EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000034192 (Gene tree)
Gene ID: 103023380
Gene Symbol: -
Alias: -
Full Name: GTP-binding protein SAR1b-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 5928 bases
Position: chr6:22046095-22052022
Accession: 103023380
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045387	MMR_HSR1	PF01926.23	9.5e-06	1	1
ENSAMXP00000031752	MMR_HSR1	PF01926.23	3.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055305	-	429	-	ENSAMXP00000031752	142 (aa)	-	-
ENSAMXT00000056144	-	3973	XM_007250129	ENSAMXP00000045387	218 (aa)	XP_007250191	-

Gene Model

Click here to download ENSAMXG00000034192's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04141	Protein processing in endoplasmic reticulum	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000034192	-	80	30.286	ENSAMXG00000012281	arl11	93	30.286
ENSAMXG00000034192	-	73	31.776	ENSAMXG00000037720	arl3	58	31.776
ENSAMXG00000034192	-	77	35.652	ENSAMXG00000006638	arl4aa	73	34.247
ENSAMXG00000034192	-	62	31.818	ENSAMXG00000043381	zgc:110197	51	31.818
ENSAMXG00000034192	-	73	34.862	ENSAMXG00000024926	arl4cb	74	32.653
ENSAMXG00000034192	-	78	32.164	ENSAMXG00000034370	-	87	32.164
ENSAMXG00000034192	-	65	35.870	ENSAMXG00000031467	arf4a	51	35.870
ENSAMXG00000034192	-	74	31.304	ENSAMXG00000042798	arfrp1	56	31.304
ENSAMXG00000034192	-	79	31.395	ENSAMXG00000004249	-	89	31.395
ENSAMXG00000034192	-	85	30.526	ENSAMXG00000035902	ARL6	96	30.526
ENSAMXG00000034192	-	73	34.951	ENSAMXG00000035742	arf2a	56	34.951
ENSAMXG00000034192	-	61	39.785	ENSAMXG00000025423	arl4ab	75	34.266
ENSAMXG00000034192	-	65	35.870	ENSAMXG00000037485	arf2b	53	35.870
ENSAMXG00000034192	-	81	30.508	ENSAMXG00000021056	arl1	91	30.508
ENSAMXG00000034192	-	68	35.052	ENSAMXG00000019845	arf1	54	35.052
ENSAMXG00000034192	-	67	31.788	ENSAMXG00000030683	arl8ba	74	31.788
ENSAMXG00000034192	-	80	92.105	ENSAMXG00000018108	sar1b	83	92.241
ENSAMXG00000034192	-	86	32.632	ENSAMXG00000024897	-	92	32.632
ENSAMXG00000034192	-	79	31.792	ENSAMXG00000038224	-	89	31.792
ENSAMXG00000034192	-	74	31.132	ENSAMXG00000018516	arl3l2	57	31.132
ENSAMXG00000034192	-	73	34.615	ENSAMXG00000011499	arl2	80	37.162
ENSAMXG00000034192	-	79	31.792	ENSAMXG00000031774	ARF5	89	31.792
ENSAMXG00000034192	-	80	85.088	ENSAMXG00000012438	tysnd1	98	82.353
ENSAMXG00000034192	-	85	30.108	ENSAMXG00000019160	arl3l1	93	30.108

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034192	-	91	91.414	ENSAPOG00000017891	-	100	91.414	Acanthochromis_polyacanthus
ENSAMXG00000034192	-	91	85.354	ENSAPOG00000007186	sar1b	100	85.354	Acanthochromis_polyacanthus
ENSAMXG00000034192	-	91	88.889	ENSACIG00000024513	-	100	88.889	Amphilophus_citrinellus
ENSAMXG00000034192	-	91	85.354	ENSACIG00000013634	sar1b	100	85.354	Amphilophus_citrinellus
ENSAMXG00000034192	-	91	91.414	ENSAOCG00000002627	-	100	91.414	Amphiprion_ocellaris
ENSAMXG00000034192	-	91	84.848	ENSAOCG00000005888	sar1b	100	84.848	Amphiprion_ocellaris
ENSAMXG00000034192	-	91	91.414	ENSAPEG00000019680	-	100	91.414	Amphiprion_percula
ENSAMXG00000034192	-	93	84.158	ENSAPEG00000022771	sar1b	100	84.848	Amphiprion_percula
