polyacanthus
ENSAMXG00000033374	-	93	37.594	ENSAPOG00000022321	-	59	37.594	Acanthochromis_polyacanthus
ENSAMXG00000033374	-	76	42.478	ENSAPOG00000001075	-	51	42.478	Acanthochromis_polyacanthus
ENSAMXG00000033374	-	82	33.600	ENSAPOG00000008819	-	57	34.400	Acanthochromis_polyacanthus
ENSAMXG00000033374	-	78	47.009	ENSACIG00000012761	-	51	47.009	Amphilophus_citrinellus
ENSAMXG00000033374	-	76	31.579	ENSACIG00000019509	-	52	31.579	Amphilophus_citrinellus
ENSAMXG00000033374	-	79	30.159	ENSACIG00000014737	-	59	30.159	Amphilophus_citrinellus
ENSAMXG00000033374	-	76	38.596	ENSACIG00000022374	-	57	38.596	Amphilophus_citrinellus
ENSAMXG00000033374	-	79	37.288	ENSACIG00000003050	-	51	37.288	Amphilophus_citrinellus
ENSAMXG00000033374	-	79	39.496	ENSACIG00000005573	-	50	39.496	Amphilophus_citrinellus
ENSAMXG00000033374	-	80	40.336	ENSAOCG00000016099	-	52	40.336	Amphiprion_ocellaris
ENSAMXG00000033374	-	80	40.336	ENSAPEG00000002121	-	52	40.336	Amphiprion_percula
ENSAMXG00000033374	-	82	40.164	ENSAPEG00000003513	-	83	40.164	Amphiprion_percula
ENSAMXG00000033374	-	80	41.322	ENSAPEG00000021653	si:dkey-73p2.1	77	43.636	Amphiprion_percula
ENSAMXG00000033374	-	86	37.209	ENSATEG00000011891	-	81	37.209	Anabas_testudineus
ENSAMXG00000033374	-	61	44.565	ENSATEG00000011771	-	56	44.565	Anabas_testudineus
ENSAMXG00000033374	-	80	39.167	ENSATEG00000011594	-	50	39.167	Anabas_testudineus
ENSAMXG00000033374	-	80	39.167	ENSATEG00000011978	-	60	39.167	Anabas_testudineus
ENSAMXG00000033374	-	76	38.596	ENSATEG00000011979	-	53	38.596	Anabas_testudineus
ENSAMXG00000033374	-	81	33.884	ENSACLG00000011585	-	58	33.884	Astatotilapia_calliptera
ENSAMXG00000033374	-	80	39.098	ENSACLG00000003393	-	53	39.098	Astatotilapia_calliptera
ENSAMXG00000033374	-	78	41.463	ENSACLG00000005319	-	56	41.463	Astatotilapia_calliptera
ENSAMXG00000033374	-	79	43.220	ENSACLG00000005232	-	59	43.220	Astatotilapia_calliptera
ENSAMXG00000033374	-	86	32.593	ENSACLG00000023739	-	59	32.593	Astatotilapia_calliptera
ENSAMXG00000033374	-	74	36.036	ENSCSEG00000001225	si:ch211-113e8.6	75	36.036	Cynoglossus_semilaevis
ENSAMXG00000033374	-	79	34.146	ENSCVAG00000016807	-	54	34.146	Cyprinodon_variegatus
ENSAMXG00000033374	-	78	41.026	ENSCVAG00000018876	-	53	41.026	Cyprinodon_variegatus
ENSAMXG00000033374	-	80	45.378	ENSCVAG00000011321	-	54	45.000	Cyprinodon_variegatus
ENSAMXG00000033374	-	80	42.149	ENSCVAG00000018895	-	55	42.149	Cyprinodon_variegatus
ENSAMXG00000033374	-	76	41.739	ENSCVAG00000003277	-	53	41.739	Cyprinodon_variegatus
