EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033712 (Gene tree)
Gene ID: 103029229
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein U-like protein 1
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 106811 bases
Position: chrAPWO02000713.1:65094-171904
Accession: 103029229
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000046298	SAP	PF02037.27	1.1e-10	1	1
ENSAMXP00000054467	SAP	PF02037.27	1.1e-10	1	1
ENSAMXP00000011878	SAP	PF02037.27	1.2e-10	1	1
ENSAMXP00000032175	SAP	PF02037.27	1.2e-10	1	1
ENSAMXP00000039561	SAP	PF02037.27	1.2e-10	1	1
ENSAMXP00000036446	SAP	PF02037.27	1.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042035	-	4750	XM_022686442	ENSAMXP00000054467	752 (aa)	XP_022542163	UPI000BBD9ADF
ENSAMXT00000029849	-	3741	-	ENSAMXP00000036446	713 (aa)	-	-
ENSAMXT00000057239	-	2648	-	ENSAMXP00000032175	779 (aa)	-	-
ENSAMXT00000011878	-	2645	XM_022686440	ENSAMXP00000011878	778 (aa)	XP_022542161	W5KWB6
ENSAMXT00000053620	-	4282	-	ENSAMXP00000046298	752 (aa)	-	UPI000BBD9ADF
ENSAMXT00000033366	-	4284	-	ENSAMXP00000039561	784 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033712's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033712	si:ch211-107m4.1	60	41.781	ENSAMXG00000013644	HNRNPUL1	77	34.177
ENSAMXG00000033712	si:ch211-107m4.1	64	41.290	ENSAMXG00000004623	-	68	60.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033712	si:ch211-107m4.1	70	40.646	ENSG00000214753	HNRNPUL2	91	52.174	Homo_sapiens
ENSAMXG00000033712	si:ch211-107m4.1	90	46.004	ENSAPOG00000005128	si:ch211-107m4.1	100	43.154	Acanthochromis_polyacanthus
ENSAMXG00000033712	si:ch211-107m4.1	79	47.758	ENSACIG00000022729	si:ch211-107m4.1	83	45.629	Amphilophus_citrinellus
ENSAMXG00000033712	si:ch211-107m4.1	79	50.117	ENSAOCG00000017297	si:ch211-107m4.1	95	45.057	Amphiprion_ocellaris
ENSAMXG00000033712	si:ch211-107m4.1	79	48.122	ENSAPEG00000009122	-	95	43.595	Amphiprion_percula
ENSAMXG00000033712	si:ch211-107m4.1	69	37.856	ENSACAG00000000746	-	92	34.368	Anolis_carolinensis
ENSAMXG00000033712	si:ch211-107m4.1	76	38.924	ENSANAG00000027153	-	99	36.010	Aotus_nancymaae
ENSAMXG00000033712	si:ch211-107m4.1	82	50.000	ENSACLG00000018069	si:ch211-107m4.1	96	50.000	Astatotilapia_calliptera
ENSAMXG00000033712	si:ch211-107m4.1	70	41.766	ENSBTAG00000002510	HNRNPUL2	83	52.174	Bos_taurus
ENSAMXG00000033712	si:ch211-107m4.1	70	40.306	ENSCJAG00000018709	-	99	35.523	Callithrix_jacchus
ENSAMXG00000033712	si:ch211-107m4.1	70	41.327	ENSCAFG00000015686	-	99	35.539	Canis_familiaris
ENSAMXG00000033712	si:ch211-107m4.1	70	41.327	ENSCAFG00020013120	-	99	35.539	Canis_lupus_dingo
