EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000034279 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 6306 bases
Position: chrAPWO02000505.1:30394-36699
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000041881	Exo_endo_phos	PF03372.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057625	-	1653	-	ENSAMXP00000041881	550 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000034279's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000034279	-	69	31.017	ENSAMXG00000029153	-	80	31.017
ENSAMXG00000034279	-	80	95.227	ENSAMXG00000035618	-	96	95.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034279	-	53	32.013	ENSAPOG00000018624	-	51	32.013	Acanthochromis_polyacanthus
ENSAMXG00000034279	-	66	32.292	ENSACLG00000004686	-	90	32.292	Astatotilapia_calliptera
ENSAMXG00000034279	-	55	59.076	ENSIPUG00000013055	-	60	59.076	Ictalurus_punctatus
ENSAMXG00000034279	-	73	53.846	ENSIPUG00000012540	-	87	53.846	Ictalurus_punctatus
ENSAMXG00000034279	-	66	31.915	ENSLACG00000004055	-	53	31.915	Latimeria_chalumnae
ENSAMXG00000034279	-	54	56.902	ENSSFOG00015018010	-	59	56.902	Scleropages_formosus