EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000033978 (Gene tree)
Gene ID: 111194264
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111194264
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 7004 bases
Position: chr2:2845569-2852572
Accession: 111194264
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000044593	MMR_HSR1	PF01926.23	6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033155	-	5111	XM_022677801	ENSAMXP00000044593	1294 (aa)	XP_022533522	UPI000BBE0470

Gene Model

Click here to download ENSAMXG00000033978's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000033978's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000033978	-	100	94.903	ENSAMXG00000031410	-	100	94.903

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000033978	-	79	42.927	ENSACAG00000028691	-	97	42.927	Anolis_carolinensis
ENSAMXG00000033978	-	95	42.776	ENSACLG00000022932	-	99	42.454	Astatotilapia_calliptera
ENSAMXG00000033978	-	71	39.112	ENSCPBG00000009862	-	81	39.069	Chrysemys_picta_bellii
ENSAMXG00000033978	-	99	60.109	ENSELUG00000005671	-	99	60.109	Esox_lucius
ENSAMXG00000033978	-	95	45.324	ENSELUG00000007062	-	95	45.164	Esox_lucius
ENSAMXG00000033978	-	87	48.007	ENSGAGG00000006690	-	99	47.653	Gopherus_agassizii
ENSAMXG00000033978	-	98	42.925	ENSKMAG00000016912	-	98	43.082	Kryptolebias_marmoratus
ENSAMXG00000033978	-	97	44.348	ENSKMAG00000011534	-	99	43.908	Kryptolebias_marmoratus
ENSAMXG00000033978	-	99	74.787	ENSPNAG00000004915	-	99	74.787	Pygocentrus_nattereri
ENSAMXG00000033978	-	99	42.568	ENSSMAG00000004655	-	99	42.545	Scophthalmus_maximus
ENSAMXG00000033978	-	97	43.715	ENSSDUG00000017025	-	99	43.557	Seriola_dumerili
ENSAMXG00000033978	-	89	44.795	ENSSLDG00000002567	-	100	44.508	Seriola_lalandi_dorsalis
ENSAMXG00000033978	-	71	44.613	ENSSPUG00000001872	-	89	44.398	Sphenodon_punctatus
ENSAMXG00000033978	-	66	36.185	ENSSPUG00000001864	-	91	36.185	Sphenodon_punctatus
ENSAMXG00000033978	-	97	42.958	ENSXMAG00000024425	-	99	42.958	Xiphophorus_maculatus