EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000034405 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4331 bases
Position: chr7:28258195-28262525
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000037218	MMR_HSR1	PF01926.23	2.2e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000032172	-	432	-	ENSAMXP00000037218	143 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000034405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000034405	-	87	42.063	ENSAMXG00000033374	-	84	42.063
ENSAMXG00000034405	-	78	54.955	ENSAMXG00000038457	-	51	53.271
ENSAMXG00000034405	-	78	51.351	ENSAMXG00000042243	-	54	51.351
ENSAMXG00000034405	-	80	40.179	ENSAMXG00000019109	-	54	40.179
ENSAMXG00000034405	-	78	32.743	ENSAMXG00000031086	-	51	32.743
ENSAMXG00000034405	-	85	63.934	ENSAMXG00000038580	-	52	63.934
ENSAMXG00000034405	-	78	48.649	ENSAMXG00000043950	-	54	48.649
ENSAMXG00000034405	-	78	50.000	ENSAMXG00000029911	-	71	50.000
ENSAMXG00000034405	-	78	63.717	ENSAMXG00000042475	-	70	63.717
ENSAMXG00000034405	-	75	48.148	ENSAMXG00000042848	-	53	48.148
ENSAMXG00000034405	-	71	37.255	ENSAMXG00000031683	-	58	37.255
ENSAMXG00000034405	-	78	52.212	ENSAMXG00000030826	-	55	52.212
ENSAMXG00000034405	-	63	33.333	ENSAMXG00000035821	-	89	33.333
ENSAMXG00000034405	-	83	45.763	ENSAMXG00000031676	-	69	45.763
ENSAMXG00000034405	-	73	35.514	ENSAMXG00000009216	-	50	35.514
ENSAMXG00000034405	-	81	52.679	ENSAMXG00000002562	-	76	54.545
ENSAMXG00000034405	-	84	45.968	ENSAMXG00000037755	-	65	45.968
ENSAMXG00000034405	-	83	53.211	ENSAMXG00000038070	-	55	53.211
ENSAMXG00000034405	-	59	54.762	ENSAMXG00000032139	-	71	54.762
ENSAMXG00000034405	-	85	50.000	ENSAMXG00000038694	-	81	50.000
ENSAMXG00000034405	-	97	52.101	ENSAMXG00000037741	-	53	52.101
ENSAMXG00000034405	-	79	39.823	ENSAMXG00000036272	-	53	39.091
ENSAMXG00000034405	-	78	50.893	ENSAMXG00000041888	-	54	50.893
ENSAMXG00000034405	-	83	76.471	ENSAMXG00000039994	-	50	76.471
ENSAMXG00000034405	-	85	51.754	ENSAMXG00000036317	-	53	51.754
ENSAMXG00000034405	-	81	53.333	ENSAMXG00000037339	-	83	53.333
ENSAMXG00000034405	-	92	44.697	ENSAMXG00000043046	-	58	48.485
ENSAMXG00000034405	-	86	73.387	ENSAMXG00000041745	-	57	73.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034405	-	84	53.333	ENSAPOG00000018915	-	52	53.333	Acanthochromis_polyacanthus
ENSAMXG00000034405	-	81	54.310	ENSAPOG00000001075	-	53	54.310	Acanthochromis_polyacanthus
ENSAMXG00000034405	-	76	54.128	ENSAPOG00000007631	-	51	54.128	Acanthochromis_polyacanthus
ENSAMXG00000034405	-	76	40.179	ENSAPOG00000008819	-	50	40.179	Acanthochromis_polyacanthus