ENSAMXG00000034192	-	91	85.354	ENSATEG00000012904	sar1b	100	85.354	Anabas_testudineus
ENSAMXG00000034192	-	91	89.394	ENSATEG00000023368	-	100	89.394	Anabas_testudineus
ENSAMXG00000034192	-	91	86.869	ENSACAG00000001470	-	100	86.869	Anolis_carolinensis
ENSAMXG00000034192	-	91	85.354	ENSACLG00000014649	sar1b	100	85.354	Astatotilapia_calliptera
ENSAMXG00000034192	-	91	89.394	ENSACLG00000005011	-	100	89.394	Astatotilapia_calliptera
ENSAMXG00000034192	-	95	85.990	ENSCSEG00000016976	-	100	89.394	Cynoglossus_semilaevis
ENSAMXG00000034192	-	91	79.310	ENSCSEG00000015238	sar1b	100	79.310	Cynoglossus_semilaevis
ENSAMXG00000034192	-	91	87.879	ENSCVAG00000022959	sar1b	100	87.879	Cyprinodon_variegatus
ENSAMXG00000034192	-	91	87.374	ENSDARG00000103403	sar1b	100	87.374	Danio_rerio
ENSAMXG00000034192	-	90	70.408	FBgn0038947	Sar1	99	70.408	Drosophila_melanogaster
ENSAMXG00000034192	-	88	82.292	ENSEBUG00000011723	sar1b	97	82.292	Eptatretus_burgeri
ENSAMXG00000034192	-	91	88.384	ENSELUG00000020912	sar1b	100	88.384	Esox_lucius
ENSAMXG00000034192	-	91	86.869	ENSFHEG00000019865	sar1b	100	86.869	Fundulus_heteroclitus
ENSAMXG00000034192	-	91	87.374	ENSGMOG00000008023	sar1b	100	87.374	Gadus_morhua
ENSAMXG00000034192	-	91	85.859	ENSGAFG00000007081	sar1b	100	85.859	Gambusia_affinis
ENSAMXG00000034192	-	91	84.848	ENSGACG00000001474	sar1b	100	84.848	Gasterosteus_aculeatus
ENSAMXG00000034192	-	91	85.354	ENSHBUG00000000915	sar1b	100	85.354	Haplochromis_burtoni
ENSAMXG00000034192	-	91	89.394	ENSHBUG00000018397	-	100	89.394	Haplochromis_burtoni
ENSAMXG00000034192	-	91	85.859	ENSHCOG00000010953	sar1b	100	85.859	Hippocampus_comes
ENSAMXG00000034192	-	91	92.424	ENSIPUG00000010046	sar1b	100	92.424	Ictalurus_punctatus
ENSAMXG00000034192	-	91	86.364	ENSIPUG00000020925	sar1b	100	86.364	Ictalurus_punctatus
ENSAMXG00000034192	-	91	88.384	ENSKMAG00000014875	-	100	88.384	Kryptolebias_marmoratus
ENSAMXG00000034192	-	91	85.354	ENSKMAG00000019693	sar1b	100	85.354	Kryptolebias_marmoratus
ENSAMXG00000034192	-	91	89.394	ENSLBEG00000016945	-	100	89.394	Labrus_bergylta
ENSAMXG00000034192	-	91	83.838	ENSLBEG00000027550	sar1b	100	83.838	Labrus_bergylta
ENSAMXG00000034192	-	91	68.342	ENSLACG00000017029	-	100	68.342	Latimeria_chalumnae
ENSAMXG00000034192	-	91	82.323	ENSLACG00000010795	sar1b	100	82.323	Latimeria_chalumnae
ENSAMXG00000034192	-	91	88.384	ENSLOCG00000010197	sar1b	100	88.384	Lepisosteus_oculatus
ENSAMXG00000034192	-	91	90.404	ENSLOCG00000005214	-	100	90.404	Lepisosteus_oculatus
ENSAMXG00000034192	-	98	79.907	ENSMAMG00000021732	sar1b	100	84.343	Mastacembelus_armatus
ENSAMXG00000034192	-	91	89.394	ENSMZEG00005001012	-	100	89.394	Maylandia_zebra
ENSAMXG00000034192	-	91	85.354	ENSMZEG00005008942	sar1b	100	85.354	Maylandia_zebra
ENSAMXG00000034192	-	82	87.709	ENSMGAG00000005387	-	91	87.709	Meleagris_gallopavo
ENSAMXG00000034192	-	91	90.404	ENSMMOG00000013803	-	100	90.404	Mola_mola
ENSAMXG00000034192	-	96	82.775	ENSMALG00000016635	sar1b	97	84.615	Monopterus_albus
ENSAMXG00000034192	-	91	89.899	ENSNBRG00000014004	-	100	89.899	Neolamprologus_brichardi
