EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033665 (Gene tree)
Gene ID: 103042983
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain zinc finger protein 12-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5775 bases
Position: chrAPWO02000027.1:2538797-2544571
Accession: 103042983
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029693	zf-C2H2	PF00096.26	2.4e-10	1	2
ENSAMXP00000029693	zf-C2H2	PF00096.26	2.4e-10	2	2
ENSAMXP00000029693	zf-met	PF12874.7	8.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033125	-	2841	XM_007243863	ENSAMXP00000029693	370 (aa)	XP_007243925	UPI000440E5E6

Gene Model

Click here to download ENSAMXG00000033665's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033665's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033665	prdm12b	100	82.432	ENSAMXG00000008540	PRDM12	100	82.432

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033665	prdm12b	90	88.024	ENSG00000130711	PRDM12	99	81.720	Homo_sapiens
ENSAMXG00000033665	prdm12b	100	66.138	ENSAPOG00000018234	-	100	65.873	Acanthochromis_polyacanthus
ENSAMXG00000033665	prdm12b	100	82.597	ENSAPOG00000016051	prdm12b	100	82.338	Acanthochromis_polyacanthus
ENSAMXG00000033665	prdm12b	89	85.714	ENSAMEG00000016234	PRDM12	99	85.410	Ailuropoda_melanoleuca
ENSAMXG00000033665	prdm12b	100	82.152	ENSACIG00000019578	prdm12b	100	82.152	Amphilophus_citrinellus
ENSAMXG00000033665	prdm12b	100	79.793	ENSACIG00000005193	-	100	76.650	Amphilophus_citrinellus
ENSAMXG00000033665	prdm12b	100	82.940	ENSAOCG00000015040	prdm12b	100	82.677	Amphiprion_ocellaris
ENSAMXG00000033665	prdm12b	100	76.804	ENSAPEG00000022849	-	99	77.320	Amphiprion_percula
ENSAMXG00000033665	prdm12b	100	83.862	ENSAPEG00000015092	prdm12b	100	84.000	Amphiprion_percula
ENSAMXG00000033665	prdm12b	100	81.818	ENSATEG00000014595	-	100	81.299	Anabas_testudineus
ENSAMXG00000033665	prdm12b	94	85.960	ENSANAG00000020616	PRDM12	96	87.725	Aotus_nancymaae
ENSAMXG00000033665	prdm12b	100	82.796	ENSACLG00000011876	prdm12b	100	82.527	Astatotilapia_calliptera
ENSAMXG00000033665	prdm12b	100	78.934	ENSACLG00000007631	-	100	79.188	Astatotilapia_calliptera
ENSAMXG00000033665	prdm12b	90	88.323	ENSBTAG00000023797	PRDM12	99	82.973	Bos_taurus
ENSAMXG00000033665	prdm12b	90	88.024	ENSCJAG00000020540	PRDM12	99	82.162	Callithrix_jacchus
ENSAMXG00000033665	prdm12b	79	89.384	ENSCAFG00000023076	PRDM12	99	82.622	Canis_familiaris
ENSAMXG00000033665	prdm12b	90	88.623	ENSCAFG00020024046	PRDM12	99	82.703	Canis_lupus_dingo
ENSAMXG00000033665	prdm12b	90	88.623	ENSCHIG00000025005	PRDM12	99	82.973	Capra_hircus
ENSAMXG00000033665	prdm12b	86	88.050	ENSCPOG00000005901	PRDM12	95	88.050	Cavia_porcellus
ENSAMXG00000033665	prdm12b	90	88.024	ENSCCAG00000037485	PRDM12	99	82.432	Cebus_capucinus
