EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033384 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3430 bases
Position: chrAPWO02000180.1:1293741-1297170
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045320	RVT_1	PF00078.27	2.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055940	-	1647	-	ENSAMXP00000045320	548 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033384's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033384's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033384	-	78	39.556	ENSAMXG00000035718	-	88	39.556
ENSAMXG00000033384	-	68	92.481	ENSAMXG00000038901	-	85	92.481

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033384	-	56	47.368	ENSACIG00000020856	-	68	45.205	Amphilophus_citrinellus
ENSAMXG00000033384	-	53	34.278	ENSACIG00000020849	-	92	34.278	Amphilophus_citrinellus
ENSAMXG00000033384	-	54	33.956	ENSHBUG00000003796	-	80	33.956	Haplochromis_burtoni