EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000033881 (Gene tree)
Gene ID: 103044481
Gene Symbol: farsb
Alias: cb428|farsl|zgc:92055
Full Name: phenylalanyl-tRNA synthetase subunit beta
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 15827 bases
Position: chr1:24250069-24265895
Accession: 103044481
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000003257	B3_4	PF03483.17	1.3e-26	1	1
ENSAMXP00000037361	B3_4	PF03483.17	1.4e-26	1	1
ENSAMXP00000042043	B3_4	PF03483.17	1.4e-26	1	1
ENSAMXP00000044686	B3_4	PF03483.17	1.4e-26	1	1
ENSAMXP00000037361	B5	PF03484.15	1.4e-14	1	1
ENSAMXP00000042043	B5	PF03484.15	1.4e-14	1	1
ENSAMXP00000044686	B5	PF03484.15	1.4e-14	1	1
ENSAMXP00000003257	B5	PF03484.15	1.9e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042360	-	6480	-	ENSAMXP00000042043	499 (aa)	-	-
ENSAMXT00000056919	-	6480	-	ENSAMXP00000037361	499 (aa)	-	-
ENSAMXT00000034600	-	6480	XM_022671472	ENSAMXP00000044686	499 (aa)	XP_022527193	-
ENSAMXT00000003257	-	1440	-	ENSAMXP00000003257	479 (aa)	-	W5K6P6

Gene Model

Click here to download ENSAMXG00000033881's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033881's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033881	farsb	100	74.200	ENSG00000116120	FARSB	85	74.200	Homo_sapiens
ENSAMXG00000033881	farsb	100	82.365	ENSAPOG00000013072	farsb	81	80.132	Acanthochromis_polyacanthus
ENSAMXG00000033881	farsb	100	74.400	ENSAMEG00000005984	FARSB	85	74.400	Ailuropoda_melanoleuca
ENSAMXG00000033881	farsb	100	78.557	ENSACIG00000021623	farsb	84	78.557	Amphilophus_citrinellus
ENSAMXG00000033881	farsb	100	81.964	ENSAOCG00000004912	farsb	84	78.357	Amphiprion_ocellaris
ENSAMXG00000033881	farsb	100	81.964	ENSAPEG00000001153	farsb	81	80.132	Amphiprion_percula
ENSAMXG00000033881	farsb	100	83.166	ENSATEG00000021441	farsb	59	83.166	Anabas_testudineus
ENSAMXG00000033881	farsb	99	76.210	ENSAPLG00000010292	FARSB	84	76.210	Anas_platyrhynchos
ENSAMXG00000033881	farsb	100	72.745	ENSACAG00000004769	FARSB	83	72.745	Anolis_carolinensis
ENSAMXG00000033881	farsb	100	73.200	ENSANAG00000024637	FARSB	85	73.200	Aotus_nancymaae
ENSAMXG00000033881	farsb	100	81.964	ENSACLG00000013951	farsb	85	82.353	Astatotilapia_calliptera
ENSAMXG00000033881	farsb	100	74.000	ENSBTAG00000045523	-	88	74.000	Bos_taurus
ENSAMXG00000033881	farsb	100	74.600	ENSBTAG00000011649	FARSB	85	74.600	Bos_taurus
ENSAMXG00000033881	farsb	99	58.000	WBGene00001498	fars-3	84	58.000	Caenorhabditis_elegans
ENSAMXG00000033881	farsb	100	74.000	ENSCJAG00000012181	FARSB	85	74.000	Callithrix_jacchus
ENSAMXG00000033881	farsb	100	74.400	ENSCAFG00000016094	-	85	74.400	Canis_familiaris
ENSAMXG00000033881	farsb	100	74.400	ENSCAFG00020026684	FARSB	89	74.400	Canis_lupus_dingo
ENSAMXG00000033881	farsb	100	75.000	ENSCHIG00000014275	FARSB	85	75.000	Capra_hircus
