EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033563 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 5284 bases
Position: chrAPWO02001552.1:5281-10564
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036228	HGTP_anticodon	PF03129.20	1.7e-05	1	1
ENSAMXP00000041476	HGTP_anticodon	PF03129.20	1.7e-05	1	1
ENSAMXP00000035282	HGTP_anticodon	PF03129.20	1.9e-05	1	1
ENSAMXP00000036228	tRNA-synt_2b	PF00587.25	9.2e-29	1	1
ENSAMXP00000041476	tRNA-synt_2b	PF00587.25	9.6e-29	1	1
ENSAMXP00000035282	tRNA-synt_2b	PF00587.25	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030913	-	1278	-	ENSAMXP00000041476	425 (aa)	-	-
ENSAMXT00000046376	-	1248	-	ENSAMXP00000036228	415 (aa)	-	-
ENSAMXT00000045682	-	1323	-	ENSAMXP00000035282	440 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033563	-	100	91.649	ENSAMXG00000032578	pars2	100	91.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033563	-	93	56.481	ENSG00000162396	PARS2	94	55.902	Homo_sapiens
ENSAMXG00000033563	-	100	64.803	ENSAPOG00000016537	pars2	100	64.803	Acanthochromis_polyacanthus
ENSAMXG00000033563	-	99	53.320	ENSAMEG00000019649	PARS2	97	53.320	Ailuropoda_melanoleuca
ENSAMXG00000033563	-	95	67.277	ENSACIG00000013596	pars2	98	64.043	Amphilophus_citrinellus
ENSAMXG00000033563	-	100	65.424	ENSAOCG00000023902	pars2	100	65.424	Amphiprion_ocellaris
ENSAMXG00000033563	-	100	62.979	ENSAPEG00000010009	pars2	100	62.979	Amphiprion_percula
ENSAMXG00000033563	-	95	68.421	ENSATEG00000019329	-	96	65.948	Anabas_testudineus
ENSAMXG00000033563	-	95	68.421	ENSATEG00000019166	pars2	96	65.948	Anabas_testudineus
ENSAMXG00000033563	-	97	56.473	ENSACAG00000000115	PARS2	95	56.473	Anolis_carolinensis
ENSAMXG00000033563	-	89	57.177	ENSANAG00000034319	PARS2	93	57.177	Aotus_nancymaae
ENSAMXG00000033563	-	96	67.120	ENSACLG00000009522	pars2	96	64.819	Astatotilapia_calliptera
ENSAMXG00000033563	-	98	54.604	ENSBTAG00000040313	PARS2	71	54.604	Bos_taurus
ENSAMXG00000033563	-	83	35.770	WBGene00004190	pars-2	81	35.770	Caenorhabditis_elegans
ENSAMXG00000033563	-	98	54.390	ENSCJAG00000015633	PARS2	97	54.390	Callithrix_jacchus
ENSAMXG00000033563	-	98	54.176	ENSCAFG00020012254	PARS2	97	54.176	Canis_lupus_dingo
ENSAMXG00000033563	-	99	54.797	ENSCHIG00000004850	PARS2	98	54.797	Capra_hircus
ENSAMXG00000033563	-	98	52.842	ENSCAPG00000007226	PARS2	97	52.842	Cavia_aperea
ENSAMXG00000033563	-	98	52.842	ENSCPOG00000025477	PARS2	97	52.842	Cavia_porcellus
ENSAMXG00000033563	-	100	53.782	ENSCLAG00000016176	PARS2	98	53.782	Chinchilla_lanigera
ENSAMXG00000033563	-	98	55.246	ENSCSAG00000000146	PARS2	97	55.246	Chlorocebus_sabaeus
ENSAMXG00000033563	-	92	60.190	ENSCPBG00000003691	PARS2	85	59.310	Chrysemys_picta_bellii
ENSAMXG00000033563	-	81	41.713	ENSCING00000000992	-	88	41.713	Ciona_intestinalis
ENSAMXG00000033563	-	81	40.385	ENSCSAVG00000004773	-	85	40.385	Ciona_savignyi
ENSAMXG00000033563	-	94	57.798	ENSCANG00000018730	PARS2	94	57.016	Colobus_angolensis_palliatus
