EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033491 (Gene tree)
Gene ID: 103026653
Gene Symbol: rbpms
Alias: si:cabz01079824.1
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 26704 bases
Position: chrAPWO02000150.1:743266-769969
Accession: 103026653
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037877	RRM_1	PF00076.22	3.5e-11	1	1
ENSAMXP00000039446	RRM_1	PF00076.22	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000041166	-	2262	XM_022668614	ENSAMXP00000037877	191 (aa)	XP_022524335	UPI000BBDE8F6
ENSAMXT00000050545	-	591	-	ENSAMXP00000039446	196 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033491	rbpms	100	67.662	ENSAMXG00000037525	rbpms2b	100	69.652
ENSAMXG00000033491	rbpms	98	64.356	ENSAMXG00000036507	rbpms2a	99	67.822

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033491	rbpms	100	83.163	ENSG00000157110	RBPMS	100	83.163	Homo_sapiens
ENSAMXG00000033491	rbpms	99	93.229	ENSAPOG00000022304	RBPMS	99	93.229	Acanthochromis_polyacanthus
ENSAMXG00000033491	rbpms	81	87.179	ENSAMEG00000001522	RBPMS	71	87.179	Ailuropoda_melanoleuca
ENSAMXG00000033491	rbpms	63	93.388	ENSACIG00000011395	RBPMS	65	93.388	Amphilophus_citrinellus
ENSAMXG00000033491	rbpms	99	93.229	ENSAOCG00000007731	RBPMS	99	93.229	Amphiprion_ocellaris
ENSAMXG00000033491	rbpms	99	93.229	ENSAPEG00000023543	RBPMS	99	93.229	Amphiprion_percula
ENSAMXG00000033491	rbpms	99	92.188	ENSATEG00000018184	RBPMS	99	92.188	Anabas_testudineus
ENSAMXG00000033491	rbpms	100	82.143	ENSACAG00000003012	RBPMS	100	80.612	Anolis_carolinensis
ENSAMXG00000033491	rbpms	100	83.163	ENSANAG00000028150	RBPMS	100	83.163	Aotus_nancymaae
ENSAMXG00000033491	rbpms	99	92.708	ENSACLG00000002926	RBPMS	99	92.708	Astatotilapia_calliptera
ENSAMXG00000033491	rbpms	100	82.143	ENSBTAG00000033727	RBPMS	81	81.921	Bos_taurus
ENSAMXG00000033491	rbpms	100	83.163	ENSCJAG00000012366	RBPMS	100	83.163	Callithrix_jacchus
ENSAMXG00000033491	rbpms	91	83.051	ENSCAFG00000006503	RBPMS	81	83.051	Canis_familiaris
ENSAMXG00000033491	rbpms	91	83.051	ENSCAFG00020001031	RBPMS	81	83.051	Canis_lupus_dingo
ENSAMXG00000033491	rbpms	100	76.650	ENSCHIG00000027156	RBPMS	100	76.650	Capra_hircus
ENSAMXG00000033491	rbpms	58	88.182	ENSTSYG00000013982	RBPMS	83	88.182	Carlito_syrichta
ENSAMXG00000033491	rbpms	100	82.653	ENSCPOG00000038597	RBPMS	100	82.653	Cavia_porcellus
ENSAMXG00000033491	rbpms	100	83.163	ENSCCAG00000033226	RBPMS	100	83.163	Cebus_capucinus
ENSAMXG00000033491	rbpms	100	83.163	ENSCATG00000036486	RBPMS	100	83.163	Cercocebus_atys