ENSAMXG00000033665	prdm12b	90	88.024	ENSCATG00000020327	PRDM12	99	82.432	Cercocebus_atys
ENSAMXG00000033665	prdm12b	90	88.024	ENSCLAG00000005499	PRDM12	90	88.024	Chinchilla_lanigera
ENSAMXG00000033665	prdm12b	90	88.024	ENSCSAG00000014756	PRDM12	99	82.162	Chlorocebus_sabaeus
ENSAMXG00000033665	prdm12b	100	85.135	ENSCPBG00000022628	PRDM12	99	83.243	Chrysemys_picta_bellii
ENSAMXG00000033665	prdm12b	90	88.323	ENSCGRG00001015005	Prdm12	99	82.749	Cricetulus_griseus_chok1gshd
ENSAMXG00000033665	prdm12b	100	81.818	ENSCVAG00000017166	prdm12b	100	82.086	Cyprinodon_variegatus
ENSAMXG00000033665	prdm12b	100	80.000	ENSCVAG00000000944	-	100	80.000	Cyprinodon_variegatus
ENSAMXG00000033665	prdm12b	100	92.432	ENSDARG00000007430	prdm12b	100	91.081	Danio_rerio
ENSAMXG00000033665	prdm12b	90	87.761	ENSDNOG00000042302	PRDM12	99	83.019	Dasypus_novemcinctus
ENSAMXG00000033665	prdm12b	90	64.407	ENSEBUG00000016780	prdm12b	77	66.571	Eptatretus_burgeri
ENSAMXG00000033665	prdm12b	94	86.533	ENSEASG00005008472	PRDM12	99	82.432	Equus_asinus_asinus
ENSAMXG00000033665	prdm12b	94	86.533	ENSECAG00000005933	PRDM12	99	82.432	Equus_caballus
ENSAMXG00000033665	prdm12b	100	80.593	ENSELUG00000013674	PRDM12	100	79.737	Esox_lucius
ENSAMXG00000033665	prdm12b	100	86.828	ENSELUG00000009905	prdm12b	100	86.290	Esox_lucius
ENSAMXG00000033665	prdm12b	90	88.623	ENSFCAG00000043086	PRDM12	99	82.973	Felis_catus
ENSAMXG00000033665	prdm12b	100	85.676	ENSFALG00000001445	PRDM12	89	83.784	Ficedula_albicollis
ENSAMXG00000033665	prdm12b	100	81.432	ENSFHEG00000003944	prdm12b	100	81.698	Fundulus_heteroclitus
ENSAMXG00000033665	prdm12b	100	79.592	ENSFHEG00000007746	-	100	79.847	Fundulus_heteroclitus
ENSAMXG00000033665	prdm12b	100	83.110	ENSGMOG00000011797	prdm12b	100	80.739	Gadus_morhua
ENSAMXG00000033665	prdm12b	100	85.676	ENSGALG00000003895	PRDM12	99	83.784	Gallus_gallus
ENSAMXG00000033665	prdm12b	100	81.698	ENSGAFG00000010827	prdm12b	99	82.181	Gambusia_affinis
ENSAMXG00000033665	prdm12b	100	82.933	ENSGACG00000016713	prdm12b	99	82.038	Gasterosteus_aculeatus
ENSAMXG00000033665	prdm12b	100	85.405	ENSGAGG00000014083	PRDM12	99	83.514	Gopherus_agassizii
ENSAMXG00000033665	prdm12b	90	87.725	ENSGGOG00000010568	PRDM12	99	81.941	Gorilla_gorilla
ENSAMXG00000033665	prdm12b	100	78.934	ENSHBUG00000022537	-	93	79.188	Haplochromis_burtoni
ENSAMXG00000033665	prdm12b	100	82.586	ENSHBUG00000022878	prdm12b	100	82.322	Haplochromis_burtoni
ENSAMXG00000033665	prdm12b	90	87.725	ENSHGLG00000013939	PRDM12	99	81.892	Heterocephalus_glaber_female
ENSAMXG00000033665	prdm12b	100	73.087	ENSHCOG00000021167	-	100	72.296	Hippocampus_comes
ENSAMXG00000033665	prdm12b	89	82.749	ENSHCOG00000003663	prdm12b	100	75.510	Hippocampus_comes
ENSAMXG00000033665	prdm12b	100	78.649	ENSIPUG00000019544	PRDM12	100	78.649	Ictalurus_punctatus