ENSAMXG00000033374	-	86	40.625	ENSCVAG00000009295	-	50	40.625	Cyprinodon_variegatus
ENSAMXG00000033374	-	86	39.844	ENSCVAG00000007737	-	54	39.844	Cyprinodon_variegatus
ENSAMXG00000033374	-	74	39.640	ENSCVAG00000013717	-	50	39.640	Cyprinodon_variegatus
ENSAMXG00000033374	-	77	40.000	ENSDARG00000035088	si:ch211-254c8.3	55	36.667	Danio_rerio
ENSAMXG00000033374	-	80	50.407	ENSDARG00000088906	CABZ01059403.1	61	50.407	Danio_rerio
ENSAMXG00000033374	-	81	37.190	ENSDARG00000052899	CU550714.1	58	37.190	Danio_rerio
ENSAMXG00000033374	-	76	39.823	ENSDARG00000076269	zgc:172131	51	39.823	Danio_rerio
ENSAMXG00000033374	-	74	39.640	ENSDARG00000074610	si:ch211-113e8.6	75	39.640	Danio_rerio
ENSAMXG00000033374	-	86	36.364	ENSDARG00000112569	BX321875.3	58	36.364	Danio_rerio
ENSAMXG00000033374	-	77	39.130	ENSFHEG00000008610	-	53	39.130	Fundulus_heteroclitus
ENSAMXG00000033374	-	84	35.156	ENSGAFG00000002953	-	52	35.156	Gambusia_affinis
ENSAMXG00000033374	-	80	35.200	ENSGAFG00000000310	-	50	35.200	Gambusia_affinis
ENSAMXG00000033374	-	81	33.884	ENSGACG00000018974	-	53	33.884	Gasterosteus_aculeatus
ENSAMXG00000033374	-	80	39.098	ENSHBUG00000023472	-	53	39.098	Haplochromis_burtoni
ENSAMXG00000033374	-	57	40.698	ENSHBUG00000000685	-	61	40.698	Haplochromis_burtoni
ENSAMXG00000033374	-	80	40.000	ENSHBUG00000004059	-	52	40.000	Haplochromis_burtoni
ENSAMXG00000033374	-	84	40.152	ENSIPUG00000000074	-	74	37.984	Ictalurus_punctatus
ENSAMXG00000033374	-	78	37.931	ENSIPUG00000000911	-	57	37.931	Ictalurus_punctatus
ENSAMXG00000033374	-	78	45.690	ENSIPUG00000000899	-	55	45.690	Ictalurus_punctatus
ENSAMXG00000033374	-	59	39.080	ENSIPUG00000007177	-	69	39.080	Ictalurus_punctatus
ENSAMXG00000033374	-	76	39.823	ENSKMAG00000010997	-	60	39.823	Kryptolebias_marmoratus
ENSAMXG00000033374	-	78	38.983	ENSKMAG00000016762	-	54	38.983	Kryptolebias_marmoratus
ENSAMXG00000033374	-	78	39.496	ENSKMAG00000016747	-	52	39.496	Kryptolebias_marmoratus
ENSAMXG00000033374	-	78	41.880	ENSLBEG00000017965	-	64	41.525	Labrus_bergylta
ENSAMXG00000033374	-	78	41.964	ENSLBEG00000010225	-	50	41.964	Labrus_bergylta
ENSAMXG00000033374	-	93	37.410	ENSLBEG00000017980	-	86	37.410	Labrus_bergylta
ENSAMXG00000033374	-	82	37.398	ENSLBEG00000017905	-	53	37.705	Labrus_bergylta
ENSAMXG00000033374	-	78	37.069	ENSLOCG00000011904	-	58	37.069	Lepisosteus_oculatus
ENSAMXG00000033374	-	85	41.791	ENSLOCG00000000328	-	54	41.791	Lepisosteus_oculatus
ENSAMXG00000033374	-	77	40.171	ENSLOCG00000011098	-	63	40.171	Lepisosteus_oculatus
ENSAMXG00000033374	-	76	38.596	ENSLOCG00000013437	-	51	38.596	Lepisosteus_oculatus