ENSAMXG00000033881	farsb	100	73.800	ENSTSYG00000008461	FARSB	85	73.800	Carlito_syrichta
ENSAMXG00000033881	farsb	100	68.493	ENSCAPG00000016436	FARSB	89	68.493	Cavia_aperea
ENSAMXG00000033881	farsb	100	73.000	ENSCPOG00000013109	FARSB	85	73.000	Cavia_porcellus
ENSAMXG00000033881	farsb	100	69.000	ENSCCAG00000025840	FARSB	84	69.000	Cebus_capucinus
ENSAMXG00000033881	farsb	100	74.000	ENSCATG00000036168	FARSB	85	74.000	Cercocebus_atys
ENSAMXG00000033881	farsb	100	74.200	ENSCLAG00000011954	FARSB	85	74.200	Chinchilla_lanigera
ENSAMXG00000033881	farsb	100	74.000	ENSCSAG00000007806	FARSB	85	74.000	Chlorocebus_sabaeus
ENSAMXG00000033881	farsb	77	73.127	ENSCHOG00000011785	FARSB	65	73.127	Choloepus_hoffmanni
ENSAMXG00000033881	farsb	100	74.349	ENSCPBG00000019346	FARSB	83	74.349	Chrysemys_picta_bellii
ENSAMXG00000033881	farsb	99	60.079	ENSCING00000004180	-	84	60.079	Ciona_intestinalis
ENSAMXG00000033881	farsb	99	60.277	ENSCSAVG00000005346	-	90	60.277	Ciona_savignyi
ENSAMXG00000033881	farsb	100	73.800	ENSCANG00000036239	FARSB	88	73.800	Colobus_angolensis_palliatus
ENSAMXG00000033881	farsb	100	75.200	ENSCGRG00001022928	Farsb	85	75.200	Cricetulus_griseus_chok1gshd
ENSAMXG00000033881	farsb	100	75.200	ENSCGRG00000001513	Farsb	85	75.200	Cricetulus_griseus_crigri
ENSAMXG00000033881	farsb	100	82.365	ENSCSEG00000005415	farsb	96	79.095	Cynoglossus_semilaevis
ENSAMXG00000033881	farsb	72	80.556	ENSCVAG00000018815	farsb	78	80.556	Cyprinodon_variegatus
ENSAMXG00000033881	farsb	100	85.200	ENSDARG00000016864	farsb	85	85.200	Danio_rerio
ENSAMXG00000033881	farsb	100	72.400	ENSDNOG00000002511	FARSB	85	72.400	Dasypus_novemcinctus
ENSAMXG00000033881	farsb	100	74.000	ENSDORG00000011102	Farsb	85	74.000	Dipodomys_ordii
ENSAMXG00000033881	farsb	100	61.829	FBgn0039175	beta-PheRS	85	61.829	Drosophila_melanogaster
ENSAMXG00000033881	farsb	100	72.800	ENSETEG00000015080	FARSB	88	72.800	Echinops_telfairi
ENSAMXG00000033881	farsb	100	66.400	ENSEBUG00000006846	farsb	85	66.400	Eptatretus_burgeri
ENSAMXG00000033881	farsb	100	73.800	ENSEASG00005011297	FARSB	85	73.800	Equus_asinus_asinus
ENSAMXG00000033881	farsb	100	74.000	ENSECAG00000023086	FARSB	82	74.505	Equus_caballus
ENSAMXG00000033881	farsb	89	65.743	ENSEEUG00000007441	FARSB	75	65.743	Erinaceus_europaeus
ENSAMXG00000033881	farsb	100	87.174	ENSELUG00000014767	farsb	100	83.367	Esox_lucius
ENSAMXG00000033881	farsb	100	74.200	ENSFCAG00000026772	FARSB	85	74.200	Felis_catus
ENSAMXG00000033881	farsb	99	75.000	ENSFALG00000006739	FARSB	84	75.000	Ficedula_albicollis
ENSAMXG00000033881	farsb	100	73.400	ENSFDAG00000008871	FARSB	85	73.400	Fukomys_damarensis
ENSAMXG00000033881	farsb	100	81.563	ENSFHEG00000020939	farsb	82	82.080	Fundulus_heteroclitus
ENSAMXG00000033881	farsb	90	82.183	ENSGMOG00000013047	farsb	83	82.183	Gadus_morhua
ENSAMXG00000033881	farsb	99	74.798	ENSGALG00000005236	FARSB	84	74.798	Gallus_gallus