ENSAMXG00000033665	prdm12b	100	92.973	ENSIPUG00000017053	prdm12b	100	92.432	Ictalurus_punctatus
ENSAMXG00000033665	prdm12b	95	86.286	ENSSTOG00000005986	PRDM12	86	88.323	Ictidomys_tridecemlineatus
ENSAMXG00000033665	prdm12b	90	89.189	ENSJJAG00000005424	Prdm12	99	88.623	Jaculus_jaculus
ENSAMXG00000033665	prdm12b	99	78.552	ENSKMAG00000021205	-	99	77.480	Kryptolebias_marmoratus
ENSAMXG00000033665	prdm12b	100	75.743	ENSKMAG00000016921	prdm12b	100	75.743	Kryptolebias_marmoratus
ENSAMXG00000033665	prdm12b	100	83.598	ENSLBEG00000017769	prdm12b	100	82.275	Labrus_bergylta
ENSAMXG00000033665	prdm12b	100	79.474	ENSLBEG00000007776	-	100	79.737	Labrus_bergylta
ENSAMXG00000033665	prdm12b	100	85.405	ENSLACG00000017560	PRDM12	99	84.324	Latimeria_chalumnae
ENSAMXG00000033665	prdm12b	100	87.027	ENSLOCG00000005429	prdm12b	99	87.027	Lepisosteus_oculatus
ENSAMXG00000033665	prdm12b	90	87.059	ENSLAFG00000006979	PRDM12	90	86.726	Loxodonta_africana
ENSAMXG00000033665	prdm12b	90	88.024	ENSMFAG00000040322	PRDM12	89	87.725	Macaca_fascicularis
ENSAMXG00000033665	prdm12b	90	88.024	ENSMNEG00000037234	PRDM12	99	82.432	Macaca_nemestrina
ENSAMXG00000033665	prdm12b	100	83.641	ENSMAMG00000013212	prdm12b	100	82.759	Mastacembelus_armatus
ENSAMXG00000033665	prdm12b	100	77.157	ENSMAMG00000018988	-	100	78.426	Mastacembelus_armatus
ENSAMXG00000033665	prdm12b	100	78.535	ENSMZEG00005000415	PRDM12	100	78.788	Maylandia_zebra
ENSAMXG00000033665	prdm12b	98	85.440	ENSMGAG00000005438	PRDM12	98	83.516	Meleagris_gallopavo
ENSAMXG00000033665	prdm12b	100	82.888	ENSMAUG00000013040	Prdm12	99	82.432	Mesocricetus_auratus
ENSAMXG00000033665	prdm12b	94	86.744	ENSMICG00000015480	PRDM12	91	88.323	Microcebus_murinus
ENSAMXG00000033665	prdm12b	96	84.916	ENSMOCG00000021026	Prdm12	90	88.623	Microtus_ochrogaster
ENSAMXG00000033665	prdm12b	100	85.445	ENSMODG00000012108	PRDM12	99	83.558	Monodelphis_domestica
ENSAMXG00000033665	prdm12b	86	79.257	ENSMALG00000021901	prdm12b	99	71.046	Monopterus_albus
ENSAMXG00000033665	prdm12b	90	88.323	MGP_CAROLIEiJ_G0023414	Prdm12	99	82.973	Mus_caroli
ENSAMXG00000033665	prdm12b	90	88.323	ENSMUSG00000079466	Prdm12	99	82.973	Mus_musculus
ENSAMXG00000033665	prdm12b	90	88.323	MGP_PahariEiJ_G0024871	Prdm12	99	82.973	Mus_pahari
ENSAMXG00000033665	prdm12b	90	88.323	MGP_SPRETEiJ_G0024331	Prdm12	99	82.973	Mus_spretus
ENSAMXG00000033665	prdm12b	90	88.554	ENSNGAG00000018480	Prdm12	99	81.081	Nannospalax_galili
ENSAMXG00000033665	prdm12b	100	81.937	ENSNBRG00000006727	prdm12b	100	81.937	Neolamprologus_brichardi
ENSAMXG00000033665	prdm12b	100	73.947	ENSNBRG00000024312	-	100	73.684	Neolamprologus_brichardi
ENSAMXG00000033665	prdm12b	100	76.550	ENSMEUG00000003828	PRDM12	99	74.663	Notamacropus_eugenii
