EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Description

Ensembl ID: ENSAMXG00000033390 (Gene tree)
Gene ID: 103047011
Gene Symbol: rap1aa
Alias: Rap1b|rap1a|wu:fc66g06|zgc:86676
Full Name: RAP1A%2C member of RAS oncogene family
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 9192 bases
Position: chr6:14484265-14493456
Accession: 103047011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000054379	GTP_EFTU	PF00009.27	2.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053140	-	5289	XM_022670262	ENSAMXP00000051548	185 (aa)	XP_022525983	UPI000BBE01FF
ENSAMXT00000035667	-	414	-	ENSAMXP00000038730	137 (aa)	-	-
ENSAMXT00000033793	-	5157	-	ENSAMXP00000054379	195 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033390's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04010	MAPK signaling pathway	KEGG
amex04510	Focal adhesion	KEGG
amex04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033390	rap1aa	61	38.843	ENSAMXG00000037428	-	57	38.333
ENSAMXG00000033390	rap1aa	82	33.537	ENSAMXG00000025889	RAB9A	81	33.537
ENSAMXG00000033390	rap1aa	92	30.000	ENSAMXG00000040879	rab25a	83	30.000
ENSAMXG00000033390	rap1aa	78	36.538	ENSAMXG00000031957	zgc:100918	76	36.538
ENSAMXG00000033390	rap1aa	79	35.484	ENSAMXG00000036179	rab5aa	71	35.484
ENSAMXG00000033390	rap1aa	78	32.468	ENSAMXG00000038243	si:dkey-16l2.16	78	32.653
ENSAMXG00000033390	rap1aa	82	30.769	ENSAMXG00000035770	rasl11a	66	30.769
ENSAMXG00000033390	rap1aa	77	30.435	ENSAMXG00000032663	si:dkey-13a21.4	72	30.435
ENSAMXG00000033390	rap1aa	87	35.294	ENSAMXG00000032564	rab1ab	83	35.294
ENSAMXG00000033390	rap1aa	78	52.597	ENSAMXG00000033764	si:ch73-116o1.2	74	52.597
ENSAMXG00000033390	rap1aa	78	37.662	ENSAMXG00000040126	-	56	37.662
ENSAMXG00000033390	rap1aa	80	33.121	ENSAMXG00000004630	rab6ba	82	33.121
ENSAMXG00000033390	rap1aa	79	32.692	ENSAMXG00000041657	rab39ba	73	32.692
ENSAMXG00000033390	rap1aa	94	36.413	ENSAMXG00000039486	zgc:171927	83	36.413
ENSAMXG00000033390	rap1aa	78	30.519	ENSAMXG00000039737	RAB19	70	30.519
ENSAMXG00000033390	rap1aa	80	57.692	ENSAMXG00000035885	hrasa	81	57.692
ENSAMXG00000033390	rap1aa	76	36.667	ENSAMXG00000040460	zgc:101559	61	36.667
ENSAMXG00000033390	rap1aa	79	32.075	ENSAMXG00000026476	rab9b	71	32.075
ENSAMXG00000033390	rap1aa	79	33.548	ENSAMXG00000043951	rab15	73	33.548
ENSAMXG00000033390	rap1aa	78	33.117	ENSAMXG00000042655	rab11bb	70	33.117
ENSAMXG00000033390	rap1aa	79	34.839	ENSAMXG00000035919	rab5ab	71	34.839
ENSAMXG00000033390	rap1aa	98	33.163	ENSAMXG00000030712	rab13	96	33.163
ENSAMXG00000033390	rap1aa	76	36.424	ENSAMXG00000040286	rab33ba	63	36.424