ENSAMXG00000033881	farsb	100	80.361	ENSGAFG00000020900	farsb	83	67.535	Gambusia_affinis
ENSAMXG00000033881	farsb	90	82.628	ENSGACG00000000261	farsb	83	82.628	Gasterosteus_aculeatus
ENSAMXG00000033881	farsb	100	74.749	ENSGAGG00000016575	FARSB	83	74.749	Gopherus_agassizii
ENSAMXG00000033881	farsb	100	81.764	ENSHBUG00000022379	farsb	84	79.435	Haplochromis_burtoni
ENSAMXG00000033881	farsb	100	73.400	ENSHGLG00000015965	FARSB	85	73.400	Heterocephalus_glaber_female
ENSAMXG00000033881	farsb	100	73.400	ENSHGLG00100001035	FARSB	85	73.400	Heterocephalus_glaber_male
ENSAMXG00000033881	farsb	95	79.412	ENSHCOG00000016462	farsb	94	79.412	Hippocampus_comes
ENSAMXG00000033881	farsb	100	86.774	ENSIPUG00000002754	farsb	85	86.774	Ictalurus_punctatus
ENSAMXG00000033881	farsb	100	73.800	ENSSTOG00000016169	FARSB	85	73.800	Ictidomys_tridecemlineatus
ENSAMXG00000033881	farsb	100	73.200	ENSJJAG00000003267	Farsb	85	73.200	Jaculus_jaculus
ENSAMXG00000033881	farsb	88	82.688	ENSKMAG00000005363	farsb	96	68.714	Kryptolebias_marmoratus
ENSAMXG00000033881	farsb	100	80.361	ENSLBEG00000018127	farsb	59	80.361	Labrus_bergylta
ENSAMXG00000033881	farsb	100	77.355	ENSLACG00000002551	FARSB	85	77.355	Latimeria_chalumnae
ENSAMXG00000033881	farsb	99	83.534	ENSLOCG00000004136	farsb	85	83.534	Lepisosteus_oculatus
ENSAMXG00000033881	farsb	100	73.400	ENSLAFG00000015659	FARSB	85	73.400	Loxodonta_africana
ENSAMXG00000033881	farsb	100	73.800	ENSMFAG00000036645	FARSB	85	73.800	Macaca_fascicularis
ENSAMXG00000033881	farsb	100	70.800	ENSMMUG00000007685	FARSB	84	70.800	Macaca_mulatta
ENSAMXG00000033881	farsb	100	74.000	ENSMNEG00000030672	FARSB	85	74.000	Macaca_nemestrina
ENSAMXG00000033881	farsb	100	74.000	ENSMLEG00000042060	FARSB	85	74.000	Mandrillus_leucophaeus
ENSAMXG00000033881	farsb	100	81.363	ENSMAMG00000011835	farsb	84	73.547	Mastacembelus_armatus
ENSAMXG00000033881	farsb	95	82.353	ENSMZEG00005004544	farsb	85	82.353	Maylandia_zebra
ENSAMXG00000033881	farsb	99	74.194	ENSMGAG00000004670	FARSB	89	74.194	Meleagris_gallopavo
ENSAMXG00000033881	farsb	72	69.697	ENSMAUG00000017805	Farsb	83	69.697	Mesocricetus_auratus
ENSAMXG00000033881	farsb	100	74.400	ENSMICG00000002495	FARSB	85	74.400	Microcebus_murinus
ENSAMXG00000033881	farsb	100	75.551	ENSMOCG00000003181	Farsb	97	65.288	Microtus_ochrogaster
ENSAMXG00000033881	farsb	99	73.494	ENSMMOG00000006265	farsb	83	73.494	Mola_mola
ENSAMXG00000033881	farsb	100	75.150	ENSMODG00000021192	FARSB	85	75.150	Monodelphis_domestica
ENSAMXG00000033881	farsb	93	82.721	ENSMALG00000021188	farsb	77	82.721	Monopterus_albus
ENSAMXG00000033881	farsb	100	74.000	MGP_CAROLIEiJ_G0014310	Farsb	99	73.077	Mus_caroli
ENSAMXG00000033881	farsb	100	73.800	ENSMUSG00000026245	Farsb	99	71.915	Mus_musculus
ENSAMXG00000033881	farsb	100	74.000	MGP_PahariEiJ_G0027548	Farsb	99	72.766	Mus_pahari
