EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000034221 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 3789 bases
Position: chr14:3686671-3690459
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000047906	RVT_1	PF00078.27	4.5e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000042073	-	3789	-	ENSAMXP00000047906	1262 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000034221's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034221's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000034221	-	69	35.240	ENSAMXG00000042337	-	98	35.240
ENSAMXG00000034221	-	79	32.941	ENSAMXG00000036080	-	88	32.941
ENSAMXG00000034221	-	95	30.947	ENSAMXG00000037256	-	96	30.947
ENSAMXG00000034221	-	67	34.747	ENSAMXG00000040121	-	99	34.629
ENSAMXG00000034221	-	65	51.217	ENSAMXG00000033587	-	99	51.217
ENSAMXG00000034221	-	99	47.456	ENSAMXG00000031230	-	99	47.456
ENSAMXG00000034221	-	95	31.489	ENSAMXG00000036146	-	95	31.489
ENSAMXG00000034221	-	64	33.578	ENSAMXG00000036752	-	99	33.578
ENSAMXG00000034221	-	79	46.446	ENSAMXG00000037218	-	99	46.446
ENSAMXG00000034221	-	99	33.150	ENSAMXG00000042761	-	99	33.150
ENSAMXG00000034221	-	79	34.232	ENSAMXG00000041150	-	95	34.232

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034221	-	95	30.966	ENSAOCG00000008973	-	83	30.966	Amphiprion_ocellaris
ENSAMXG00000034221	-	98	39.343	ENSAPEG00000012642	-	99	39.343	Amphiprion_percula
ENSAMXG00000034221	-	89	31.028	ENSACLG00000018177	-	98	31.028	Astatotilapia_calliptera
ENSAMXG00000034221	-	85	49.860	ENSACLG00000026023	-	99	49.860	Astatotilapia_calliptera
ENSAMXG00000034221	-	97	32.661	ENSACLG00000014673	-	97	32.661	Astatotilapia_calliptera
ENSAMXG00000034221	-	99	62.080	ENSACLG00000023850	-	99	62.080	Astatotilapia_calliptera
ENSAMXG00000034221	-	65	47.768	ENSACLG00000027045	-	99	47.768	Astatotilapia_calliptera
ENSAMXG00000034221	-	98	44.641	ENSACLG00000012298	-	99	44.756	Astatotilapia_calliptera
ENSAMXG00000034221	-	92	31.601	ENSKMAG00000002601	-	94	31.601	Kryptolebias_marmoratus
ENSAMXG00000034221	-	99	47.771	ENSKMAG00000020345	-	99	47.771	Kryptolebias_marmoratus
ENSAMXG00000034221	-	91	37.329	ENSKMAG00000006598	-	99	37.414	Kryptolebias_marmoratus
ENSAMXG00000034221	-	78	31.017	ENSKMAG00000006893	-	99	31.017	Kryptolebias_marmoratus
ENSAMXG00000034221	-	99	30.672	ENSKMAG00000013004	-	98	30.672	Kryptolebias_marmoratus
ENSAMXG00000034221	-	99	48.284	ENSKMAG00000014428	-	99	48.284	Kryptolebias_marmoratus
ENSAMXG00000034221	-	91	33.998	ENSKMAG00000007098	-	90	34.172	Kryptolebias_marmoratus
ENSAMXG00000034221	-	99	43.840	ENSKMAG00000018279	-	99	43.840	Kryptolebias_marmoratus
ENSAMXG00000034221	-	60	31.593	ENSLBEG00000017877	-	95	31.593	Labrus_bergylta
ENSAMXG00000034221	-	79	53.119	ENSMZEG00005001544	-	99	53.119	Maylandia_zebra
ENSAMXG00000034221	-	59	34.334	ENSMZEG00005013632	-	99	35.085	Maylandia_zebra
ENSAMXG00000034221	-	53	47.033	ENSONIG00000020880	-	99	47.033	Oreochromis_niloticus
ENSAMXG00000034221	-	71	46.563	ENSONIG00000020778	-	99	46.563	Oreochromis_niloticus
ENSAMXG00000034221	-	60	33.808	ENSORLG00000023193	-	90	33.808	Oryzias_latipes
ENSAMXG00000034221	-	99	46.603	ENSORLG00000029419	-	99	46.603	Oryzias_latipes
ENSAMXG00000034221	-	97	32.109	ENSORLG00000025420	-	98	32.109	Oryzias_latipes
ENSAMXG00000034221	-	97	32.109	ENSORLG00000026691	-	98	32.109	Oryzias_latipes
ENSAMXG00000034221	-	99	45.847	ENSORLG00000024310	-	99	45.847	Oryzias_latipes
ENSAMXG00000034221	-	97	32.109	ENSORLG00000029798	-	98	32.109	Oryzias_latipes
ENSAMXG00000034221	-	98	31.255	ENSORLG00020008142	-	98	31.230	Oryzias_latipes_hni
ENSAMXG00000034221	-	60	45.729	ENSORLG00020003581	-	94	45.729	Oryzias_latipes_hni
ENSAMXG00000034221	-	99	45.303	ENSORLG00020000561	-	99	45.303	Oryzias_latipes_hni
ENSAMXG00000034221	-	97	32.177	ENSORLG00020020951	-	97	32.177	Oryzias_latipes_hni
ENSAMXG00000034221	-	70	45.383	ENSORLG00020016539	-	99	45.383	Oryzias_latipes_hni
ENSAMXG00000034221	-	99	45.223	ENSORLG00015013713	-	99	45.223	Oryzias_latipes_hsok
ENSAMXG00000034221	-	99	31.284	ENSORLG00015002129	-	98	31.284	Oryzias_latipes_hsok
ENSAMXG00000034221	-	97	46.531	ENSORLG00015002592	-	96	46.283	Oryzias_latipes_hsok
ENSAMXG00000034221	-	62	47.782	ENSOMEG00000006131	-	99	47.782	Oryzias_melastigma
ENSAMXG00000034221	-	79	31.501	ENSOMEG00000021560	-	97	31.501	Oryzias_melastigma
ENSAMXG00000034221	-	74	33.688	ENSPFOG00000021895	-	96	33.688	Poecilia_formosa
ENSAMXG00000034221	-	98	37.138	ENSPREG00000018911	-	97	37.299	Poecilia_reticulata
ENSAMXG00000034221	-	98	56.694	ENSPREG00000005522	-	99	56.694	Poecilia_reticulata
ENSAMXG00000034221	-	71	34.525	ENSSLDG00000010601	-	84	34.671	Seriola_lalandi_dorsalis
ENSAMXG00000034221	-	71	30.744	ENSXETG00000034016	-	93	30.744	Xenopus_tropicalis
ENSAMXG00000034221	-	94	47.297	ENSXMAG00000028274	-	99	47.297	Xiphophorus_maculatus
ENSAMXG00000034221	-	93	32.101	ENSXMAG00000027558	-	95	32.101	Xiphophorus_maculatus
ENSAMXG00000034221	-	66	32.426	ENSXMAG00000023805	-	99	32.426	Xiphophorus_maculatus
ENSAMXG00000034221	-	68	44.145	ENSXMAG00000024492	-	99	44.145	Xiphophorus_maculatus
ENSAMXG00000034221	-	66	43.728	ENSXMAG00000021762	-	96	43.728	Xiphophorus_maculatus
ENSAMXG00000034221	-	97	32.391	ENSXMAG00000027070	-	96	32.391	Xiphophorus_maculatus