ENSAMXG00000033374	-	84	36.719	ENSLOCG00000003059	-	58	36.719	Lepisosteus_oculatus
ENSAMXG00000033374	-	81	41.935	ENSLOCG00000011913	-	61	41.935	Lepisosteus_oculatus
ENSAMXG00000033374	-	91	37.956	ENSMAMG00000012642	-	54	37.956	Mastacembelus_armatus
ENSAMXG00000033374	-	78	41.026	ENSMAMG00000012570	-	70	42.105	Mastacembelus_armatus
ENSAMXG00000033374	-	82	34.426	ENSMZEG00005020531	-	60	34.426	Maylandia_zebra
ENSAMXG00000033374	-	86	32.593	ENSMZEG00005012891	-	59	32.593	Maylandia_zebra
ENSAMXG00000033374	-	85	33.858	ENSMZEG00005027522	-	64	33.858	Maylandia_zebra
ENSAMXG00000033374	-	86	38.281	ENSMZEG00005027842	-	68	38.281	Maylandia_zebra
ENSAMXG00000033374	-	75	42.857	ENSMZEG00005001649	-	50	42.857	Maylandia_zebra
ENSAMXG00000033374	-	78	37.069	ENSMALG00000009159	-	51	32.710	Monopterus_albus
ENSAMXG00000033374	-	68	41.667	ENSNBRG00000020578	-	50	41.667	Neolamprologus_brichardi
ENSAMXG00000033374	-	83	41.406	ENSNBRG00000000605	-	52	41.406	Neolamprologus_brichardi
ENSAMXG00000033374	-	80	36.641	ENSNBRG00000002144	-	56	36.641	Neolamprologus_brichardi
ENSAMXG00000033374	-	70	41.905	ENSNBRG00000009535	si:ch211-113e8.6	98	41.905	Neolamprologus_brichardi
ENSAMXG00000033374	-	80	39.496	ENSNBRG00000024251	-	55	39.496	Neolamprologus_brichardi
ENSAMXG00000033374	-	87	33.835	ENSNBRG00000017779	-	55	34.351	Neolamprologus_brichardi
ENSAMXG00000033374	-	78	42.735	ENSNBRG00000023276	-	76	42.735	Neolamprologus_brichardi
ENSAMXG00000033374	-	77	41.739	ENSONIG00000020390	-	50	41.739	Oreochromis_niloticus
ENSAMXG00000033374	-	80	30.400	ENSONIG00000020856	-	57	30.400	Oreochromis_niloticus
ENSAMXG00000033374	-	86	37.984	ENSONIG00000016497	-	54	37.984	Oreochromis_niloticus
ENSAMXG00000033374	-	80	48.246	ENSONIG00000009177	-	60	48.246	Oreochromis_niloticus
ENSAMXG00000033374	-	85	33.846	ENSONIG00000017884	-	68	33.846	Oreochromis_niloticus
ENSAMXG00000033374	-	77	34.783	ENSONIG00000005037	-	50	34.783	Oreochromis_niloticus
ENSAMXG00000033374	-	85	33.582	ENSONIG00000009342	-	50	33.582	Oreochromis_niloticus
ENSAMXG00000033374	-	78	39.640	ENSORLG00000026065	-	51	39.640	Oryzias_latipes
ENSAMXG00000033374	-	85	39.370	ENSORLG00020015638	si:ch73-285p12.4	50	42.478	Oryzias_latipes_hni
ENSAMXG00000033374	-	86	37.984	ENSORLG00020017350	-	57	37.984	Oryzias_latipes_hni
ENSAMXG00000033374	-	87	36.154	ENSORLG00015018237	-	83	36.154	Oryzias_latipes_hsok
ENSAMXG00000033374	-	92	36.957	ENSORLG00015018187	-	79	36.957	Oryzias_latipes_hsok
ENSAMXG00000033374	-	81	39.516	ENSOMEG00000010833	-	51	39.516	Oryzias_melastigma