ENSAMXG00000033491	rbpms	90	86.782	ENSCLAG00000001518	RBPMS	100	86.782	Chinchilla_lanigera
ENSAMXG00000033491	rbpms	91	83.051	ENSCSAG00000015838	RBPMS	81	83.051	Chlorocebus_sabaeus
ENSAMXG00000033491	rbpms	81	87.097	ENSCHOG00000008745	RBPMS	79	87.097	Choloepus_hoffmanni
ENSAMXG00000033491	rbpms	97	84.656	ENSCPBG00000013437	RBPMS	97	84.656	Chrysemys_picta_bellii
ENSAMXG00000033491	rbpms	90	86.782	ENSCANG00000034997	RBPMS	100	86.782	Colobus_angolensis_palliatus
ENSAMXG00000033491	rbpms	98	79.167	ENSCGRG00001002814	Rbpms	98	82.474	Cricetulus_griseus_chok1gshd
ENSAMXG00000033491	rbpms	90	81.714	ENSCGRG00000006095	Rbpms	100	86.286	Cricetulus_griseus_crigri
ENSAMXG00000033491	rbpms	100	93.299	ENSCSEG00000002777	rbpms	100	93.299	Cynoglossus_semilaevis
ENSAMXG00000033491	rbpms	99	93.229	ENSCVAG00000013975	RBPMS	99	93.229	Cyprinodon_variegatus
ENSAMXG00000033491	rbpms	87	70.414	ENSDARG00000099396	rbpms	100	70.414	Danio_rerio
ENSAMXG00000033491	rbpms	91	83.051	ENSDNOG00000008126	RBPMS	81	83.051	Dasypus_novemcinctus
ENSAMXG00000033491	rbpms	91	83.616	ENSETEG00000017582	RBPMS	81	83.616	Echinops_telfairi
ENSAMXG00000033491	rbpms	81	87.097	ENSEASG00005016962	RBPMS	78	87.097	Equus_asinus_asinus
ENSAMXG00000033491	rbpms	91	82.486	ENSECAG00000020735	RBPMS	78	87.097	Equus_caballus
ENSAMXG00000033491	rbpms	99	88.021	ENSELUG00000009787	rbpms	99	88.021	Esox_lucius
ENSAMXG00000033491	rbpms	100	82.653	ENSFCAG00000025639	-	100	82.653	Felis_catus
ENSAMXG00000033491	rbpms	88	52.353	ENSFCAG00000022292	-	80	51.176	Felis_catus
ENSAMXG00000033491	rbpms	90	86.782	ENSFDAG00000012078	RBPMS	100	86.782	Fukomys_damarensis
ENSAMXG00000033491	rbpms	99	92.708	ENSFHEG00000000618	rbpms	99	92.708	Fundulus_heteroclitus
ENSAMXG00000033491	rbpms	77	58.784	ENSGMOG00000009646	-	99	58.784	Gadus_morhua
ENSAMXG00000033491	rbpms	99	92.708	ENSGAFG00000016566	RBPMS	99	92.708	Gambusia_affinis
ENSAMXG00000033491	rbpms	99	81.250	ENSGACG00000019471	rbpms	99	81.250	Gasterosteus_aculeatus
ENSAMXG00000033491	rbpms	61	85.345	ENSGAGG00000023634	RBPMS	54	73.611	Gopherus_agassizii
ENSAMXG00000033491	rbpms	99	92.708	ENSHBUG00000005888	RBPMS	99	92.708	Haplochromis_burtoni
ENSAMXG00000033491	rbpms	100	83.163	ENSHGLG00000002303	RBPMS	100	83.163	Heterocephalus_glaber_female
ENSAMXG00000033491	rbpms	90	86.782	ENSHGLG00100008787	RBPMS	100	86.782	Heterocephalus_glaber_male
ENSAMXG00000033491	rbpms	99	92.670	ENSHCOG00000005774	rbpms	99	92.670	Hippocampus_comes
ENSAMXG00000033491	rbpms	100	91.667	ENSIPUG00000012459	RBPMS	100	91.667	Ictalurus_punctatus