ENSAMXG00000033712	si:ch211-107m4.1	70	41.596	ENSCHIG00000020213	-	83	52.174	Capra_hircus
ENSAMXG00000033712	si:ch211-107m4.1	76	36.640	ENSCCAG00000037674	-	88	52.174	Cebus_capucinus
ENSAMXG00000033712	si:ch211-107m4.1	70	40.476	ENSCATG00000034588	-	99	35.976	Cercocebus_atys
ENSAMXG00000033712	si:ch211-107m4.1	76	38.924	ENSCSAG00000006701	-	96	35.976	Chlorocebus_sabaeus
ENSAMXG00000033712	si:ch211-107m4.1	64	44.094	ENSCPBG00000017963	-	96	37.485	Chrysemys_picta_bellii
ENSAMXG00000033712	si:ch211-107m4.1	75	40.506	ENSCGRG00001017076	Hnrnpul2	89	52.174	Cricetulus_griseus_chok1gshd
ENSAMXG00000033712	si:ch211-107m4.1	74	54.098	ENSCSEG00000005686	si:ch211-107m4.1	87	54.098	Cynoglossus_semilaevis
ENSAMXG00000033712	si:ch211-107m4.1	84	58.140	ENSCVAG00000006862	si:ch211-107m4.1	99	58.140	Cyprinodon_variegatus
ENSAMXG00000033712	si:ch211-107m4.1	100	49.869	ENSDARG00000056830	si:ch211-107m4.1	99	50.129	Danio_rerio
ENSAMXG00000033712	si:ch211-107m4.1	81	53.333	ENSDNOG00000006508	-	89	54.348	Dasypus_novemcinctus
ENSAMXG00000033712	si:ch211-107m4.1	70	40.847	ENSDORG00000008678	Hnrnpul2	99	35.129	Dipodomys_ordii
ENSAMXG00000033712	si:ch211-107m4.1	70	41.327	ENSEASG00005011347	-	91	52.174	Equus_asinus_asinus
ENSAMXG00000033712	si:ch211-107m4.1	70	41.156	ENSECAG00000020298	-	91	52.174	Equus_caballus
ENSAMXG00000033712	si:ch211-107m4.1	77	76.190	ENSELUG00000008134	si:ch211-107m4.1	97	76.190	Esox_lucius
ENSAMXG00000033712	si:ch211-107m4.1	70	41.056	ENSFCAG00000014766	-	99	35.337	Felis_catus
ENSAMXG00000033712	si:ch211-107m4.1	68	61.905	ENSFHEG00000014731	si:ch211-107m4.1	90	48.057	Fundulus_heteroclitus
ENSAMXG00000033712	si:ch211-107m4.1	96	45.601	ENSGAFG00000016579	si:ch211-107m4.1	99	42.789	Gambusia_affinis
ENSAMXG00000033712	si:ch211-107m4.1	67	64.286	ENSGACG00000017006	si:ch211-107m4.1	77	64.286	Gasterosteus_aculeatus
ENSAMXG00000033712	si:ch211-107m4.1	66	42.066	ENSGAGG00000016818	-	93	37.160	Gopherus_agassizii
ENSAMXG00000033712	si:ch211-107m4.1	76	39.241	ENSGGOG00000011722	HNRNPUL2	98	52.174	Gorilla_gorilla
ENSAMXG00000033712	si:ch211-107m4.1	82	48.069	ENSHBUG00000013076	si:ch211-107m4.1	100	45.946	Haplochromis_burtoni
ENSAMXG00000033712	si:ch211-107m4.1	68	41.012	ENSHGLG00000003285	-	77	40.870	Heterocephalus_glaber_female
ENSAMXG00000033712	si:ch211-107m4.1	92	66.667	ENSIPUG00000009518	si:ch211-107m4.1	99	66.667	Ictalurus_punctatus
ENSAMXG00000033712	si:ch211-107m4.1	70	41.667	ENSSTOG00000004327	-	99	36.508	Ictidomys_tridecemlineatus
ENSAMXG00000033712	si:ch211-107m4.1	68	41.565	ENSJJAG00000011206	Hnrnpul2	82	52.174	Jaculus_jaculus