ENSAMXG00000034405	-	83	50.420	ENSAPOG00000009059	-	62	50.420	Acanthochromis_polyacanthus
ENSAMXG00000034405	-	85	54.545	ENSAPOG00000022321	-	53	54.545	Acanthochromis_polyacanthus
ENSAMXG00000034405	-	90	53.906	ENSACIG00000012761	-	55	53.906	Amphilophus_citrinellus
ENSAMXG00000034405	-	89	48.819	ENSACIG00000022374	-	64	48.819	Amphilophus_citrinellus
ENSAMXG00000034405	-	82	37.795	ENSACIG00000014737	-	59	37.795	Amphilophus_citrinellus
ENSAMXG00000034405	-	78	36.134	ENSACIG00000014730	zgc:172131	61	36.134	Amphilophus_citrinellus
ENSAMXG00000034405	-	76	42.593	ENSACIG00000019509	-	50	42.593	Amphilophus_citrinellus
ENSAMXG00000034405	-	83	53.782	ENSACIG00000012204	-	51	53.782	Amphilophus_citrinellus
ENSAMXG00000034405	-	74	38.679	ENSAPEG00000013532	-	54	38.679	Amphiprion_percula
ENSAMXG00000034405	-	82	55.085	ENSAPEG00000021653	si:dkey-73p2.1	76	58.333	Amphiprion_percula
ENSAMXG00000034405	-	85	46.774	ENSAPEG00000003513	-	86	46.774	Amphiprion_percula
ENSAMXG00000034405	-	83	54.237	ENSATEG00000011978	-	59	54.237	Anabas_testudineus
ENSAMXG00000034405	-	79	53.097	ENSATEG00000011979	-	53	53.097	Anabas_testudineus
ENSAMXG00000034405	-	83	45.763	ENSATEG00000011771	-	65	45.763	Anabas_testudineus
ENSAMXG00000034405	-	80	53.913	ENSATEG00000011891	-	72	53.913	Anabas_testudineus
ENSAMXG00000034405	-	80	39.474	ENSACLG00000011585	-	55	39.474	Astatotilapia_calliptera
ENSAMXG00000034405	-	83	51.695	ENSACLG00000005232	-	60	51.695	Astatotilapia_calliptera
ENSAMXG00000034405	-	83	52.542	ENSACLG00000005319	-	54	52.542	Astatotilapia_calliptera
ENSAMXG00000034405	-	81	45.690	ENSCSEG00000001223	-	50	45.378	Cynoglossus_semilaevis
ENSAMXG00000034405	-	78	44.144	ENSCSEG00000001225	si:ch211-113e8.6	76	44.144	Cynoglossus_semilaevis
ENSAMXG00000034405	-	83	50.847	ENSCVAG00000018876	-	54	50.847	Cyprinodon_variegatus
ENSAMXG00000034405	-	79	52.727	ENSCVAG00000011321	-	50	52.727	Cyprinodon_variegatus
ENSAMXG00000034405	-	81	47.414	ENSCVAG00000007737	-	52	47.414	Cyprinodon_variegatus
ENSAMXG00000034405	-	83	50.420	ENSCVAG00000018895	-	55	50.420	Cyprinodon_variegatus
ENSAMXG00000034405	-	87	48.387	ENSCVAG00000003277	-	57	48.387	Cyprinodon_variegatus
ENSAMXG00000034405	-	83	46.218	ENSCVAG00000018769	-	52	46.218	Cyprinodon_variegatus
ENSAMXG00000034405	-	76	50.459	ENSDARG00000035088	si:ch211-254c8.3	51	47.748	Danio_rerio
ENSAMXG00000034405	-	74	42.453	ENSDARG00000052899	CU550714.1	51	42.453	Danio_rerio
ENSAMXG00000034405	-	77	42.727	ENSDARG00000074610	si:ch211-113e8.6	78	42.727	Danio_rerio
ENSAMXG00000034405	-	79	47.009	ENSDARG00000088906	CABZ01059403.1	58	47.009	Danio_rerio
ENSAMXG00000034405	-	82	47.863	ENSFHEG00000008610	-	54	47.863	Fundulus_heteroclitus