ENSAMXG00000033665	prdm12b	90	87.725	ENSOPRG00000008680	PRDM12	99	87.425	Ochotona_princeps
ENSAMXG00000033665	prdm12b	94	86.246	ENSODEG00000016282	PRDM12	62	88.323	Octodon_degus
ENSAMXG00000033665	prdm12b	63	83.333	ENSOANG00000001043	PRDM12	100	81.197	Ornithorhynchus_anatinus
ENSAMXG00000033665	prdm12b	84	85.852	ENSOCUG00000008241	PRDM12	98	85.531	Oryctolagus_cuniculus
ENSAMXG00000033665	prdm12b	100	80.052	ENSORLG00000007114	prdm12b	99	79.790	Oryzias_latipes
ENSAMXG00000033665	prdm12b	100	78.718	ENSORLG00000017558	-	100	79.487	Oryzias_latipes
ENSAMXG00000033665	prdm12b	100	78.517	ENSORLG00020013167	-	100	79.284	Oryzias_latipes_hni
ENSAMXG00000033665	prdm12b	100	80.840	ENSORLG00020019565	prdm12b	99	80.840	Oryzias_latipes_hni
ENSAMXG00000033665	prdm12b	100	79.790	ENSORLG00015007621	prdm12b	99	79.528	Oryzias_latipes_hsok
ENSAMXG00000033665	prdm12b	100	78.718	ENSORLG00015003435	-	100	79.487	Oryzias_latipes_hsok
ENSAMXG00000033665	prdm12b	100	77.778	ENSOMEG00000007762	-	100	78.788	Oryzias_melastigma
ENSAMXG00000033665	prdm12b	100	81.510	ENSOMEG00000004134	prdm12b	99	81.510	Oryzias_melastigma
ENSAMXG00000033665	prdm12b	90	88.623	ENSOGAG00000007557	PRDM12	98	88.323	Otolemur_garnettii
ENSAMXG00000033665	prdm12b	79	86.644	ENSPPAG00000031506	-	99	84.899	Pan_paniscus
ENSAMXG00000033665	prdm12b	100	75.733	ENSPPRG00000023024	PRDM12	84	80.597	Panthera_pardus
ENSAMXG00000033665	prdm12b	90	88.024	ENSPTRG00000021475	PRDM12	99	82.210	Pan_troglodytes
ENSAMXG00000033665	prdm12b	90	88.024	ENSPTRG00000043324	-	99	82.210	Pan_troglodytes
ENSAMXG00000033665	prdm12b	90	88.024	ENSPANG00000025967	PRDM12	99	82.432	Papio_anubis
ENSAMXG00000033665	prdm12b	100	87.200	ENSPKIG00000007228	prdm12b	100	86.400	Paramormyrops_kingsleyae
ENSAMXG00000033665	prdm12b	94	78.470	ENSPKIG00000004305	PRDM12	95	81.381	Paramormyrops_kingsleyae
ENSAMXG00000033665	prdm12b	100	84.324	ENSPSIG00000006739	PRDM12	99	82.432	Pelodiscus_sinensis
ENSAMXG00000033665	prdm12b	100	76.607	ENSPMGG00000002356	-	100	76.864	Periophthalmus_magnuspinnatus
ENSAMXG00000033665	prdm12b	100	82.842	ENSPMGG00000008867	prdm12b	99	82.842	Periophthalmus_magnuspinnatus
ENSAMXG00000033665	prdm12b	96	83.425	ENSPEMG00000009969	Prdm12	90	88.323	Peromyscus_maniculatus_bairdii
ENSAMXG00000033665	prdm12b	100	85.445	ENSPCIG00000024119	PRDM12	99	83.558	Phascolarctos_cinereus
ENSAMXG00000033665	prdm12b	100	81.649	ENSPFOG00000019841	prdm12b	100	81.649	Poecilia_formosa
ENSAMXG00000033665	prdm12b	100	81.053	ENSPLAG00000016626	prdm12b	99	81.530	Poecilia_latipinna
ENSAMXG00000033665	prdm12b	96	81.148	ENSPMEG00000016698	prdm12b	99	81.644	Poecilia_mexicana
ENSAMXG00000033665	prdm12b	97	75.068	ENSPREG00000003211	-	96	75.068	Poecilia_reticulata
ENSAMXG00000033665	prdm12b	100	80.840	ENSPREG00000015073	prdm12b	99	81.316	Poecilia_reticulata
