EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000034117 (Gene tree)
Gene ID: 103040441
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4943 bases
Position: chrAPWO02000027.1:7033670-7038612
Accession: 103040441
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000050584	Pept_tRNA_hydro	PF01195.19	7.9e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000034856	-	1518	XM_007230016	ENSAMXP00000050584	267 (aa)	XP_007230078	UPI000BBD4A69

Gene Model

Click here to download ENSAMXG00000034117's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034117's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034117	ptrh1	66	56.497	ENSG00000187024	PTRH1	83	56.497	Homo_sapiens
ENSAMXG00000034117	ptrh1	91	59.756	ENSAPOG00000000947	PTRH1	86	59.756	Acanthochromis_polyacanthus
ENSAMXG00000034117	ptrh1	91	59.756	ENSAPOG00000003014	-	86	59.756	Acanthochromis_polyacanthus
ENSAMXG00000034117	ptrh1	91	59.756	ENSAPOG00000010719	ptrh1	86	59.756	Acanthochromis_polyacanthus
ENSAMXG00000034117	ptrh1	66	53.107	ENSAMEG00000016791	PTRH1	84	53.107	Ailuropoda_melanoleuca
ENSAMXG00000034117	ptrh1	75	69.608	ENSACIG00000006734	ptrh1	88	69.608	Amphilophus_citrinellus
ENSAMXG00000034117	ptrh1	91	61.382	ENSAOCG00000009725	ptrh1	86	61.382	Amphiprion_ocellaris
ENSAMXG00000034117	ptrh1	91	61.382	ENSAPEG00000020993	ptrh1	86	61.382	Amphiprion_percula
ENSAMXG00000034117	ptrh1	94	62.016	ENSATEG00000010003	ptrh1	91	62.016	Anabas_testudineus
ENSAMXG00000034117	ptrh1	66	57.627	ENSANAG00000025547	PTRH1	83	57.627	Aotus_nancymaae
ENSAMXG00000034117	ptrh1	94	61.154	ENSACLG00000025462	ptrh1	93	64.435	Astatotilapia_calliptera
ENSAMXG00000034117	ptrh1	56	52.903	ENSBTAG00000012736	PTRH1	55	52.903	Bos_taurus
ENSAMXG00000034117	ptrh1	66	56.818	ENSCJAG00000019841	PTRH1	64	56.897	Callithrix_jacchus
ENSAMXG00000034117	ptrh1	66	55.056	ENSCAFG00000020123	PTRH1	83	55.056	Canis_familiaris
ENSAMXG00000034117	ptrh1	66	55.367	ENSCAFG00020015776	PTRH1	80	55.367	Canis_lupus_dingo
ENSAMXG00000034117	ptrh1	66	57.062	ENSCHIG00000008188	PTRH1	83	57.062	Capra_hircus
ENSAMXG00000034117	ptrh1	69	53.804	ENSCPOG00000023968	PTRH1	86	53.804	Cavia_porcellus
ENSAMXG00000034117	ptrh1	66	57.062	ENSCCAG00000023134	PTRH1	83	57.062	Cebus_capucinus
ENSAMXG00000034117	ptrh1	66	56.497	ENSCATG00000042852	PTRH1	83	56.497	Cercocebus_atys
ENSAMXG00000034117	ptrh1	71	53.968	ENSCLAG00000011155	PTRH1	88	53.968	Chinchilla_lanigera
ENSAMXG00000034117	ptrh1	66	56.497	ENSCSAG00000013748	PTRH1	78	56.180	Chlorocebus_sabaeus
ENSAMXG00000034117	ptrh1	67	51.397	ENSCPBG00000025207	PTRH1	100	51.397	Chrysemys_picta_bellii
ENSAMXG00000034117	ptrh1	66	56.497	ENSCANG00000039856	PTRH1	83	56.497	Colobus_angolensis_palliatus
ENSAMXG00000034117	ptrh1	72	55.497	ENSCGRG00001013108	Ptrh1	93	55.497	Cricetulus_griseus_chok1gshd