ENSAMXG00000033563	-	94	57.569	ENSCGRG00001013821	Pars2	94	56.570	Cricetulus_griseus_chok1gshd
ENSAMXG00000033563	-	94	57.339	ENSCGRG00000012554	Pars2	94	56.347	Cricetulus_griseus_crigri
ENSAMXG00000033563	-	100	63.223	ENSCSEG00000017559	pars2	100	63.223	Cynoglossus_semilaevis
ENSAMXG00000033563	-	99	64.819	ENSCVAG00000011283	pars2	96	64.819	Cyprinodon_variegatus
ENSAMXG00000033563	-	100	71.162	ENSDARG00000044404	pars2	100	71.162	Danio_rerio
ENSAMXG00000033563	-	93	57.442	ENSDORG00000013567	Pars2	93	56.659	Dipodomys_ordii
ENSAMXG00000033563	-	86	40.769	FBgn0027082	ProRS-m	84	40.769	Drosophila_melanogaster
ENSAMXG00000033563	-	94	58.542	ENSETEG00000017674	PARS2	96	57.616	Echinops_telfairi
ENSAMXG00000033563	-	85	42.785	ENSEBUG00000012814	pars2	78	42.785	Eptatretus_burgeri
ENSAMXG00000033563	-	94	57.339	ENSEASG00005014595	PARS2	95	56.570	Equus_asinus_asinus
ENSAMXG00000033563	-	94	55.963	ENSFCAG00000022858	PARS2	90	55.963	Felis_catus
ENSAMXG00000033563	-	89	59.169	ENSFALG00000012136	PARS2	85	56.027	Ficedula_albicollis
ENSAMXG00000033563	-	98	54.957	ENSFDAG00000013750	PARS2	98	54.915	Fukomys_damarensis
ENSAMXG00000033563	-	99	64.530	ENSFHEG00000011032	pars2	96	64.530	Fundulus_heteroclitus
ENSAMXG00000033563	-	69	68.750	ENSGMOG00000015469	pars2	76	68.027	Gadus_morhua
ENSAMXG00000033563	-	94	59.122	ENSGALG00000010789	PARS2	72	59.122	Gallus_gallus
ENSAMXG00000033563	-	95	67.735	ENSGACG00000007240	pars2	96	65.236	Gasterosteus_aculeatus
ENSAMXG00000033563	-	89	58.473	ENSGAGG00000014148	PARS2	98	58.473	Gopherus_agassizii
ENSAMXG00000033563	-	93	56.481	ENSGGOG00000005426	PARS2	94	55.902	Gorilla_gorilla
ENSAMXG00000033563	-	96	67.120	ENSHBUG00000013678	pars2	96	65.032	Haplochromis_burtoni
ENSAMXG00000033563	-	100	53.571	ENSHGLG00000003221	PARS2	100	53.571	Heterocephalus_glaber_female
ENSAMXG00000033563	-	100	53.571	ENSHGLG00100002370	PARS2	100	53.571	Heterocephalus_glaber_male
ENSAMXG00000033563	-	100	62.190	ENSHCOG00000006282	pars2	100	62.190	Hippocampus_comes
ENSAMXG00000033563	-	100	75.000	ENSIPUG00000007836	pars2	100	75.000	Ictalurus_punctatus
ENSAMXG00000033563	-	98	54.957	ENSSTOG00000012213	PARS2	98	54.487	Ictidomys_tridecemlineatus
ENSAMXG00000033563	-	100	64.182	ENSKMAG00000012222	pars2	100	64.182	Kryptolebias_marmoratus
ENSAMXG00000033563	-	97	64.126	ENSLBEG00000005842	pars2	98	63.576	Labrus_bergylta
ENSAMXG00000033563	-	81	68.883	ENSLBEG00000006420	-	96	68.883	Labrus_bergylta
ENSAMXG00000033563	-	94	60.321	ENSLACG00000004845	PARS2	92	60.321	Latimeria_chalumnae
ENSAMXG00000033563	-	100	57.201	ENSLOCG00000008678	pars2	100	57.201	Lepisosteus_oculatus
ENSAMXG00000033563	-	98	55.724	ENSLAFG00000008727	PARS2	95	55.724	Loxodonta_africana
ENSAMXG00000033563	-	94	57.339	ENSMMUG00000032084	PARS2	95	56.667	Macaca_mulatta
ENSAMXG00000033563	-	94	57.339	ENSMLEG00000027947	PARS2	95	56.667	Mandrillus_leucophaeus