ENSAMXG00000033491	rbpms	100	82.653	ENSSTOG00000026546	RBPMS	100	82.653	Ictidomys_tridecemlineatus
ENSAMXG00000033491	rbpms	100	83.163	ENSJJAG00000014024	Rbpms	100	83.163	Jaculus_jaculus
ENSAMXG00000033491	rbpms	90	75.723	ENSKMAG00000006377	RBPMS	88	76.705	Kryptolebias_marmoratus
ENSAMXG00000033491	rbpms	99	92.188	ENSLBEG00000027989	RBPMS	97	95.376	Labrus_bergylta
ENSAMXG00000033491	rbpms	90	90.286	ENSLOCG00000013199	RBPMS	96	90.286	Lepisosteus_oculatus
ENSAMXG00000033491	rbpms	91	83.051	ENSLAFG00000000209	RBPMS	81	83.051	Loxodonta_africana
ENSAMXG00000033491	rbpms	100	83.163	ENSMFAG00000036911	RBPMS	100	83.163	Macaca_fascicularis
ENSAMXG00000033491	rbpms	100	83.163	ENSMMUG00000000458	RBPMS	100	83.163	Macaca_mulatta
ENSAMXG00000033491	rbpms	100	83.163	ENSMNEG00000043805	RBPMS	100	83.163	Macaca_nemestrina
ENSAMXG00000033491	rbpms	90	86.782	ENSMLEG00000015635	RBPMS	100	86.782	Mandrillus_leucophaeus
ENSAMXG00000033491	rbpms	92	74.432	ENSMAMG00000004604	RBPMS	91	74.432	Mastacembelus_armatus
ENSAMXG00000033491	rbpms	99	92.708	ENSMZEG00005000698	RBPMS	98	94.886	Maylandia_zebra
ENSAMXG00000033491	rbpms	90	85.714	ENSMGAG00000005088	RBPMS	90	85.714	Meleagris_gallopavo
ENSAMXG00000033491	rbpms	98	79.167	ENSMAUG00000018892	Rbpms	98	82.474	Mesocricetus_auratus
ENSAMXG00000033491	rbpms	100	79.082	ENSMICG00000001295	RBPMS	100	82.653	Microcebus_murinus
ENSAMXG00000033491	rbpms	98	79.167	ENSMOCG00000014009	Rbpms	98	82.474	Microtus_ochrogaster
ENSAMXG00000033491	rbpms	85	92.025	ENSMMOG00000012036	RBPMS	74	86.441	Mola_mola
ENSAMXG00000033491	rbpms	97	84.127	ENSMODG00000019006	RBPMS	89	84.127	Monodelphis_domestica
ENSAMXG00000033491	rbpms	99	90.104	ENSMALG00000003261	RBPMS	99	90.104	Monopterus_albus
ENSAMXG00000033491	rbpms	98	78.646	MGP_CAROLIEiJ_G0030970	Rbpms	98	81.959	Mus_caroli
ENSAMXG00000033491	rbpms	98	78.646	ENSMUSG00000031586	Rbpms	98	81.959	Mus_musculus
ENSAMXG00000033491	rbpms	99	77.835	MGP_PahariEiJ_G0021439	Rbpms	98	81.959	Mus_pahari
ENSAMXG00000033491	rbpms	98	78.646	MGP_SPRETEiJ_G0032087	Rbpms	98	81.959	Mus_spretus
ENSAMXG00000033491	rbpms	81	87.179	ENSMPUG00000011314	RBPMS	71	87.179	Mustela_putorius_furo
ENSAMXG00000033491	rbpms	100	83.163	ENSMLUG00000009391	RBPMS	100	83.544	Myotis_lucifugus
ENSAMXG00000033491	rbpms	91	83.051	ENSNGAG00000011141	Rbpms	81	83.051	Nannospalax_galili
ENSAMXG00000033491	rbpms	93	92.737	ENSNBRG00000003313	RBPMS	98	94.886	Neolamprologus_brichardi