ENSAMXG00000034405	-	91	39.716	ENSGACG00000018970	-	56	39.716	Gasterosteus_aculeatus
ENSAMXG00000034405	-	60	48.837	ENSHBUG00000000685	-	61	48.837	Haplochromis_burtoni
ENSAMXG00000034405	-	83	42.202	ENSIPUG00000000899	-	51	42.202	Ictalurus_punctatus
ENSAMXG00000034405	-	76	44.954	ENSIPUG00000000911	-	54	44.954	Ictalurus_punctatus
ENSAMXG00000034405	-	61	48.276	ENSIPUG00000007177	-	68	48.276	Ictalurus_punctatus
ENSAMXG00000034405	-	75	44.444	ENSIPUG00000000074	-	62	43.519	Ictalurus_punctatus
ENSAMXG00000034405	-	82	52.586	ENSKMAG00000004621	-	56	52.586	Kryptolebias_marmoratus
ENSAMXG00000034405	-	85	51.240	ENSKMAG00000010997	-	64	51.240	Kryptolebias_marmoratus
ENSAMXG00000034405	-	83	52.542	ENSLBEG00000017905	-	52	52.542	Labrus_bergylta
ENSAMXG00000034405	-	83	35.398	ENSLBEG00000022492	-	54	35.398	Labrus_bergylta
ENSAMXG00000034405	-	85	51.240	ENSLBEG00000017965	-	66	54.472	Labrus_bergylta
ENSAMXG00000034405	-	83	53.390	ENSLBEG00000009529	-	50	53.390	Labrus_bergylta
ENSAMXG00000034405	-	83	53.390	ENSLBEG00000010225	-	52	53.390	Labrus_bergylta
ENSAMXG00000034405	-	84	49.167	ENSLBEG00000013074	-	50	49.167	Labrus_bergylta
ENSAMXG00000034405	-	85	50.413	ENSLBEG00000017980	-	76	50.413	Labrus_bergylta
ENSAMXG00000034405	-	85	55.372	ENSLBEG00000022860	-	50	55.372	Labrus_bergylta
ENSAMXG00000034405	-	78	44.444	ENSLOCG00000011098	-	50	44.444	Lepisosteus_oculatus
ENSAMXG00000034405	-	77	41.441	ENSLOCG00000011904	-	55	41.441	Lepisosteus_oculatus
ENSAMXG00000034405	-	82	55.172	ENSLOCG00000011749	-	52	55.172	Lepisosteus_oculatus
ENSAMXG00000034405	-	85	48.387	ENSLOCG00000013437	-	51	48.387	Lepisosteus_oculatus
ENSAMXG00000034405	-	78	52.778	ENSLOCG00000011879	-	53	52.778	Lepisosteus_oculatus
ENSAMXG00000034405	-	79	41.026	ENSLOCG00000011913	-	59	41.026	Lepisosteus_oculatus
ENSAMXG00000034405	-	82	53.846	ENSMAMG00000012570	-	70	54.386	Mastacembelus_armatus
ENSAMXG00000034405	-	87	52.800	ENSMZEG00005020762	-	50	52.800	Maylandia_zebra
ENSAMXG00000034405	-	84	35.000	ENSMZEG00005020553	-	50	35.000	Maylandia_zebra
ENSAMXG00000034405	-	78	37.838	ENSMZEG00005020531	-	55	37.838	Maylandia_zebra
ENSAMXG00000034405	-	81	52.586	ENSMZEG00005001615	-	50	52.586	Maylandia_zebra
ENSAMXG00000034405	-	80	54.386	ENSMZEG00005001649	-	52	54.386	Maylandia_zebra
ENSAMXG00000034405	-	81	52.586	ENSMZEG00005015087	-	50	52.586	Maylandia_zebra
ENSAMXG00000034405	-	83	52.941	ENSMZEG00005020218	-	50	52.941	Maylandia_zebra
ENSAMXG00000034405	-	83	51.261	ENSMZEG00005027842	-	65	51.261	Maylandia_zebra
ENSAMXG00000034405	-	81	33.884	ENSMZEG00005027522	-	61	33.884	Maylandia_zebra
ENSAMXG00000034405	-	76	37.838	ENSNBRG00000020578	-	54	37.838	Neolamprologus_brichardi