ENSAMXG00000033563	-	95	69.053	ENSMAMG00000008843	pars2	99	65.053	Mastacembelus_armatus
ENSAMXG00000033563	-	96	67.120	ENSMZEG00005018397	pars2	96	64.819	Maylandia_zebra
ENSAMXG00000033563	-	94	58.199	ENSMGAG00000011416	PARS2	92	58.430	Meleagris_gallopavo
ENSAMXG00000033563	-	95	56.492	ENSMAUG00000022043	Pars2	94	54.565	Mesocricetus_auratus
ENSAMXG00000033563	-	93	59.122	ENSMOCG00000018351	Pars2	91	59.122	Microtus_ochrogaster
ENSAMXG00000033563	-	95	68.721	ENSMMOG00000006550	pars2	100	64.375	Mola_mola
ENSAMXG00000033563	-	97	55.414	ENSMODG00000025123	PARS2	97	55.414	Monodelphis_domestica
ENSAMXG00000033563	-	100	62.500	ENSMALG00000018954	pars2	100	62.500	Monopterus_albus
ENSAMXG00000033563	-	99	55.032	MGP_CAROLIEiJ_G0026236	Pars2	95	55.032	Mus_caroli
ENSAMXG00000033563	-	99	55.675	ENSMUSG00000043572	Pars2	95	55.675	Mus_musculus
ENSAMXG00000033563	-	99	55.032	MGP_PahariEiJ_G0028570	Pars2	95	55.032	Mus_pahari
ENSAMXG00000033563	-	94	57.569	MGP_SPRETEiJ_G0027205	Pars2	92	57.569	Mus_spretus
ENSAMXG00000033563	-	94	56.651	ENSMPUG00000020180	PARS2	92	56.651	Mustela_putorius_furo
ENSAMXG00000033563	-	98	53.961	ENSMLUG00000016899	PARS2	90	53.961	Myotis_lucifugus
ENSAMXG00000033563	-	98	54.176	ENSNGAG00000015140	Pars2	97	54.176	Nannospalax_galili
ENSAMXG00000033563	-	96	67.347	ENSNBRG00000020304	pars2	96	65.032	Neolamprologus_brichardi
ENSAMXG00000033563	-	98	53.961	ENSNLEG00000003040	PARS2	97	54.604	Nomascus_leucogenys
ENSAMXG00000033563	-	94	55.963	ENSOPRG00000016102	PARS2	94	55.234	Ochotona_princeps
ENSAMXG00000033563	-	99	53.895	ENSODEG00000020020	PARS2	99	53.895	Octodon_degus
ENSAMXG00000033563	-	95	67.735	ENSONIG00000009984	pars2	98	64.482	Oreochromis_niloticus
ENSAMXG00000033563	-	95	52.448	ENSOANG00000007752	PARS2	93	52.706	Ornithorhynchus_anatinus
ENSAMXG00000033563	-	94	56.881	ENSOCUG00000001045	PARS2	76	56.347	Oryctolagus_cuniculus
ENSAMXG00000033563	-	95	66.590	ENSORLG00000025001	pars2	99	64.706	Oryzias_latipes
ENSAMXG00000033563	-	95	66.590	ENSORLG00020011316	pars2	98	63.291	Oryzias_latipes_hni
ENSAMXG00000033563	-	95	66.362	ENSORLG00015007461	pars2	97	66.210	Oryzias_latipes_hsok
ENSAMXG00000033563	-	98	63.502	ENSOMEG00000007136	pars2	98	63.502	Oryzias_melastigma
ENSAMXG00000033563	-	94	57.110	ENSOGAG00000031493	PARS2	94	56.347	Otolemur_garnettii
ENSAMXG00000033563	-	98	55.460	ENSOARG00000009941	PARS2	95	55.460	Ovis_aries
ENSAMXG00000033563	-	98	54.176	ENSPPAG00000001589	PARS2	93	54.818	Pan_paniscus
ENSAMXG00000033563	-	98	53.961	ENSPPRG00000020447	PARS2	97	53.961	Panthera_pardus
ENSAMXG00000033563	-	94	55.505	ENSPTIG00000004031	PARS2	92	55.505	Panthera_tigris_altaica
ENSAMXG00000033563	-	98	54.176	ENSPTRG00000000776	PARS2	97	54.818	Pan_troglodytes
ENSAMXG00000033563	-	100	63.223	ENSPKIG00000001336	pars2	92	63.223	Paramormyrops_kingsleyae
ENSAMXG00000033563	-	97	63.871	ENSPMGG00000021953	pars2	99	63.871	Periophthalmus_magnuspinnatus