ENSAMXG00000033491	rbpms	100	83.163	ENSNLEG00000036183	-	100	83.163	Nomascus_leucogenys
ENSAMXG00000033491	rbpms	68	82.576	ENSOPRG00000013151	RBPMS	60	82.576	Ochotona_princeps
ENSAMXG00000033491	rbpms	100	83.163	ENSODEG00000006700	RBPMS	100	83.163	Octodon_degus
ENSAMXG00000033491	rbpms	90	95.402	ENSONIG00000007546	RBPMS	100	95.402	Oreochromis_niloticus
ENSAMXG00000033491	rbpms	91	83.051	ENSOCUG00000008572	RBPMS	81	83.051	Oryctolagus_cuniculus
ENSAMXG00000033491	rbpms	99	91.667	ENSORLG00000004135	-	99	91.667	Oryzias_latipes
ENSAMXG00000033491	rbpms	99	91.667	ENSORLG00020016179	RBPMS	99	91.667	Oryzias_latipes_hni
ENSAMXG00000033491	rbpms	99	91.667	ENSORLG00015013770	RBPMS	99	91.667	Oryzias_latipes_hsok
ENSAMXG00000033491	rbpms	99	91.667	ENSOMEG00000005044	RBPMS	99	91.667	Oryzias_melastigma
ENSAMXG00000033491	rbpms	93	81.768	ENSOGAG00000030298	RBPMS	81	81.768	Otolemur_garnettii
ENSAMXG00000033491	rbpms	59	88.393	ENSOARG00000010366	RBPMS	79	88.393	Ovis_aries
ENSAMXG00000033491	rbpms	90	86.782	ENSPPAG00000033108	RBPMS	100	86.782	Pan_paniscus
ENSAMXG00000033491	rbpms	100	82.653	ENSPPRG00000004836	RBPMS	100	82.653	Panthera_pardus
ENSAMXG00000033491	rbpms	90	86.782	ENSPTIG00000015964	RBPMS	89	86.782	Panthera_tigris_altaica
ENSAMXG00000033491	rbpms	100	83.163	ENSPTRG00000020135	RBPMS	100	83.163	Pan_troglodytes
ENSAMXG00000033491	rbpms	100	83.163	ENSPANG00000008143	RBPMS	100	83.163	Papio_anubis
ENSAMXG00000033491	rbpms	99	87.500	ENSPKIG00000000535	-	99	87.500	Paramormyrops_kingsleyae
ENSAMXG00000033491	rbpms	98	86.772	ENSPKIG00000004836	rbpms	100	86.772	Paramormyrops_kingsleyae
ENSAMXG00000033491	rbpms	90	86.782	ENSPSIG00000006136	RBPMS	99	86.782	Pelodiscus_sinensis
ENSAMXG00000033491	rbpms	89	90.000	ENSPMGG00000018012	RBPMS	79	90.000	Periophthalmus_magnuspinnatus
ENSAMXG00000033491	rbpms	99	78.462	ENSPEMG00000021130	Rbpms	98	82.051	Peromyscus_maniculatus_bairdii
ENSAMXG00000033491	rbpms	93	84.444	ENSPCIG00000019298	-	65	86.452	Phascolarctos_cinereus
ENSAMXG00000033491	rbpms	99	92.708	ENSPFOG00000017158	RBPMS	99	92.708	Poecilia_formosa
ENSAMXG00000033491	rbpms	99	92.708	ENSPLAG00000010767	RBPMS	99	92.708	Poecilia_latipinna
ENSAMXG00000033491	rbpms	99	92.708	ENSPMEG00000009788	RBPMS	99	92.708	Poecilia_mexicana
ENSAMXG00000033491	rbpms	99	92.708	ENSPREG00000016959	RBPMS	99	92.708	Poecilia_reticulata
ENSAMXG00000033491	rbpms	91	83.051	ENSPPYG00000018487	RBPMS	81	83.051	Pongo_abelii
ENSAMXG00000033491	rbpms	58	88.182	ENSPCAG00000013493	-	100	88.182	Procavia_capensis