ENSAMXG00000034405	-	85	35.878	ENSNBRG00000003517	-	52	35.878	Neolamprologus_brichardi
ENSAMXG00000034405	-	74	44.444	ENSNBRG00000002144	-	51	44.444	Neolamprologus_brichardi
ENSAMXG00000034405	-	80	46.491	ENSNBRG00000024251	-	53	46.491	Neolamprologus_brichardi
ENSAMXG00000034405	-	80	48.246	ENSNBRG00000014279	-	50	48.246	Neolamprologus_brichardi
ENSAMXG00000034405	-	87	53.226	ENSNBRG00000023276	-	80	53.226	Neolamprologus_brichardi
ENSAMXG00000034405	-	73	48.077	ENSNBRG00000009535	si:ch211-113e8.6	98	48.077	Neolamprologus_brichardi
ENSAMXG00000034405	-	75	40.000	ENSONIG00000021445	-	53	40.000	Oreochromis_niloticus
ENSAMXG00000034405	-	78	54.630	ENSONIG00000009177	-	53	54.630	Oreochromis_niloticus
ENSAMXG00000034405	-	87	53.448	ENSONIG00000005491	-	53	53.448	Oreochromis_niloticus
ENSAMXG00000034405	-	75	39.252	ENSONIG00000017884	-	57	39.252	Oreochromis_niloticus
ENSAMXG00000034405	-	85	49.587	ENSONIG00000016497	-	50	49.587	Oreochromis_niloticus
ENSAMXG00000034405	-	83	31.298	ENSONIG00000020856	-	59	31.298	Oreochromis_niloticus
ENSAMXG00000034405	-	88	51.282	ENSONIG00000000243	-	51	51.282	Oreochromis_niloticus
ENSAMXG00000034405	-	85	34.454	ENSONIG00000012661	-	55	34.454	Oreochromis_niloticus
ENSAMXG00000034405	-	86	36.842	ENSONIG00000012666	-	61	36.842	Oreochromis_niloticus
ENSAMXG00000034405	-	80	40.351	ENSONIG00000005037	-	50	40.351	Oreochromis_niloticus
ENSAMXG00000034405	-	81	53.448	ENSONIG00000012313	-	50	52.174	Oreochromis_niloticus
ENSAMXG00000034405	-	76	43.636	ENSONIG00000009343	-	53	42.975	Oreochromis_niloticus
ENSAMXG00000034405	-	86	44.545	ENSORLG00000026065	-	51	44.545	Oryzias_latipes
ENSAMXG00000034405	-	83	50.847	ENSORLG00020015638	si:ch73-285p12.4	51	50.877	Oryzias_latipes_hni
ENSAMXG00000034405	-	78	40.179	ENSORLG00020017350	-	50	40.179	Oryzias_latipes_hni
ENSAMXG00000034405	-	74	41.509	ENSORLG00015018237	-	70	41.509	Oryzias_latipes_hsok
ENSAMXG00000034405	-	78	40.541	ENSORLG00015018187	-	65	40.541	Oryzias_latipes_hsok
ENSAMXG00000034405	-	81	45.763	ENSOMEG00000018427	-	52	45.763	Oryzias_melastigma
ENSAMXG00000034405	-	74	44.340	ENSOMEG00000018354	-	54	44.340	Oryzias_melastigma
ENSAMXG00000034405	-	72	45.631	ENSPKIG00000014014	zgc:172131	53	45.631	Paramormyrops_kingsleyae
ENSAMXG00000034405	-	74	43.925	ENSPMGG00000008403	-	74	43.925	Periophthalmus_magnuspinnatus
ENSAMXG00000034405	-	72	51.456	ENSPMGG00000009271	-	75	51.456	Periophthalmus_magnuspinnatus
ENSAMXG00000034405	-	83	49.580	ENSPMGG00000016895	-	50	49.580	Periophthalmus_magnuspinnatus
ENSAMXG00000034405	-	79	52.212	ENSPMGG00000001115	-	60	52.212	Periophthalmus_magnuspinnatus
