EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000034262 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2333 bases
Position: chrAPWO02002343.1:62708-65040
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000034376	RVT_1	PF00078.27	3.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055320	-	1146	-	ENSAMXP00000034376	381 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000034262's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034262's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000034262	-	66	40.310	ENSAMXG00000041059	-	96	40.310
ENSAMXG00000034262	-	56	50.000	ENSAMXG00000031846	-	61	50.000
ENSAMXG00000034262	-	93	45.810	ENSAMXG00000040774	-	96	45.810

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034262	-	58	31.878	ENSKMAG00000014455	-	88	31.878	Kryptolebias_marmoratus
ENSAMXG00000034262	-	54	31.674	ENSPFOG00000024165	-	50	31.674	Poecilia_formosa
ENSAMXG00000034262	-	68	30.741	ENSPREG00000004798	-	92	30.741	Poecilia_reticulata
ENSAMXG00000034262	-	69	46.970	ENSPNAG00000010544	-	88	46.970	Pygocentrus_nattereri
ENSAMXG00000034262	-	56	30.085	ENSXETG00000030237	-	86	30.085	Xenopus_tropicalis
ENSAMXG00000034262	-	55	30.909	ENSXMAG00000026828	-	82	30.909	Xiphophorus_maculatus