ENSAMXG00000033881	farsb	100	73.800	MGP_SPRETEiJ_G0015116	Farsb	99	72.340	Mus_spretus
ENSAMXG00000033881	farsb	100	74.000	ENSMPUG00000016677	FARSB	85	74.000	Mustela_putorius_furo
ENSAMXG00000033881	farsb	100	74.800	ENSMLUG00000010904	FARSB	85	74.800	Myotis_lucifugus
ENSAMXG00000033881	farsb	100	73.547	ENSNGAG00000014602	Farsb	85	73.547	Nannospalax_galili
ENSAMXG00000033881	farsb	100	82.164	ENSNBRG00000003198	farsb	96	71.009	Neolamprologus_brichardi
ENSAMXG00000033881	farsb	100	74.200	ENSNLEG00000009638	FARSB	85	74.200	Nomascus_leucogenys
ENSAMXG00000033881	farsb	100	64.930	ENSMEUG00000010798	FARSB	85	64.930	Notamacropus_eugenii
ENSAMXG00000033881	farsb	87	66.791	ENSOPRG00000003292	FARSB	71	66.791	Ochotona_princeps
ENSAMXG00000033881	farsb	100	73.800	ENSODEG00000005451	FARSB	85	73.800	Octodon_degus
ENSAMXG00000033881	farsb	100	82.164	ENSONIG00000014639	farsb	85	82.164	Oreochromis_niloticus
ENSAMXG00000033881	farsb	90	75.056	ENSOANG00000015387	FARSB	84	75.056	Ornithorhynchus_anatinus
ENSAMXG00000033881	farsb	90	74.554	ENSOCUG00000007828	FARSB	78	74.554	Oryctolagus_cuniculus
ENSAMXG00000033881	farsb	100	81.363	ENSORLG00000009135	farsb	84	78.357	Oryzias_latipes
ENSAMXG00000033881	farsb	100	81.363	ENSORLG00015001072	farsb	73	81.363	Oryzias_latipes_hsok
ENSAMXG00000033881	farsb	100	81.363	ENSOMEG00000019009	farsb	84	76.152	Oryzias_melastigma
ENSAMXG00000033881	farsb	100	67.323	ENSOGAG00000010125	FARSB	85	67.323	Otolemur_garnettii
ENSAMXG00000033881	farsb	100	75.000	ENSOARG00000020329	FARSB	85	75.000	Ovis_aries
ENSAMXG00000033881	farsb	100	74.600	ENSPPAG00000039268	FARSB	99	75.565	Pan_paniscus
ENSAMXG00000033881	farsb	100	74.000	ENSPPRG00000010687	FARSB	85	74.000	Panthera_pardus
ENSAMXG00000033881	farsb	100	74.200	ENSPTIG00000004299	FARSB	85	74.200	Panthera_tigris_altaica
ENSAMXG00000033881	farsb	100	74.600	ENSPTRG00000012974	FARSB	85	74.600	Pan_troglodytes
ENSAMXG00000033881	farsb	100	74.000	ENSPANG00000016304	FARSB	85	74.000	Papio_anubis
ENSAMXG00000033881	farsb	100	83.166	ENSPKIG00000006661	farsb	85	83.166	Paramormyrops_kingsleyae
ENSAMXG00000033881	farsb	100	74.349	ENSPSIG00000006248	FARSB	85	74.349	Pelodiscus_sinensis
ENSAMXG00000033881	farsb	98	82.136	ENSPMGG00000002815	farsb	99	82.136	Periophthalmus_magnuspinnatus
ENSAMXG00000033881	farsb	52	30.337	ENSPEMG00000021068	Lrrc47	69	30.337	Peromyscus_maniculatus_bairdii
ENSAMXG00000033881	farsb	100	74.800	ENSPEMG00000003131	Farsb	85	74.800	Peromyscus_maniculatus_bairdii
ENSAMXG00000033881	farsb	100	75.150	ENSPCIG00000019458	FARSB	85	75.150	Phascolarctos_cinereus
ENSAMXG00000033881	farsb	100	82.164	ENSPLAG00000001104	farsb	87	74.349	Poecilia_latipinna
ENSAMXG00000033881	farsb	100	82.565	ENSPMEG00000017658	farsb	87	74.749	Poecilia_mexicana
ENSAMXG00000033881	farsb	100	81.764	ENSPREG00000010583	farsb	83	73.948	Poecilia_reticulata