ENSAMXG00000033491	rbpms	97	66.667	ENSPCOG00000015948	RBPMS	79	80.282	Propithecus_coquereli
ENSAMXG00000033491	rbpms	91	82.486	ENSPVAG00000001661	RBPMS	81	82.486	Pteropus_vampyrus
ENSAMXG00000033491	rbpms	99	92.708	ENSPNYG00000001172	RBPMS	98	94.886	Pundamilia_nyererei
ENSAMXG00000033491	rbpms	100	95.812	ENSPNAG00000029160	RBPMS	100	95.812	Pygocentrus_nattereri
ENSAMXG00000033491	rbpms	93	76.536	ENSRNOG00000013328	Rbpms	86	81.006	Rattus_norvegicus
ENSAMXG00000033491	rbpms	90	86.782	ENSRBIG00000038218	RBPMS	100	86.782	Rhinopithecus_bieti
ENSAMXG00000033491	rbpms	100	83.163	ENSRROG00000042518	RBPMS	100	83.163	Rhinopithecus_roxellana
ENSAMXG00000033491	rbpms	100	83.673	ENSSBOG00000026670	RBPMS	100	83.673	Saimiri_boliviensis_boliviensis
ENSAMXG00000033491	rbpms	90	86.857	ENSSHAG00000010114	RBPMS	90	86.857	Sarcophilus_harrisii
ENSAMXG00000033491	rbpms	98	86.772	ENSSFOG00015017481	-	100	86.772	Scleropages_formosus
ENSAMXG00000033491	rbpms	97	88.830	ENSSFOG00015000417	rbpms	97	88.830	Scleropages_formosus
ENSAMXG00000033491	rbpms	99	91.146	ENSSMAG00000010871	rbpms	99	91.146	Scophthalmus_maximus
ENSAMXG00000033491	rbpms	99	92.708	ENSSDUG00000010894	RBPMS	99	92.708	Seriola_dumerili
ENSAMXG00000033491	rbpms	99	92.708	ENSSLDG00000012916	RBPMS	99	92.708	Seriola_lalandi_dorsalis
ENSAMXG00000033491	rbpms	91	79.310	ENSSARG00000000274	RBPMS	79	79.310	Sorex_araneus
ENSAMXG00000033491	rbpms	91	85.227	ENSSPUG00000017525	RBPMS	67	85.227	Sphenodon_punctatus
ENSAMXG00000033491	rbpms	96	70.270	ENSSPAG00000004777	rbpms	80	93.182	Stegastes_partitus
ENSAMXG00000033491	rbpms	100	82.653	ENSSSCG00000015846	RBPMS	100	82.653	Sus_scrofa
ENSAMXG00000033491	rbpms	97	82.540	ENSTGUG00000001776	RBPMS	99	82.540	Taeniopygia_guttata
ENSAMXG00000033491	rbpms	99	91.146	ENSTRUG00000000041	RBPMS	99	91.146	Takifugu_rubripes
ENSAMXG00000033491	rbpms	91	82.386	ENSTTRG00000012451	RBPMS	81	82.386	Tursiops_truncatus
ENSAMXG00000033491	rbpms	61	84.483	ENSUAMG00000026353	RBPMS	76	84.483	Ursus_americanus
ENSAMXG00000033491	rbpms	85	85.276	ENSUMAG00000007347	RBPMS	76	86.538	Ursus_maritimus
ENSAMXG00000033491	rbpms	81	87.097	ENSVPAG00000010991	RBPMS	79	87.097	Vicugna_pacos
ENSAMXG00000033491	rbpms	100	83.163	ENSVVUG00000019770	RBPMS	100	83.163	Vulpes_vulpes
ENSAMXG00000033491	rbpms	90	86.782	ENSXETG00000011290	rbpms	100	86.782	Xenopus_tropicalis
ENSAMXG00000033491	rbpms	92	87.640	ENSXCOG00000002436	RBPMS	92	87.640	Xiphophorus_couchianus
ENSAMXG00000033491	rbpms	99	92.708	ENSXMAG00000027637	RBPMS	99	92.708	Xiphophorus_maculatus