EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033831 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 6915 bases
Position: chr14:17603078-17609992
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000035185	RVT_1	PF00078.27	1.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030671	-	2334	-	ENSAMXP00000035185	777 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000033831's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033831's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033831	-	85	45.778	ENSAMXG00000041694	-	69	45.630
ENSAMXG00000033831	-	81	68.189	ENSAMXG00000029689	-	83	68.189
ENSAMXG00000033831	-	80	47.894	ENSAMXG00000038544	-	94	47.894
ENSAMXG00000033831	-	82	94.811	ENSAMXG00000043875	-	92	94.811
ENSAMXG00000033831	-	94	67.121	ENSAMXG00000042699	-	62	68.279
ENSAMXG00000033831	-	83	49.398	ENSAMXG00000040915	-	78	48.869
ENSAMXG00000033831	-	81	48.074	ENSAMXG00000030934	-	97	48.074
ENSAMXG00000033831	-	94	65.229	ENSAMXG00000036897	-	99	64.738

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033831	-	76	34.345	ENSACAG00000029367	-	85	34.026	Anolis_carolinensis
ENSAMXG00000033831	-	84	45.662	ENSIPUG00000009957	-	94	46.423	Ictalurus_punctatus
ENSAMXG00000033831	-	85	43.778	ENSIPUG00000000467	-	86	44.378	Ictalurus_punctatus
ENSAMXG00000033831	-	85	45.263	ENSIPUG00000020583	-	93	44.428	Ictalurus_punctatus
ENSAMXG00000033831	-	77	50.083	ENSIPUG00000023478	-	90	50.083	Ictalurus_punctatus
ENSAMXG00000033831	-	83	39.722	ENSKMAG00000021728	-	94	39.722	Kryptolebias_marmoratus
ENSAMXG00000033831	-	72	31.643	ENSORLG00000004601	-	70	31.349	Oryzias_latipes
ENSAMXG00000033831	-	87	37.977	ENSORLG00000027546	-	93	37.755	Oryzias_latipes
ENSAMXG00000033831	-	81	38.889	ENSORLG00000025074	-	92	38.889	Oryzias_latipes
ENSAMXG00000033831	-	88	37.064	ENSORLG00020019360	-	96	37.064	Oryzias_latipes_hni
ENSAMXG00000033831	-	76	39.597	ENSORLG00020018037	-	86	39.597	Oryzias_latipes_hni
ENSAMXG00000033831	-	87	37.026	ENSORLG00020008270	-	95	37.026	Oryzias_latipes_hni
ENSAMXG00000033831	-	76	43.170	ENSPKIG00000000452	-	88	43.002	Paramormyrops_kingsleyae
ENSAMXG00000033831	-	76	42.256	ENSPKIG00000021000	-	96	41.872	Paramormyrops_kingsleyae
ENSAMXG00000033831	-	75	58.944	ENSPNAG00000014076	-	89	58.944	Pygocentrus_nattereri
ENSAMXG00000033831	-	86	51.101	ENSPNAG00000003267	-	98	51.395	Pygocentrus_nattereri