ENSAMXG00000033712	si:ch211-107m4.1	89	48.000	ENSKMAG00000003651	si:ch211-107m4.1	99	48.000	Kryptolebias_marmoratus
ENSAMXG00000033712	si:ch211-107m4.1	63	47.162	ENSLACG00000009304	-	99	36.101	Latimeria_chalumnae
ENSAMXG00000033712	si:ch211-107m4.1	68	40.522	ENSLAFG00000005377	-	99	35.688	Loxodonta_africana
ENSAMXG00000033712	si:ch211-107m4.1	70	40.476	ENSMFAG00000041014	-	99	35.976	Macaca_fascicularis
ENSAMXG00000033712	si:ch211-107m4.1	70	40.476	ENSMNEG00000036955	-	99	35.976	Macaca_nemestrina
ENSAMXG00000033712	si:ch211-107m4.1	82	47.541	ENSMAMG00000021489	si:ch211-107m4.1	97	47.541	Mastacembelus_armatus
ENSAMXG00000033712	si:ch211-107m4.1	82	50.000	ENSMZEG00005005136	si:ch211-107m4.1	96	50.000	Maylandia_zebra
ENSAMXG00000033712	si:ch211-107m4.1	70	41.837	ENSMAUG00000013163	Hnrnpul2	83	52.174	Mesocricetus_auratus
ENSAMXG00000033712	si:ch211-107m4.1	70	40.986	ENSMICG00000009943	-	83	54.348	Microcebus_murinus
ENSAMXG00000033712	si:ch211-107m4.1	60	43.299	ENSMOCG00000020000	Hnrnpul2	98	52.830	Microtus_ochrogaster
ENSAMXG00000033712	si:ch211-107m4.1	64	53.571	ENSMALG00000011564	si:ch211-107m4.1	85	53.571	Monopterus_albus
ENSAMXG00000033712	si:ch211-107m4.1	74	40.191	MGP_CAROLIEiJ_G0022656	Hnrnpul2	89	52.174	Mus_caroli
ENSAMXG00000033712	si:ch211-107m4.1	74	40.032	ENSMUSG00000071659	Hnrnpul2	89	52.174	Mus_musculus
ENSAMXG00000033712	si:ch211-107m4.1	74	40.640	MGP_PahariEiJ_G0014151	Hnrnpul2	89	52.174	Mus_pahari
ENSAMXG00000033712	si:ch211-107m4.1	74	39.872	MGP_SPRETEiJ_G0023569	Hnrnpul2	89	52.174	Mus_spretus
ENSAMXG00000033712	si:ch211-107m4.1	69	41.472	ENSMPUG00000013707	-	96	35.516	Mustela_putorius_furo
ENSAMXG00000033712	si:ch211-107m4.1	68	41.768	ENSMLUG00000000412	-	99	36.759	Myotis_lucifugus
ENSAMXG00000033712	si:ch211-107m4.1	68	42.234	ENSNGAG00000012005	Hnrnpul2	81	52.174	Nannospalax_galili
ENSAMXG00000033712	si:ch211-107m4.1	72	49.213	ENSNBRG00000000429	si:ch211-107m4.1	77	49.213	Neolamprologus_brichardi
ENSAMXG00000033712	si:ch211-107m4.1	75	60.526	ENSNLEG00000004077	-	89	54.348	Nomascus_leucogenys
ENSAMXG00000033712	si:ch211-107m4.1	82	49.333	ENSONIG00000005422	si:ch211-107m4.1	100	49.333	Oreochromis_niloticus
ENSAMXG00000033712	si:ch211-107m4.1	75	39.303	ENSOCUG00000009474	-	90	52.174	Oryctolagus_cuniculus
ENSAMXG00000033712	si:ch211-107m4.1	67	69.231	ENSORLG00000024574	si:ch211-107m4.1	78	69.231	Oryzias_latipes
ENSAMXG00000033712	si:ch211-107m4.1	72	53.448	ENSOMEG00000018153	si:ch211-107m4.1	86	53.448	Oryzias_melastigma
ENSAMXG00000033712	si:ch211-107m4.1	63	44.612	ENSOGAG00000003302	-	67	44.099	Otolemur_garnettii
ENSAMXG00000033712	si:ch211-107m4.1	70	41.667	ENSOARG00000016817	-	83	52.174	Ovis_aries