ENSAMXG00000033374	-	78	41.880	ENSOMEG00000009406	-	51	41.880	Oryzias_melastigma
ENSAMXG00000033374	-	81	39.669	ENSOMEG00000018427	-	53	39.669	Oryzias_melastigma
ENSAMXG00000033374	-	78	37.931	ENSOMEG00000009395	-	50	37.931	Oryzias_melastigma
ENSAMXG00000033374	-	82	37.705	ENSOMEG00000018354	-	62	37.705	Oryzias_melastigma
ENSAMXG00000033374	-	76	37.168	ENSPKIG00000014014	zgc:172131	58	37.168	Paramormyrops_kingsleyae
ENSAMXG00000033374	-	76	36.283	ENSPKIG00000014076	zgc:172131	54	36.283	Paramormyrops_kingsleyae
ENSAMXG00000033374	-	76	37.168	ENSPKIG00000014085	zgc:172131	54	37.168	Paramormyrops_kingsleyae
ENSAMXG00000033374	-	83	45.378	ENSPMGG00000017780	-	51	45.378	Periophthalmus_magnuspinnatus
ENSAMXG00000033374	-	90	35.507	ENSPMGG00000008073	-	68	34.711	Periophthalmus_magnuspinnatus
ENSAMXG00000033374	-	61	40.659	ENSPMGG00000013552	-	84	40.659	Periophthalmus_magnuspinnatus
ENSAMXG00000033374	-	74	39.474	ENSPMGG00000008403	-	77	39.474	Periophthalmus_magnuspinnatus
ENSAMXG00000033374	-	69	38.835	ENSPMGG00000009271	-	77	38.835	Periophthalmus_magnuspinnatus
ENSAMXG00000033374	-	78	41.379	ENSPMGG00000001115	-	63	41.379	Periophthalmus_magnuspinnatus
ENSAMXG00000033374	-	84	36.000	ENSPMGG00000001647	-	50	36.000	Periophthalmus_magnuspinnatus
ENSAMXG00000033374	-	77	41.739	ENSPMGG00000001625	-	52	41.739	Periophthalmus_magnuspinnatus
ENSAMXG00000033374	-	84	38.000	ENSPFOG00000018914	-	55	38.000	Poecilia_formosa
ENSAMXG00000033374	-	86	40.000	ENSPFOG00000023369	-	53	41.667	Poecilia_formosa
ENSAMXG00000033374	-	77	35.965	ENSPFOG00000001711	-	53	35.965	Poecilia_formosa
ENSAMXG00000033374	-	77	41.739	ENSPFOG00000023575	-	52	41.739	Poecilia_formosa
ENSAMXG00000033374	-	79	35.000	ENSPFOG00000013144	-	52	35.000	Poecilia_formosa
ENSAMXG00000033374	-	76	31.579	ENSPFOG00000004636	-	54	31.579	Poecilia_formosa
ENSAMXG00000033374	-	81	36.364	ENSPFOG00000001396	-	54	36.364	Poecilia_formosa
ENSAMXG00000033374	-	82	43.651	ENSPLAG00000010015	-	52	45.614	Poecilia_latipinna
ENSAMXG00000033374	-	79	34.167	ENSPMEG00000002483	-	54	34.167	Poecilia_mexicana
ENSAMXG00000033374	-	77	38.261	ENSPMEG00000014325	-	58	38.261	Poecilia_mexicana
ENSAMXG00000033374	-	80	34.167	ENSPMEG00000021963	-	90	34.167	Poecilia_mexicana
ENSAMXG00000033374	-	68	39.216	ENSPMEG00000019710	-	53	39.216	Poecilia_mexicana
ENSAMXG00000033374	-	79	42.373	ENSPREG00000015263	-	56	42.735	Poecilia_reticulata
ENSAMXG00000033374	-	85	39.000	ENSPREG00000003230	-	53	39.000	Poecilia_reticulata
ENSAMXG00000033374	-	78	38.793	ENSPREG00000017019	-	54	38.793	Poecilia_reticulata