ENSAMXG00000034117	ptrh1	68	57.143	ENSCGRG00000016553	Ptrh1	99	57.143	Cricetulus_griseus_crigri
ENSAMXG00000034117	ptrh1	92	57.588	ENSCSEG00000010332	ptrh1	92	57.588	Cynoglossus_semilaevis
ENSAMXG00000034117	ptrh1	96	56.667	ENSCVAG00000010701	ptrh1	99	56.667	Cyprinodon_variegatus
ENSAMXG00000034117	ptrh1	100	65.314	ENSDARG00000098206	ptrh1	98	68.261	Danio_rerio
ENSAMXG00000034117	ptrh1	67	56.180	ENSDNOG00000024194	PTRH1	83	56.180	Dasypus_novemcinctus
ENSAMXG00000034117	ptrh1	66	56.818	ENSDORG00000013321	Ptrh1	82	56.818	Dipodomys_ordii
ENSAMXG00000034117	ptrh1	66	57.627	ENSEASG00005020466	PTRH1	83	57.627	Equus_asinus_asinus
ENSAMXG00000034117	ptrh1	65	58.621	ENSECAG00000007615	PTRH1	64	58.621	Equus_caballus
ENSAMXG00000034117	ptrh1	99	59.041	ENSELUG00000015467	ptrh1	100	59.041	Esox_lucius
ENSAMXG00000034117	ptrh1	66	56.497	ENSFCAG00000001483	PTRH1	83	56.497	Felis_catus
ENSAMXG00000034117	ptrh1	65	51.955	ENSFALG00000001352	PTRH1	85	51.955	Ficedula_albicollis
ENSAMXG00000034117	ptrh1	71	55.026	ENSFDAG00000020077	PTRH1	92	55.026	Fukomys_damarensis
ENSAMXG00000034117	ptrh1	87	61.983	ENSFHEG00000010590	ptrh1	98	60.153	Fundulus_heteroclitus
ENSAMXG00000034117	ptrh1	53	58.156	ENSGMOG00000009801	PTRH1	97	58.156	Gadus_morhua
ENSAMXG00000034117	ptrh1	92	60.643	ENSGAFG00000016215	ptrh1	93	60.643	Gambusia_affinis
ENSAMXG00000034117	ptrh1	79	64.286	ENSGACG00000014682	ptrh1	89	74.118	Gasterosteus_aculeatus
ENSAMXG00000034117	ptrh1	76	50.495	ENSGAGG00000022860	PTRH1	88	50.495	Gopherus_agassizii
ENSAMXG00000034117	ptrh1	66	56.497	ENSGGOG00000011033	PTRH1	83	56.497	Gorilla_gorilla
ENSAMXG00000034117	ptrh1	94	61.154	ENSHBUG00000020824	ptrh1	92	61.154	Haplochromis_burtoni
ENSAMXG00000034117	ptrh1	70	55.080	ENSHGLG00000019147	PTRH1	92	55.080	Heterocephalus_glaber_female
ENSAMXG00000034117	ptrh1	70	51.337	ENSHGLG00100003681	PTRH1	94	51.337	Heterocephalus_glaber_male
ENSAMXG00000034117	ptrh1	83	59.735	ENSHCOG00000014772	ptrh1	92	55.556	Hippocampus_comes
ENSAMXG00000034117	ptrh1	96	72.797	ENSIPUG00000015364	ptrh1	96	75.610	Ictalurus_punctatus
ENSAMXG00000034117	ptrh1	61	57.055	ENSSTOG00000008942	PTRH1	83	55.618	Ictidomys_tridecemlineatus
ENSAMXG00000034117	ptrh1	66	57.143	ENSJJAG00000014338	Ptrh1	85	57.143	Jaculus_jaculus
ENSAMXG00000034117	ptrh1	94	59.375	ENSKMAG00000003253	ptrh1	92	59.375	Kryptolebias_marmoratus
ENSAMXG00000034117	ptrh1	74	59.596	ENSLACG00000016741	PTRH1	77	59.596	Latimeria_chalumnae
ENSAMXG00000034117	ptrh1	66	52.809	ENSLAFG00000021934	PTRH1	87	52.809	Loxodonta_africana
ENSAMXG00000034117	ptrh1	66	56.497	ENSMFAG00000001700	PTRH1	83	56.497	Macaca_fascicularis
ENSAMXG00000034117	ptrh1	66	56.497	ENSMMUG00000016424	PTRH1	83	56.497	Macaca_mulatta
ENSAMXG00000034117	ptrh1	66	56.497	ENSMNEG00000033061	PTRH1	78	56.180	Macaca_nemestrina
ENSAMXG00000034117	ptrh1	81	62.673	ENSMAMG00000017386	ptrh1	93	58.594	Mastacembelus_armatus