ENSAMXG00000033712	si:ch211-107m4.1	70	41.056	ENSPPRG00000006380	-	99	35.337	Panthera_pardus
ENSAMXG00000033712	si:ch211-107m4.1	76	39.241	ENSPTRG00000034359	HNRNPUL2	89	52.174	Pan_troglodytes
ENSAMXG00000033712	si:ch211-107m4.1	70	40.476	ENSPANG00000023745	-	99	36.849	Papio_anubis
ENSAMXG00000033712	si:ch211-107m4.1	69	41.781	ENSPEMG00000015546	Hnrnpul2	83	52.174	Peromyscus_maniculatus_bairdii
ENSAMXG00000033712	si:ch211-107m4.1	66	43.199	ENSPCIG00000015254	-	80	35.910	Phascolarctos_cinereus
ENSAMXG00000033712	si:ch211-107m4.1	87	44.689	ENSPFOG00000008050	si:ch211-107m4.1	99	45.109	Poecilia_formosa
ENSAMXG00000033712	si:ch211-107m4.1	67	66.667	ENSPLAG00000003485	si:ch211-107m4.1	99	42.560	Poecilia_latipinna
ENSAMXG00000033712	si:ch211-107m4.1	74	51.253	ENSPMEG00000005490	si:ch211-107m4.1	99	43.339	Poecilia_mexicana
ENSAMXG00000033712	si:ch211-107m4.1	72	50.000	ENSPREG00000014973	si:ch211-107m4.1	94	46.784	Poecilia_reticulata
ENSAMXG00000033712	si:ch211-107m4.1	68	41.391	ENSPCOG00000013502	-	82	52.174	Propithecus_coquereli
ENSAMXG00000033712	si:ch211-107m4.1	68	41.043	ENSPVAG00000003475	-	91	52.174	Pteropus_vampyrus
ENSAMXG00000033712	si:ch211-107m4.1	74	39.936	ENSRNOG00000019507	Hnrnpul2	89	52.174	Rattus_norvegicus
ENSAMXG00000033712	si:ch211-107m4.1	76	38.924	ENSRBIG00000037820	-	89	52.174	Rhinopithecus_bieti
ENSAMXG00000033712	si:ch211-107m4.1	76	38.924	ENSRROG00000036561	-	89	52.174	Rhinopithecus_roxellana
ENSAMXG00000033712	si:ch211-107m4.1	74	69.811	ENSSFOG00015006544	si:ch211-107m4.1	73	54.973	Scleropages_formosus
ENSAMXG00000033712	si:ch211-107m4.1	82	50.746	ENSSMAG00000017226	si:ch211-107m4.1	99	47.761	Scophthalmus_maximus
ENSAMXG00000033712	si:ch211-107m4.1	87	50.746	ENSSPAG00000006972	si:ch211-107m4.1	99	50.746	Stegastes_partitus
ENSAMXG00000033712	si:ch211-107m4.1	69	41.341	ENSSSCG00000028542	-	76	39.399	Sus_scrofa
ENSAMXG00000033712	si:ch211-107m4.1	83	66.667	ENSTRUG00000012843	si:ch211-107m4.1	97	66.667	Takifugu_rubripes
ENSAMXG00000033712	si:ch211-107m4.1	89	42.610	ENSTNIG00000000741	si:ch211-107m4.1	100	42.578	Tetraodon_nigroviridis
ENSAMXG00000033712	si:ch211-107m4.1	58	43.564	ENSTTRG00000002475	-	75	52.174	Tursiops_truncatus
ENSAMXG00000033712	si:ch211-107m4.1	70	41.327	ENSUAMG00000025971	-	99	35.539	Ursus_americanus
ENSAMXG00000033712	si:ch211-107m4.1	70	41.327	ENSVVUG00000029847	-	99	35.539	Vulpes_vulpes
ENSAMXG00000033712	si:ch211-107m4.1	73	39.400	ENSXETG00000006015	hnrnpul2	92	34.153	Xenopus_tropicalis
ENSAMXG00000033712	si:ch211-107m4.1	67	66.667	ENSXMAG00000003224	si:ch211-107m4.1	78	66.667	Xiphophorus_maculatus