ENSAMXG00000033881	farsb	100	74.200	ENSPPYG00000013221	FARSB	85	74.200	Pongo_abelii
ENSAMXG00000033881	farsb	100	67.600	ENSPCAG00000002757	FARSB	85	67.600	Procavia_capensis
ENSAMXG00000033881	farsb	70	64.756	ENSPCOG00000028852	FARSB	89	64.756	Propithecus_coquereli
ENSAMXG00000033881	farsb	100	74.000	ENSPVAG00000006985	FARSB	85	74.000	Pteropus_vampyrus
ENSAMXG00000033881	farsb	99	67.540	ENSPNYG00000011433	farsb	83	67.540	Pundamilia_nyererei
ENSAMXG00000033881	farsb	100	91.383	ENSPNAG00000021802	farsb	85	91.383	Pygocentrus_nattereri
ENSAMXG00000033881	farsb	100	74.200	ENSRNOG00000014119	Farsb	85	74.200	Rattus_norvegicus
ENSAMXG00000033881	farsb	91	74.393	ENSRBIG00000033191	FARSB	82	74.286	Rhinopithecus_bieti
ENSAMXG00000033881	farsb	100	74.000	ENSRROG00000029388	FARSB	85	74.000	Rhinopithecus_roxellana
ENSAMXG00000033881	farsb	97	45.941	YLR060W	FRS1	96	40.451	Saccharomyces_cerevisiae
ENSAMXG00000033881	farsb	100	66.000	ENSSBOG00000019084	FARSB	83	66.000	Saimiri_boliviensis_boliviensis
ENSAMXG00000033881	farsb	90	69.365	ENSSHAG00000015752	FARSB	83	69.365	Sarcophilus_harrisii
ENSAMXG00000033881	farsb	99	80.847	ENSSFOG00015007850	farsb	86	80.847	Scleropages_formosus
ENSAMXG00000033881	farsb	100	82.565	ENSSMAG00000020668	farsb	84	79.960	Scophthalmus_maximus
ENSAMXG00000033881	farsb	100	82.365	ENSSDUG00000009685	farsb	85	76.846	Seriola_dumerili
ENSAMXG00000033881	farsb	100	81.964	ENSSLDG00000025206	farsb	84	77.355	Seriola_lalandi_dorsalis
ENSAMXG00000033881	farsb	71	78.873	ENSSARG00000005655	-	65	78.873	Sorex_araneus
ENSAMXG00000033881	farsb	100	69.539	ENSSPUG00000002245	FARSB	88	69.539	Sphenodon_punctatus
ENSAMXG00000033881	farsb	100	81.964	ENSSPAG00000007367	farsb	59	81.964	Stegastes_partitus
ENSAMXG00000033881	farsb	100	73.800	ENSSSCG00000016226	-	85	73.800	Sus_scrofa
ENSAMXG00000033881	farsb	100	68.400	ENSSSCG00000032016	-	85	68.400	Sus_scrofa
ENSAMXG00000033881	farsb	99	74.194	ENSTGUG00000007788	FARSB	87	74.194	Taeniopygia_guttata
ENSAMXG00000033881	farsb	100	78.758	ENSTRUG00000009483	farsb	59	78.758	Takifugu_rubripes
ENSAMXG00000033881	farsb	100	79.359	ENSTNIG00000014310	farsb	85	79.359	Tetraodon_nigroviridis
ENSAMXG00000033881	farsb	100	46.092	ENSTBEG00000003136	FARSB	85	46.092	Tupaia_belangeri
ENSAMXG00000033881	farsb	86	76.382	ENSTTRG00000009082	FARSB	73	76.382	Tursiops_truncatus
ENSAMXG00000033881	farsb	100	72.854	ENSUAMG00000024613	FARSB	99	72.854	Ursus_americanus
ENSAMXG00000033881	farsb	100	74.600	ENSUMAG00000017995	FARSB	85	74.600	Ursus_maritimus
ENSAMXG00000033881	farsb	90	71.239	ENSVPAG00000006844	FARSB	83	71.239	Vicugna_pacos
ENSAMXG00000033881	farsb	100	74.400	ENSVVUG00000024025	FARSB	85	74.400	Vulpes_vulpes
ENSAMXG00000033881	farsb	100	73.146	ENSXETG00000002934	farsb	85	73.146	Xenopus_tropicalis
ENSAMXG00000033881	farsb	100	81.563	ENSXMAG00000008280	farsb	96	64.074	Xiphophorus_maculatus