ENSAMXG00000033665	prdm12b	93	86.087	ENSPPYG00000019694	PRDM12	93	87.988	Pongo_abelii
ENSAMXG00000033665	prdm12b	90	88.623	ENSPCOG00000022255	PRDM12	99	83.019	Propithecus_coquereli
ENSAMXG00000033665	prdm12b	90	88.323	ENSPVAG00000001511	PRDM12	99	82.480	Pteropus_vampyrus
ENSAMXG00000033665	prdm12b	100	81.890	ENSPNYG00000009607	prdm12b	100	81.627	Pundamilia_nyererei
ENSAMXG00000033665	prdm12b	100	78.535	ENSPNYG00000013589	-	100	77.778	Pundamilia_nyererei
ENSAMXG00000033665	prdm12b	100	77.984	ENSPNAG00000013396	PRDM12	100	77.984	Pygocentrus_nattereri
ENSAMXG00000033665	prdm12b	100	96.486	ENSPNAG00000024532	prdm12b	100	96.486	Pygocentrus_nattereri
ENSAMXG00000033665	prdm12b	90	88.323	ENSRNOG00000009218	Prdm12	99	82.973	Rattus_norvegicus
ENSAMXG00000033665	prdm12b	87	88.199	ENSRBIG00000042712	PRDM12	91	85.373	Rhinopithecus_bieti
ENSAMXG00000033665	prdm12b	88	88.344	ENSRROG00000043554	PRDM12	99	88.037	Rhinopithecus_roxellana
ENSAMXG00000033665	prdm12b	100	84.677	ENSSHAG00000015972	PRDM12	99	83.065	Sarcophilus_harrisii
ENSAMXG00000033665	prdm12b	100	78.406	ENSSMAG00000003754	prdm12b	100	79.177	Scophthalmus_maximus
ENSAMXG00000033665	prdm12b	100	80.928	ENSSDUG00000023498	prdm12b	100	80.311	Seriola_dumerili
ENSAMXG00000033665	prdm12b	100	80.940	ENSSDUG00000019071	-	100	81.201	Seriola_dumerili
ENSAMXG00000033665	prdm12b	100	82.597	ENSSLDG00000009557	prdm12b	100	81.984	Seriola_lalandi_dorsalis
ENSAMXG00000033665	prdm12b	100	81.402	ENSSLDG00000013562	-	100	80.593	Seriola_lalandi_dorsalis
ENSAMXG00000033665	prdm12b	100	85.405	ENSSPUG00000013424	PRDM12	99	83.514	Sphenodon_punctatus
ENSAMXG00000033665	prdm12b	100	81.937	ENSSPAG00000018824	prdm12b	100	81.937	Stegastes_partitus
ENSAMXG00000033665	prdm12b	100	73.385	ENSSPAG00000022420	-	100	74.419	Stegastes_partitus
ENSAMXG00000033665	prdm12b	90	88.623	ENSSSCG00000005703	PRDM12	99	82.703	Sus_scrofa
ENSAMXG00000033665	prdm12b	100	82.400	ENSTRUG00000018659	prdm12b	100	80.800	Takifugu_rubripes
ENSAMXG00000033665	prdm12b	100	79.088	ENSTRUG00000013239	-	100	79.088	Takifugu_rubripes
ENSAMXG00000033665	prdm12b	100	76.471	ENSTNIG00000005859	-	99	75.936	Tetraodon_nigroviridis
ENSAMXG00000033665	prdm12b	100	81.333	ENSTNIG00000009020	prdm12b	99	81.233	Tetraodon_nigroviridis
ENSAMXG00000033665	prdm12b	90	88.623	ENSUAMG00000009653	PRDM12	91	88.323	Ursus_americanus
ENSAMXG00000033665	prdm12b	90	88.623	ENSVVUG00000027662	PRDM12	78	88.323	Vulpes_vulpes
ENSAMXG00000033665	prdm12b	100	82.400	ENSXCOG00000002836	prdm12b	99	82.620	Xiphophorus_couchianus
ENSAMXG00000033665	prdm12b	100	79.177	ENSXMAG00000028012	-	100	79.949	Xiphophorus_maculatus
ENSAMXG00000033665	prdm12b	100	82.667	ENSXMAG00000005537	prdm12b	100	82.667	Xiphophorus_maculatus