EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000034227 (Gene tree)
Gene ID: 111193225
Gene Symbol: rab32b
Alias: -
Full Name: ras-related protein Rab-32-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10170 bases
Position: chr9:24404276-24414445
Accession: 111193225
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045544	MMR_HSR1	PF01926.23	5.1e-05	1	1
ENSAMXP00000027346	MMR_HSR1	PF01926.23	5.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040265	-	910	XM_022672987	ENSAMXP00000045544	211 (aa)	XP_022528708	UPI000BBD7B70
ENSAMXT00000042893	-	630	-	ENSAMXP00000027346	209 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000034227's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034227's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000034227	rab32b	59	30.894	ENSAMXG00000003717	rab39bb	56	30.894
ENSAMXG00000034227	rab32b	89	36.842	ENSAMXG00000031957	zgc:100918	90	36.842
ENSAMXG00000034227	rab32b	80	32.948	ENSAMXG00000009640	rab14	78	32.948
ENSAMXG00000034227	rab32b	58	33.871	ENSAMXG00000036179	rab5aa	54	33.871
ENSAMXG00000034227	rab32b	64	33.582	ENSAMXG00000033216	rab41	65	33.582
ENSAMXG00000034227	rab32b	80	32.370	ENSAMXG00000040126	-	61	32.370
ENSAMXG00000034227	rab32b	58	33.065	ENSAMXG00000037267	-	55	33.065
ENSAMXG00000034227	rab32b	82	33.140	ENSAMXG00000026476	rab9b	76	33.140
ENSAMXG00000034227	rab32b	81	34.104	ENSAMXG00000040604	-	98	31.220
ENSAMXG00000034227	rab32b	80	34.118	ENSAMXG00000043951	rab15	77	34.118
ENSAMXG00000034227	rab32b	99	32.751	ENSAMXG00000039737	RAB19	99	32.751
ENSAMXG00000034227	rab32b	95	30.198	ENSAMXG00000032564	rab1ab	97	30.198
ENSAMXG00000034227	rab32b	94	36.000	ENSAMXG00000030712	rab13	96	36.000
ENSAMXG00000034227	rab32b	88	31.746	ENSAMXG00000032027	rab7a	89	31.746
ENSAMXG00000034227	rab32b	81	38.953	ENSAMXG00000037623	-	74	38.953
ENSAMXG00000034227	rab32b	85	35.519	ENSAMXG00000002254	-	89	31.746
ENSAMXG00000034227	rab32b	82	33.146	ENSAMXG00000036772	rab2a	80	33.146
ENSAMXG00000034227	rab32b	96	31.628	ENSAMXG00000032663	si:dkey-13a21.4	95	31.628
ENSAMXG00000034227	rab32b	81	38.953	ENSAMXG00000042655	rab11bb	74	38.953
ENSAMXG00000034227	rab32b	74	31.646	ENSAMXG00000014960	rab23	76	32.727
ENSAMXG00000034227	rab32b	73	30.323	ENSAMXG00000042419	rab3c	68	30.323
ENSAMXG00000034227	rab32b	58	39.024	ENSAMXG00000040286	rab33ba	50	39.024
ENSAMXG00000034227	rab32b	80	35.294	ENSAMXG00000042073	rab18b	79	35.294
ENSAMXG00000034227	rab32b	58	34.711	ENSAMXG00000035919	rab5ab	53	34.711
ENSAMXG00000034227	rab32b	85	31.694	ENSAMXG00000033470	RAB15	81	31.694
ENSAMXG00000034227	rab32b	59	34.677	ENSAMXG00000013054	rab22a	60	34.677
ENSAMXG00000034227	rab32b	59	36.290	ENSAMXG00000039486	zgc:171927	57	36.290
ENSAMXG00000034227	rab32b	59	37.097	ENSAMXG00000034850	-	59	37.097
ENSAMXG00000034227	rab32b	76	30.675	ENSAMXG00000009935	rab30	63	30.675
ENSAMXG00000034227	rab32b	75	30.380	ENSAMXG00000043717	rab5c	52	34.711
ENSAMXG00000034227	rab32b	59	37.903	ENSAMXG00000003547	rab1ba	54	37.903
ENSAMXG00000034227	rab32b	58	34.711	ENSAMXG00000032547	rab6a	56	34.711
ENSAMXG00000034227	rab32b	74	37.267	ENSAMXG00000024632	rab11al	73	37.267
ENSAMXG00000034227	rab32b	82	34.483	ENSAMXG00000026059	RAB9A	86	34.659
ENSAMXG00000034227	rab32b	94	50.500	ENSAMXG00000036330	RAB38	92	50.500
ENSAMXG00000034227	rab32b	80	37.278	ENSAMXG00000029712	rab25b	77	37.278
ENSAMXG00000034227	rab32b	76	36.646	ENSAMXG00000040879	rab25a	72	36.646
ENSAMXG00000034227	rab32b	65	35.294	ENSAMXG00000040460	zgc:101559	54	35.294
ENSAMXG00000034227	rab32b	90	30.052	ENSAMXG00000004630	rab6ba	88	30.052
ENSAMXG00000034227	rab32b	85	32.778	ENSAMXG00000039865	rab35b	98	31.034
ENSAMXG00000034227	rab32b	88	36.022	ENSAMXG00000003155	rab11a	83	36.022
ENSAMXG00000034227	rab32b	62	35.878	ENSAMXG00000037428	-	60	35.878
ENSAMXG00000034227	rab32b	94	32.000	ENSAMXG00000025889	RAB9A	97	32.000
ENSAMXG00000034227	rab32b	89	32.632	ENSAMXG00000038243	si:dkey-16l2.16	87	38.182
ENSAMXG00000034227	rab32b	82	32.759	ENSAMXG00000004882	rab12	78	30.653

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034227	rab32b	91	54.639	ENSACLG00000003898	rab32b	89	54.639	Astatotilapia_calliptera
ENSAMXG00000034227	rab32b	90	54.497	ENSGACG00000011607	rab32b	85	54.497	Gasterosteus_aculeatus
ENSAMXG00000034227	rab32b	91	54.639	ENSHBUG00000013010	rab32b	89	54.639	Haplochromis_burtoni
ENSAMXG00000034227	rab32b	99	46.698	ENSLBEG00000005018	rab32b	99	46.698	Labrus_bergylta
ENSAMXG00000034227	rab32b	92	52.551	ENSMAMG00000000238	rab32b	96	47.368	Mastacembelus_armatus
ENSAMXG00000034227	rab32b	91	54.639	ENSMZEG00005013124	rab32b	89	54.639	Maylandia_zebra
ENSAMXG00000034227	rab32b	91	55.155	ENSNBRG00000007544	rab32b	89	55.155	Neolamprologus_brichardi
ENSAMXG00000034227	rab32b	91	55.155	ENSPNYG00000008014	rab32b	89	55.155	Pundamilia_nyererei