ENSAMXG00000034117	ptrh1	87	64.017	ENSMZEG00005020001	ptrh1	93	64.017	Maylandia_zebra
ENSAMXG00000034117	ptrh1	70	56.452	ENSMAUG00000006266	Ptrh1	91	56.452	Mesocricetus_auratus
ENSAMXG00000034117	ptrh1	66	56.497	ENSMICG00000005611	PTRH1	82	56.497	Microcebus_murinus
ENSAMXG00000034117	ptrh1	66	57.714	ENSMOCG00000013992	Ptrh1	86	57.714	Microtus_ochrogaster
ENSAMXG00000034117	ptrh1	99	57.706	ENSMMOG00000014747	ptrh1	96	58.781	Mola_mola
ENSAMXG00000034117	ptrh1	69	53.476	ENSMODG00000005503	PTRH1	86	53.476	Monodelphis_domestica
ENSAMXG00000034117	ptrh1	55	65.333	ENSMALG00000005392	ptrh1	88	65.333	Monopterus_albus
ENSAMXG00000034117	ptrh1	66	57.143	MGP_CAROLIEiJ_G0023450	Ptrh1	86	57.143	Mus_caroli
ENSAMXG00000034117	ptrh1	66	57.143	ENSMUSG00000053746	Ptrh1	86	57.143	Mus_musculus
ENSAMXG00000034117	ptrh1	66	57.143	MGP_PahariEiJ_G0024907	Ptrh1	86	57.143	Mus_pahari
ENSAMXG00000034117	ptrh1	66	56.571	MGP_SPRETEiJ_G0024367	Ptrh1	86	56.571	Mus_spretus
ENSAMXG00000034117	ptrh1	66	54.190	ENSMPUG00000013790	PTRH1	83	54.190	Mustela_putorius_furo
ENSAMXG00000034117	ptrh1	67	52.381	ENSMLUG00000013454	PTRH1	85	52.660	Myotis_lucifugus
ENSAMXG00000034117	ptrh1	67	55.618	ENSNGAG00000014008	Ptrh1	87	55.618	Nannospalax_galili
ENSAMXG00000034117	ptrh1	94	61.154	ENSNBRG00000015590	ptrh1	92	61.154	Neolamprologus_brichardi
ENSAMXG00000034117	ptrh1	66	55.932	ENSNLEG00000017468	PTRH1	83	55.932	Nomascus_leucogenys
ENSAMXG00000034117	ptrh1	70	55.080	ENSODEG00000004012	PTRH1	89	55.080	Octodon_degus
ENSAMXG00000034117	ptrh1	92	59.761	ENSONIG00000013912	ptrh1	95	62.151	Oreochromis_niloticus
ENSAMXG00000034117	ptrh1	59	58.228	ENSOANG00000011891	PTRH1	81	54.839	Ornithorhynchus_anatinus
ENSAMXG00000034117	ptrh1	66	56.497	ENSOCUG00000006894	PTRH1	77	56.497	Oryctolagus_cuniculus
ENSAMXG00000034117	ptrh1	70	55.914	ENSOGAG00000008094	PTRH1	89	55.914	Otolemur_garnettii
ENSAMXG00000034117	ptrh1	67	51.323	ENSOARG00000011808	PTRH1	84	51.323	Ovis_aries
ENSAMXG00000034117	ptrh1	66	56.497	ENSPPAG00000041782	PTRH1	83	56.497	Pan_paniscus
ENSAMXG00000034117	ptrh1	66	56.497	ENSPPRG00000007889	PTRH1	83	56.497	Panthera_pardus
ENSAMXG00000034117	ptrh1	66	56.497	ENSPTRG00000021394	PTRH1	83	56.497	Pan_troglodytes
ENSAMXG00000034117	ptrh1	66	47.778	ENSPANG00000031755	PTRH1	82	47.778	Papio_anubis
ENSAMXG00000034117	ptrh1	77	66.667	ENSPKIG00000005449	ptrh1	68	66.667	Paramormyrops_kingsleyae
ENSAMXG00000034117	ptrh1	79	48.571	ENSPSIG00000013828	PTRH1	72	48.571	Pelodiscus_sinensis
ENSAMXG00000034117	ptrh1	79	56.481	ENSPMGG00000002148	ptrh1	86	51.751	Periophthalmus_magnuspinnatus
ENSAMXG00000034117	ptrh1	60	59.627	ENSPEMG00000014360	Ptrh1	90	53.234	Peromyscus_maniculatus_bairdii
ENSAMXG00000034117	ptrh1	91	60.887	ENSPFOG00000003715	ptrh1	93	60.887	Poecilia_formosa
ENSAMXG00000034117	ptrh1	91	60.484	ENSPLAG00000023354	ptrh1	92	60.484	Poecilia_latipinna