ENSAMXG00000034192	-	91	85.859	ENSNBRG00000008013	sar1b	100	85.859	Neolamprologus_brichardi
ENSAMXG00000034192	-	91	85.859	ENSONIG00000017278	sar1b	100	85.859	Oreochromis_niloticus
ENSAMXG00000034192	-	91	84.848	ENSORLG00000000932	sar1b	100	84.848	Oryzias_latipes
ENSAMXG00000034192	-	91	84.848	ENSORLG00020021985	sar1b	100	84.848	Oryzias_latipes_hni
ENSAMXG00000034192	-	91	84.848	ENSORLG00015007044	sar1b	100	84.848	Oryzias_latipes_hsok
ENSAMXG00000034192	-	91	84.848	ENSOMEG00000001052	sar1b	100	84.848	Oryzias_melastigma
ENSAMXG00000034192	-	91	87.374	ENSPKIG00000017353	-	100	87.374	Paramormyrops_kingsleyae
ENSAMXG00000034192	-	91	86.364	ENSPKIG00000010688	sar1b	100	86.364	Paramormyrops_kingsleyae
ENSAMXG00000034192	-	85	85.950	ENSPMGG00000001234	sar1b	95	85.950	Periophthalmus_magnuspinnatus
ENSAMXG00000034192	-	91	81.095	ENSPMAG00000003593	sar1b	100	81.095	Petromyzon_marinus
ENSAMXG00000034192	-	91	85.354	ENSPFOG00000005666	sar1b	100	85.354	Poecilia_formosa
ENSAMXG00000034192	-	80	92.982	ENSPLAG00000001016	-	77	90.833	Poecilia_latipinna
ENSAMXG00000034192	-	91	85.354	ENSPLAG00000012223	sar1b	100	85.354	Poecilia_latipinna
ENSAMXG00000034192	-	91	85.354	ENSPMEG00000016831	sar1b	100	85.354	Poecilia_mexicana
ENSAMXG00000034192	-	80	92.982	ENSPREG00000002020	-	87	91.525	Poecilia_reticulata
ENSAMXG00000034192	-	95	82.692	ENSPREG00000005312	sar1b	95	82.692	Poecilia_reticulata
ENSAMXG00000034192	-	91	85.354	ENSPNYG00000012440	sar1b	100	85.354	Pundamilia_nyererei
ENSAMXG00000034192	-	91	88.889	ENSPNYG00000021357	-	100	88.889	Pundamilia_nyererei
ENSAMXG00000034192	-	91	97.980	ENSPNAG00000001123	-	100	97.980	Pygocentrus_nattereri
ENSAMXG00000034192	-	91	87.879	ENSPNAG00000014683	sar1b	100	87.879	Pygocentrus_nattereri
ENSAMXG00000034192	-	91	86.869	ENSSFOG00015018128	-	100	86.869	Scleropages_formosus
ENSAMXG00000034192	-	91	88.384	ENSSFOG00015020051	sar1b	100	88.384	Scleropages_formosus
ENSAMXG00000034192	-	98	80.841	ENSSMAG00000007106	sar1b	86	80.841	Scophthalmus_maximus
ENSAMXG00000034192	-	96	86.190	ENSSMAG00000002165	-	100	88.889	Scophthalmus_maximus
ENSAMXG00000034192	-	91	85.859	ENSSDUG00000020926	sar1b	100	85.859	Seriola_dumerili
ENSAMXG00000034192	-	91	90.404	ENSSDUG00000019629	-	100	90.404	Seriola_dumerili
ENSAMXG00000034192	-	91	85.859	ENSSLDG00000017052	sar1b	100	85.859	Seriola_lalandi_dorsalis
ENSAMXG00000034192	-	91	90.404	ENSSLDG00000024197	-	100	90.404	Seriola_lalandi_dorsalis
ENSAMXG00000034192	-	91	85.859	ENSSPUG00000010247	-	100	85.859	Sphenodon_punctatus
ENSAMXG00000034192	-	91	85.859	ENSSPAG00000017634	sar1b	100	85.859	Stegastes_partitus
ENSAMXG00000034192	-	91	90.404	ENSSPAG00000015626	-	100	90.404	Stegastes_partitus
ENSAMXG00000034192	-	91	81.818	ENSTRUG00000023908	sar1b	100	81.818	Takifugu_rubripes
ENSAMXG00000034192	-	91	84.343	ENSTNIG00000016097	sar1b	100	84.343	Tetraodon_nigroviridis
ENSAMXG00000034192	-	82	86.517	ENSXCOG00000004160	sar1b	87	86.517	Xiphophorus_couchianus
ENSAMXG00000034192	-	80	92.982	ENSXCOG00000006154	-	85	86.614	Xiphophorus_couchianus
ENSAMXG00000034192	-	91	85.859	ENSXMAG00000008294	sar1b	100	85.859	Xiphophorus_maculatus