ENSAMXG00000033374	-	76	35.088	ENSPREG00000005902	-	55	35.088	Poecilia_reticulata
ENSAMXG00000033374	-	86	34.884	ENSPNYG00000021131	-	61	34.884	Pundamilia_nyererei
ENSAMXG00000033374	-	80	43.478	ENSPNYG00000023532	-	50	43.478	Pundamilia_nyererei
ENSAMXG00000033374	-	86	37.705	ENSPNAG00000008976	-	67	37.705	Pygocentrus_nattereri
ENSAMXG00000033374	-	80	34.746	ENSPNAG00000022633	-	50	34.746	Pygocentrus_nattereri
ENSAMXG00000033374	-	82	33.824	ENSPNAG00000008969	-	65	33.824	Pygocentrus_nattereri
ENSAMXG00000033374	-	91	32.374	ENSSFOG00015007874	-	64	32.374	Scleropages_formosus
ENSAMXG00000033374	-	84	35.659	ENSSMAG00000016061	-	54	35.659	Scophthalmus_maximus
ENSAMXG00000033374	-	86	46.923	ENSSDUG00000020733	-	54	46.923	Seriola_dumerili
ENSAMXG00000033374	-	76	42.478	ENSSLDG00000024641	-	57	42.478	Seriola_lalandi_dorsalis
ENSAMXG00000033374	-	76	36.842	ENSSLDG00000005616	-	55	36.842	Seriola_lalandi_dorsalis
ENSAMXG00000033374	-	82	40.800	ENSSLDG00000009117	-	62	40.800	Seriola_lalandi_dorsalis
ENSAMXG00000033374	-	82	41.463	ENSSPAG00000013831	-	78	41.463	Stegastes_partitus
ENSAMXG00000033374	-	83	39.200	ENSSPAG00000002678	-	51	39.516	Stegastes_partitus
ENSAMXG00000033374	-	76	37.391	ENSSPAG00000019136	-	51	37.391	Stegastes_partitus
ENSAMXG00000033374	-	88	38.525	ENSSPAG00000013926	-	54	37.903	Stegastes_partitus
ENSAMXG00000033374	-	78	42.735	ENSSPAG00000016454	-	59	42.735	Stegastes_partitus
ENSAMXG00000033374	-	76	37.719	ENSSPAG00000020351	-	56	37.719	Stegastes_partitus
ENSAMXG00000033374	-	77	37.815	ENSTNIG00000001262	-	53	37.815	Tetraodon_nigroviridis
ENSAMXG00000033374	-	81	36.641	ENSTNIG00000010832	-	56	36.641	Tetraodon_nigroviridis
ENSAMXG00000033374	-	90	38.261	ENSXCOG00000006733	-	56	38.261	Xiphophorus_couchianus
ENSAMXG00000033374	-	79	33.333	ENSXCOG00000014967	zgc:172131	57	33.333	Xiphophorus_couchianus
ENSAMXG00000033374	-	78	38.793	ENSXCOG00000006729	-	52	38.793	Xiphophorus_couchianus
ENSAMXG00000033374	-	78	37.931	ENSXMAG00000022624	-	51	37.931	Xiphophorus_maculatus
ENSAMXG00000033374	-	80	36.000	ENSXMAG00000006639	-	53	36.000	Xiphophorus_maculatus
ENSAMXG00000033374	-	82	36.066	ENSXMAG00000027763	-	51	36.066	Xiphophorus_maculatus
ENSAMXG00000033374	-	83	39.516	ENSXMAG00000024908	-	55	38.596	Xiphophorus_maculatus
ENSAMXG00000033374	-	83	38.583	ENSXMAG00000021690	-	50	38.583	Xiphophorus_maculatus
ENSAMXG00000033374	-	91	33.333	ENSXMAG00000026876	-	64	33.333	Xiphophorus_maculatus
ENSAMXG00000033374	-	74	39.640	ENSXMAG00000025223	-	53	39.640	Xiphophorus_maculatus