EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033455 (Gene tree)
Gene ID: 103034229
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3606 bases
Position: chrAPWO02001490.1:162488-166093
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038207	RVT_1	PF00078.27	1.7e-22	1	1
ENSAMXP00000038207	RNase_H	PF00075.24	6.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000043081	-	3606	-	ENSAMXP00000038207	1201 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033455's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033455's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033455	-	86	36.150	ENSAMXG00000038047	-	79	36.150
ENSAMXG00000033455	-	85	32.344	ENSAMXG00000040526	-	85	32.316
ENSAMXG00000033455	-	86	36.210	ENSAMXG00000040932	-	81	36.210
ENSAMXG00000033455	-	50	31.720	ENSAMXG00000037864	-	53	31.720
ENSAMXG00000033455	-	80	30.870	ENSAMXG00000033060	-	82	30.567
ENSAMXG00000033455	-	72	37.798	ENSAMXG00000038483	-	66	37.798

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033455	-	73	37.360	ENSAPEG00000000438	-	97	37.360	Amphiprion_percula
ENSAMXG00000033455	-	99	49.706	ENSACLG00000006254	-	85	49.706	Astatotilapia_calliptera
ENSAMXG00000033455	-	80	35.417	ENSACLG00000014318	-	71	35.417	Astatotilapia_calliptera
ENSAMXG00000033455	-	86	50.874	ENSACLG00000023027	-	83	50.874	Astatotilapia_calliptera
ENSAMXG00000033455	-	59	35.417	ENSACLG00000005138	-	79	35.417	Astatotilapia_calliptera
ENSAMXG00000033455	-	99	52.799	ENSACLG00000003782	-	87	52.799	Astatotilapia_calliptera
ENSAMXG00000033455	-	70	34.346	ENSBTAG00000052165	-	83	34.346	Bos_taurus
ENSAMXG00000033455	-	50	30.995	ENSCPBG00000009921	-	75	30.506	Chrysemys_picta_bellii
ENSAMXG00000033455	-	68	35.817	ENSCPBG00000009184	-	88	35.817	Chrysemys_picta_bellii
ENSAMXG00000033455	-	89	53.940	ENSCSEG00000018136	-	85	53.940	Cynoglossus_semilaevis
ENSAMXG00000033455	-	99	32.315	ENSCSEG00000019226	-	67	32.476	Cynoglossus_semilaevis
ENSAMXG00000033455	-	89	53.940	ENSCSEG00000012922	-	85	53.940	Cynoglossus_semilaevis
ENSAMXG00000033455	-	89	53.940	ENSCSEG00000013867	-	85	53.940	Cynoglossus_semilaevis
ENSAMXG00000033455	-	89	53.940	ENSCSEG00000009059	-	85	53.940	Cynoglossus_semilaevis
ENSAMXG00000033455	-	89	53.940	ENSCSEG00000011566	-	85	53.940	Cynoglossus_semilaevis
ENSAMXG00000033455	-	70	34.109	ENSECAG00000034459	-	76	33.527	Equus_caballus
ENSAMXG00000033455	-	70	32.555	ENSGALG00000050905	-	90	32.205	Gallus_gallus
ENSAMXG00000033455	-	70	32.322	ENSGALG00000053504	-	90	31.972	Gallus_gallus
ENSAMXG00000033455	-	98	33.251	ENSLBEG00000013565	-	87	33.251	Labrus_bergylta
ENSAMXG00000033455	-	98	50.211	ENSMAMG00000010978	-	96	50.211	Mastacembelus_armatus
ENSAMXG00000033455	-	78	45.614	ENSMODG00000027641	-	84	45.614	Monodelphis_domestica
ENSAMXG00000033455	-	78	45.614	ENSMODG00000028385	-	84	45.614	Monodelphis_domestica
ENSAMXG00000033455	-	50	32.358	ENSMODG00000028325	-	94	32.683	Monodelphis_domestica
ENSAMXG00000033455	-	63	31.964	ENSMODG00000029316	-	92	31.964	Monodelphis_domestica
ENSAMXG00000033455	-	74	33.112	ENSMODG00000029722	-	80	33.223	Monodelphis_domestica
ENSAMXG00000033455	-	74	32.669	ENSMODG00000029740	-	79	32.558	Monodelphis_domestica
ENSAMXG00000033455	-	61	32.105	ENSMODG00000028504	-	81	32.105	Monodelphis_domestica
ENSAMXG00000033455	-	73	33.111	ENSMODG00000027661	-	76	33.221	Monodelphis_domestica
ENSAMXG00000033455	-	62	32.110	ENSMODG00000027664	-	98	32.110	Monodelphis_domestica
ENSAMXG00000033455	-	56	32.504	ENSMODG00000027851	-	79	32.357	Monodelphis_domestica
ENSAMXG00000033455	-	65	45.614	ENSMODG00000027448	-	97	45.614	Monodelphis_domestica
ENSAMXG00000033455	-	53	33.792	ENSMODG00000029647	-	79	33.437	Monodelphis_domestica
ENSAMXG00000033455	-	59	45.614	ENSMODG00000028686	-	95	45.614	Monodelphis_domestica
ENSAMXG00000033455	-	78	45.614	ENSMODG00000029698	-	84	45.614	Monodelphis_domestica
ENSAMXG00000033455	-	82	42.000	ENSMODG00000027428	-	80	42.000	Monodelphis_domestica
ENSAMXG00000033455	-	78	45.614	ENSMODG00000028573	-	84	45.614	Monodelphis_domestica
ENSAMXG00000033455	-	60	32.429	ENSMODG00000028692	-	99	32.429	Monodelphis_domestica
ENSAMXG00000033455	-	95	51.183	ENSONIG00000021180	-	94	51.183	Oreochromis_niloticus
ENSAMXG00000033455	-	60	35.646	ENSONIG00000021274	-	99	35.646	Oreochromis_niloticus
ENSAMXG00000033455	-	73	47.841	ENSORLG00020007796	-	59	48.009	Oryzias_latipes_hni
ENSAMXG00000033455	-	99	31.605	ENSOMEG00000021132	-	86	31.440	Oryzias_melastigma
ENSAMXG00000033455	-	60	34.379	ENSOMEG00000005516	-	80	34.375	Oryzias_melastigma
ENSAMXG00000033455	-	63	32.952	ENSOARG00000009849	-	80	32.316	Ovis_aries
ENSAMXG00000033455	-	63	33.206	ENSOARG00000014856	-	81	32.570	Ovis_aries
ENSAMXG00000033455	-	60	31.669	ENSOARG00000001648	-	99	31.012	Ovis_aries
ENSAMXG00000033455	-	51	35.771	ENSOARG00000015221	-	71	35.275	Ovis_aries
ENSAMXG00000033455	-	74	32.856	ENSPSIG00000001866	-	79	32.856	Pelodiscus_sinensis
ENSAMXG00000033455	-	73	33.591	ENSSSCG00000034853	-	76	33.591	Sus_scrofa
ENSAMXG00000033455	-	54	31.571	ENSSSCG00000034697	-	50	31.269	Sus_scrofa
ENSAMXG00000033455	-	98	34.721	ENSXMAG00000022532	-	84	34.721	Xiphophorus_maculatus
ENSAMXG00000033455	-	74	52.242	ENSXMAG00000024544	-	94	52.125	Xiphophorus_maculatus