ENSAMXG00000034117	ptrh1	91	60.887	ENSPMEG00000000447	ptrh1	93	60.887	Poecilia_mexicana
ENSAMXG00000034117	ptrh1	91	59.274	ENSPREG00000012612	ptrh1	93	59.274	Poecilia_reticulata
ENSAMXG00000034117	ptrh1	67	52.247	ENSPPYG00000019628	PTRH1	77	52.247	Pongo_abelii
ENSAMXG00000034117	ptrh1	66	56.497	ENSPCAG00000007016	PTRH1	82	56.497	Procavia_capensis
ENSAMXG00000034117	ptrh1	66	56.497	ENSPCOG00000014541	PTRH1	82	56.497	Propithecus_coquereli
ENSAMXG00000034117	ptrh1	66	57.062	ENSPVAG00000000954	PTRH1	83	57.062	Pteropus_vampyrus
ENSAMXG00000034117	ptrh1	96	59.551	ENSPNYG00000007789	ptrh1	95	59.551	Pundamilia_nyererei
ENSAMXG00000034117	ptrh1	100	76.667	ENSPNAG00000029930	ptrh1	100	76.667	Pygocentrus_nattereri
ENSAMXG00000034117	ptrh1	66	58.286	ENSRNOG00000049034	Ptrh1	86	58.286	Rattus_norvegicus
ENSAMXG00000034117	ptrh1	66	56.497	ENSRBIG00000027290	PTRH1	83	56.497	Rhinopithecus_bieti
ENSAMXG00000034117	ptrh1	66	56.497	ENSRROG00000028799	PTRH1	78	56.180	Rhinopithecus_roxellana
ENSAMXG00000034117	ptrh1	68	30.645	YHR189W	PTH1	94	30.645	Saccharomyces_cerevisiae
ENSAMXG00000034117	ptrh1	67	56.180	ENSSBOG00000026699	PTRH1	78	56.497	Saimiri_boliviensis_boliviensis
ENSAMXG00000034117	ptrh1	66	54.396	ENSSHAG00000018238	PTRH1	89	54.396	Sarcophilus_harrisii
ENSAMXG00000034117	ptrh1	73	66.837	ENSSFOG00015007053	ptrh1	86	68.966	Scleropages_formosus
ENSAMXG00000034117	ptrh1	73	65.049	ENSSMAG00000016747	ptrh1	87	65.049	Scophthalmus_maximus
ENSAMXG00000034117	ptrh1	90	60.494	ENSSDUG00000013471	ptrh1	87	73.457	Seriola_dumerili
ENSAMXG00000034117	ptrh1	76	64.423	ENSSLDG00000024662	ptrh1	92	66.346	Seriola_lalandi_dorsalis
ENSAMXG00000034117	ptrh1	67	53.889	ENSSPUG00000000040	PTRH1	79	53.889	Sphenodon_punctatus
ENSAMXG00000034117	ptrh1	87	61.373	ENSSPAG00000003298	ptrh1	92	68.852	Stegastes_partitus
ENSAMXG00000034117	ptrh1	66	56.497	ENSSSCG00000005615	PTRH1	83	56.497	Sus_scrofa
ENSAMXG00000034117	ptrh1	50	58.209	ENSTGUG00000003648	PTRH1	100	58.209	Taeniopygia_guttata
ENSAMXG00000034117	ptrh1	92	60.241	ENSTRUG00000019801	PTRH1	93	59.216	Takifugu_rubripes
ENSAMXG00000034117	ptrh1	79	64.319	ENSTNIG00000016735	ptrh1	94	64.319	Tetraodon_nigroviridis
ENSAMXG00000034117	ptrh1	66	52.542	ENSTTRG00000016458	PTRH1	83	52.542	Tursiops_truncatus
ENSAMXG00000034117	ptrh1	70	55.376	ENSUAMG00000023948	-	83	55.376	Ursus_americanus
ENSAMXG00000034117	ptrh1	65	46.821	ENSVPAG00000001805	PTRH1	95	46.821	Vicugna_pacos
ENSAMXG00000034117	ptrh1	66	55.367	ENSVVUG00000013198	PTRH1	80	55.367	Vulpes_vulpes
ENSAMXG00000034117	ptrh1	65	56.647	ENSXETG00000009980	ptrh1	93	56.647	Xenopus_tropicalis
ENSAMXG00000034117	ptrh1	75	67.662	ENSXCOG00000011498	ptrh1	86	67.662	Xiphophorus_couchianus
ENSAMXG00000034117	ptrh1	92	60.241	ENSXMAG00000009256	ptrh1	93	60.241	Xiphophorus_maculatus