ENSAMXG00000033390	rap1aa	74	46.207	ENSAMXG00000029130	-	78	46.207
ENSAMXG00000033390	rap1aa	75	45.890	ENSAMXG00000033069	si:cabz01085950.1	71	45.890
ENSAMXG00000033390	rap1aa	78	32.468	ENSAMXG00000037623	-	70	32.468
ENSAMXG00000033390	rap1aa	80	58.974	ENSAMXG00000017217	kras	82	58.974
ENSAMXG00000033390	rap1aa	78	38.961	ENSAMXG00000036772	rab2a	72	38.961
ENSAMXG00000033390	rap1aa	80	57.692	ENSAMXG00000033907	hrasb	81	57.692
ENSAMXG00000033390	rap1aa	78	35.256	ENSAMXG00000002254	-	75	35.256
ENSAMXG00000033390	rap1aa	78	37.662	ENSAMXG00000009640	rab14	71	37.662
ENSAMXG00000033390	rap1aa	98	33.163	ENSAMXG00000013054	rab22a	98	33.163
ENSAMXG00000033390	rap1aa	79	33.333	ENSAMXG00000003717	rab39bb	73	33.333
ENSAMXG00000033390	rap1aa	77	36.184	ENSAMXG00000009935	rab30	60	36.184
ENSAMXG00000033390	rap1aa	76	31.333	ENSAMXG00000024632	rab11al	72	31.333
ENSAMXG00000033390	rap1aa	77	32.895	ENSAMXG00000003155	rab11a	70	32.895
ENSAMXG00000033390	rap1aa	78	35.065	ENSAMXG00000042419	rab3c	70	35.065
ENSAMXG00000033390	rap1aa	79	35.000	ENSAMXG00000033470	RAB15	72	35.000
ENSAMXG00000033390	rap1aa	78	56.209	ENSAMXG00000010334	rras	75	56.209
ENSAMXG00000033390	rap1aa	95	31.720	ENSAMXG00000032547	rab6a	88	31.720
ENSAMXG00000033390	rap1aa	80	32.484	ENSAMXG00000014960	rab23	80	34.524
ENSAMXG00000033390	rap1aa	77	34.437	ENSAMXG00000042073	rab18b	73	34.437
ENSAMXG00000033390	rap1aa	79	36.129	ENSAMXG00000043717	rab5c	69	36.129
ENSAMXG00000033390	rap1aa	68	34.074	ENSAMXG00000029699	nkiras1	68	34.074
ENSAMXG00000033390	rap1aa	77	32.237	ENSAMXG00000029712	rab25b	71	32.237
ENSAMXG00000033390	rap1aa	80	33.758	ENSAMXG00000033216	rab41	79	33.758
ENSAMXG00000033390	rap1aa	79	36.129	ENSAMXG00000037267	-	73	36.129
ENSAMXG00000033390	rap1aa	78	35.897	ENSAMXG00000032027	rab7a	75	35.897
ENSAMXG00000033390	rap1aa	82	30.864	ENSAMXG00000032729	rab42a	76	30.864
ENSAMXG00000033390	rap1aa	78	52.597	ENSAMXG00000010919	mras	74	52.597
ENSAMXG00000033390	rap1aa	97	30.612	ENSAMXG00000036330	RAB38	91	30.612
ENSAMXG00000033390	rap1aa	87	35.632	ENSAMXG00000003547	rab1ba	75	35.632
ENSAMXG00000033390	rap1aa	79	33.333	ENSAMXG00000026059	RAB9A	79	33.333
ENSAMXG00000033390	rap1aa	69	34.058	ENSAMXG00000032340	nkiras2	72	34.058
ENSAMXG00000033390	rap1aa	78	35.714	ENSAMXG00000034850	-	75	35.714
ENSAMXG00000033390	rap1aa	78	35.065	ENSAMXG00000039865	rab35b	75	35.065
ENSAMXG00000033390	rap1aa	78	34.416	ENSAMXG00000040604	-	75	34.416
ENSAMXG00000033390	rap1aa	80	58.333	ENSAMXG00000012327	nras	86	58.333
ENSAMXG00000033390	rap1aa	79	36.943	ENSAMXG00000004882	rab12	63	36.943