ENSAMXG00000033563	-	94	58.161	ENSPEMG00000004864	Pars2	94	55.870	Peromyscus_maniculatus_bairdii
ENSAMXG00000033563	-	91	52.632	ENSPMAG00000009138	pars2	99	52.632	Petromyzon_marinus
ENSAMXG00000033563	-	94	56.651	ENSPCIG00000018193	PARS2	92	56.651	Phascolarctos_cinereus
ENSAMXG00000033563	-	95	68.192	ENSPFOG00000010522	pars2	95	66.231	Poecilia_formosa
ENSAMXG00000033563	-	95	68.421	ENSPLAG00000022589	pars2	92	66.449	Poecilia_latipinna
ENSAMXG00000033563	-	95	68.192	ENSPMEG00000007151	pars2	92	66.231	Poecilia_mexicana
ENSAMXG00000033563	-	95	67.963	ENSPREG00000009788	pars2	95	66.013	Poecilia_reticulata
ENSAMXG00000033563	-	50	62.115	ENSPPYG00000001311	-	90	60.417	Pongo_abelii
ENSAMXG00000033563	-	67	58.278	ENSPCAG00000012707	PARS2	100	58.278	Procavia_capensis
ENSAMXG00000033563	-	96	67.120	ENSPNYG00000012698	pars2	96	65.032	Pundamilia_nyererei
ENSAMXG00000033563	-	100	79.749	ENSPNAG00000003869	pars2	100	79.749	Pygocentrus_nattereri
ENSAMXG00000033563	-	94	58.257	ENSRNOG00000007327	Pars2	95	57.111	Rattus_norvegicus
ENSAMXG00000033563	-	94	57.798	ENSRBIG00000030034	PARS2	94	57.111	Rhinopithecus_bieti
ENSAMXG00000033563	-	98	55.675	ENSRROG00000000487	PARS2	97	55.675	Rhinopithecus_roxellana
ENSAMXG00000033563	-	85	35.878	YER087W	-	60	36.929	Saccharomyces_cerevisiae
ENSAMXG00000033563	-	95	57.301	ENSSHAG00000004206	PARS2	96	56.645	Sarcophilus_harrisii
ENSAMXG00000033563	-	100	62.322	ENSSFOG00015000170	pars2	99	62.322	Scleropages_formosus
ENSAMXG00000033563	-	95	66.362	ENSSMAG00000020710	pars2	92	62.917	Scophthalmus_maximus
ENSAMXG00000033563	-	98	66.815	ENSSDUG00000012630	pars2	100	66.815	Seriola_dumerili
ENSAMXG00000033563	-	63	64.171	ENSSLDG00000003353	pars2	67	64.171	Seriola_lalandi_dorsalis
ENSAMXG00000033563	-	50	53.419	ENSSARG00000006071	-	97	53.419	Sorex_araneus
ENSAMXG00000033563	-	98	55.274	ENSSPUG00000014688	PARS2	99	55.864	Sphenodon_punctatus
ENSAMXG00000033563	-	100	62.940	ENSSPAG00000023092	pars2	100	62.940	Stegastes_partitus
ENSAMXG00000033563	-	90	59.091	ENSSSCG00000003843	PARS2	91	59.091	Sus_scrofa
ENSAMXG00000033563	-	94	57.471	ENSTGUG00000009489	PARS2	98	57.471	Taeniopygia_guttata
ENSAMXG00000033563	-	95	68.879	ENSTRUG00000018560	pars2	95	66.957	Takifugu_rubripes
ENSAMXG00000033563	-	97	66.374	ENSTNIG00000018113	pars2	95	66.087	Tetraodon_nigroviridis
ENSAMXG00000033563	-	83	53.521	ENSTTRG00000000716	PARS2	79	53.521	Tursiops_truncatus
ENSAMXG00000033563	-	99	53.527	ENSUAMG00000003814	-	93	53.527	Ursus_americanus
ENSAMXG00000033563	-	99	53.527	ENSUAMG00000010990	-	93	53.527	Ursus_americanus
ENSAMXG00000033563	-	98	50.837	ENSUMAG00000022250	PARS2	92	50.837	Ursus_maritimus
ENSAMXG00000033563	-	94	55.357	ENSVVUG00000026785	PARS2	93	55.357	Vulpes_vulpes
ENSAMXG00000033563	-	95	67.277	ENSXCOG00000008574	pars2	97	65.502	Xiphophorus_couchianus
ENSAMXG00000033563	-	95	67.506	ENSXMAG00000002269	pars2	95	65.795	Xiphophorus_maculatus