EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033587 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2475 bases
Position: chrAPWO02001711.1:17851-20325
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030464	RVT_1	PF00078.27	3.7e-54	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033794	-	2475	-	ENSAMXP00000030464	824 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033587's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033587's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033587	-	80	35.127	ENSAMXG00000041150	-	61	35.508
ENSAMXG00000033587	-	98	34.386	ENSAMXG00000036752	-	99	34.386
ENSAMXG00000033587	-	96	34.597	ENSAMXG00000036146	-	63	34.597
ENSAMXG00000033587	-	99	47.694	ENSAMXG00000031230	-	65	47.694
ENSAMXG00000033587	-	70	35.324	ENSAMXG00000036080	-	51	35.324
ENSAMXG00000033587	-	99	31.242	ENSAMXG00000037256	-	65	31.242
ENSAMXG00000033587	-	99	33.612	ENSAMXG00000042761	-	65	33.612
ENSAMXG00000033587	-	99	51.217	ENSAMXG00000034221	-	65	51.217
ENSAMXG00000033587	-	98	47.613	ENSAMXG00000037218	-	81	47.613

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033587	-	99	32.485	ENSAOCG00000008973	-	57	32.485	Amphiprion_ocellaris
ENSAMXG00000033587	-	99	39.405	ENSAPEG00000012642	-	66	39.405	Amphiprion_percula
ENSAMXG00000033587	-	82	32.893	ENSACLG00000018177	-	60	32.893	Astatotilapia_calliptera
ENSAMXG00000033587	-	99	43.803	ENSACLG00000012298	-	65	43.803	Astatotilapia_calliptera
ENSAMXG00000033587	-	99	32.185	ENSACLG00000014673	-	65	32.572	Astatotilapia_calliptera
ENSAMXG00000033587	-	99	47.821	ENSACLG00000027045	-	99	47.821	Astatotilapia_calliptera
ENSAMXG00000033587	-	77	50.390	ENSACLG00000026023	-	60	50.390	Astatotilapia_calliptera
ENSAMXG00000033587	-	99	49.695	ENSACLG00000023850	-	65	49.695	Astatotilapia_calliptera
ENSAMXG00000033587	-	99	32.614	ENSACLG00000002748	-	69	32.614	Astatotilapia_calliptera
ENSAMXG00000033587	-	99	31.108	ENSKMAG00000007098	-	64	31.333	Kryptolebias_marmoratus
ENSAMXG00000033587	-	99	42.509	ENSKMAG00000018279	-	65	42.509	Kryptolebias_marmoratus
ENSAMXG00000033587	-	95	32.278	ENSKMAG00000002601	-	63	32.278	Kryptolebias_marmoratus
ENSAMXG00000033587	-	99	46.051	ENSKMAG00000014428	-	65	46.051	Kryptolebias_marmoratus
ENSAMXG00000033587	-	99	38.509	ENSKMAG00000006598	-	70	38.509	Kryptolebias_marmoratus
ENSAMXG00000033587	-	99	58.730	ENSKMAG00000020345	-	65	58.730	Kryptolebias_marmoratus
ENSAMXG00000033587	-	99	31.863	ENSKMAG00000006893	-	82	31.863	Kryptolebias_marmoratus
ENSAMXG00000033587	-	99	31.227	ENSKMAG00000013004	-	64	31.227	Kryptolebias_marmoratus
ENSAMXG00000033587	-	94	32.010	ENSLBEG00000017877	-	97	32.010	Labrus_bergylta
ENSAMXG00000033587	-	90	34.166	ENSMZEG00005013632	-	99	34.519	Maylandia_zebra
ENSAMXG00000033587	-	99	47.683	ENSMZEG00005001544	-	81	47.683	Maylandia_zebra
ENSAMXG00000033587	-	81	47.164	ENSONIG00000020880	-	99	47.164	Oreochromis_niloticus
ENSAMXG00000033587	-	99	47.995	ENSONIG00000020778	-	90	47.995	Oreochromis_niloticus
ENSAMXG00000033587	-	98	31.656	ENSORLG00000025420	-	64	31.656	Oryzias_latipes
ENSAMXG00000033587	-	99	44.727	ENSORLG00000029419	-	65	44.727	Oryzias_latipes
ENSAMXG00000033587	-	99	45.576	ENSORLG00000024310	-	65	45.576	Oryzias_latipes
ENSAMXG00000033587	-	98	31.656	ENSORLG00000026691	-	64	31.656	Oryzias_latipes
ENSAMXG00000033587	-	94	33.883	ENSORLG00000023193	-	92	33.883	Oryzias_latipes
ENSAMXG00000033587	-	98	31.411	ENSORLG00000029798	-	64	31.411	Oryzias_latipes
ENSAMXG00000033587	-	92	44.954	ENSORLG00020003581	-	94	44.954	Oryzias_latipes_hni
ENSAMXG00000033587	-	99	31.250	ENSORLG00020001169	-	63	31.250	Oryzias_latipes_hni
ENSAMXG00000033587	-	99	33.974	ENSORLG00020008142	-	64	34.132	Oryzias_latipes_hni
ENSAMXG00000033587	-	99	46.909	ENSORLG00020016539	-	92	46.909	Oryzias_latipes_hni
ENSAMXG00000033587	-	99	46.788	ENSORLG00020000561	-	65	46.788	Oryzias_latipes_hni
ENSAMXG00000033587	-	98	31.411	ENSORLG00020020951	-	64	31.411	Oryzias_latipes_hni
ENSAMXG00000033587	-	99	32.807	ENSORLG00015002129	-	64	32.807	Oryzias_latipes_hsok
ENSAMXG00000033587	-	99	46.667	ENSORLG00015013713	-	65	46.667	Oryzias_latipes_hsok
ENSAMXG00000033587	-	97	46.491	ENSORLG00015002592	-	63	46.107	Oryzias_latipes_hsok
ENSAMXG00000033587	-	99	32.688	ENSOMEG00000021560	-	80	32.688	Oryzias_melastigma
ENSAMXG00000033587	-	95	59.241	ENSOMEG00000006131	-	99	59.241	Oryzias_melastigma
ENSAMXG00000033587	-	97	49.628	ENSPREG00000005522	-	65	49.628	Poecilia_reticulata
ENSAMXG00000033587	-	99	38.158	ENSPREG00000018911	-	64	38.158	Poecilia_reticulata
ENSAMXG00000033587	-	89	33.515	ENSSLDG00000010601	-	70	33.422	Seriola_lalandi_dorsalis
ENSAMXG00000033587	-	99	37.430	ENSXETG00000034016	-	82	37.430	Xenopus_tropicalis
ENSAMXG00000033587	-	99	32.413	ENSXMAG00000023805	-	98	32.091	Xiphophorus_maculatus
ENSAMXG00000033587	-	99	42.509	ENSXMAG00000021762	-	94	42.509	Xiphophorus_maculatus
ENSAMXG00000033587	-	99	48.783	ENSXMAG00000028274	-	68	48.783	Xiphophorus_maculatus
ENSAMXG00000033587	-	99	42.509	ENSXMAG00000024492	-	96	42.509	Xiphophorus_maculatus
ENSAMXG00000033587	-	95	30.292	ENSXMAG00000027558	-	63	30.895	Xiphophorus_maculatus
ENSAMXG00000033587	-	99	32.321	ENSXMAG00000027070	-	64	32.321	Xiphophorus_maculatus