ENSAMXG00000034405	-	82	53.846	ENSPMGG00000008073	-	60	58.095	Periophthalmus_magnuspinnatus
ENSAMXG00000034405	-	64	47.253	ENSPMGG00000013552	-	84	47.253	Periophthalmus_magnuspinnatus
ENSAMXG00000034405	-	83	50.420	ENSPMGG00000001625	-	55	50.420	Periophthalmus_magnuspinnatus
ENSAMXG00000034405	-	74	38.776	ENSPFOG00000018914	-	55	37.037	Poecilia_formosa
ENSAMXG00000034405	-	80	43.860	ENSPFOG00000001711	-	53	43.860	Poecilia_formosa
ENSAMXG00000034405	-	83	49.565	ENSPFOG00000023369	-	51	49.565	Poecilia_formosa
ENSAMXG00000034405	-	73	41.346	ENSPFOG00000004636	-	50	41.346	Poecilia_formosa
ENSAMXG00000034405	-	83	55.556	ENSPLAG00000010015	-	51	55.556	Poecilia_latipinna
ENSAMXG00000034405	-	78	49.558	ENSPMEG00000014325	-	57	49.558	Poecilia_mexicana
ENSAMXG00000034405	-	65	45.161	ENSPMEG00000021963	-	73	45.161	Poecilia_mexicana
ENSAMXG00000034405	-	71	50.495	ENSPMEG00000019710	-	53	50.495	Poecilia_mexicana
ENSAMXG00000034405	-	83	47.458	ENSPREG00000015263	-	53	50.909	Poecilia_reticulata
ENSAMXG00000034405	-	76	44.037	ENSPREG00000003230	-	50	44.037	Poecilia_reticulata
ENSAMXG00000034405	-	76	43.519	ENSPREG00000005902	-	52	43.519	Poecilia_reticulata
ENSAMXG00000034405	-	82	49.573	ENSPREG00000017019	-	55	49.573	Poecilia_reticulata
ENSAMXG00000034405	-	73	40.385	ENSPREG00000010694	-	51	40.385	Poecilia_reticulata
ENSAMXG00000034405	-	87	48.872	ENSPNYG00000004146	-	73	48.872	Pundamilia_nyererei
ENSAMXG00000034405	-	76	41.284	ENSPNYG00000021131	-	55	41.284	Pundamilia_nyererei
ENSAMXG00000034405	-	85	39.370	ENSPNAG00000008969	-	61	39.370	Pygocentrus_nattereri
ENSAMXG00000034405	-	84	40.833	ENSPNAG00000008976	-	60	40.833	Pygocentrus_nattereri
ENSAMXG00000034405	-	78	45.536	ENSSFOG00015007874	-	52	45.536	Scleropages_formosus
ENSAMXG00000034405	-	83	56.780	ENSSDUG00000004973	-	52	56.780	Seriola_dumerili
ENSAMXG00000034405	-	85	50.000	ENSSDUG00000020733	-	53	50.000	Seriola_dumerili
ENSAMXG00000034405	-	85	49.194	ENSSLDG00000009117	-	62	49.194	Seriola_lalandi_dorsalis
ENSAMXG00000034405	-	73	46.667	ENSSLDG00000005616	-	51	46.667	Seriola_lalandi_dorsalis
ENSAMXG00000034405	-	87	53.543	ENSSLDG00000024641	-	65	53.543	Seriola_lalandi_dorsalis
ENSAMXG00000034405	-	81	57.627	ENSSLDG00000006746	-	52	54.237	Seriola_lalandi_dorsalis
ENSAMXG00000034405	-	81	52.542	ENSSPAG00000013831	-	77	52.542	Stegastes_partitus
ENSAMXG00000034405	-	78	33.333	ENSSPAG00000012885	-	57	33.333	Stegastes_partitus
ENSAMXG00000034405	-	82	51.282	ENSSPAG00000002563	-	73	52.174	Stegastes_partitus
ENSAMXG00000034405	-	76	44.037	ENSSPAG00000020351	-	54	44.037	Stegastes_partitus
ENSAMXG00000034405	-	83	47.934	ENSSPAG00000019136	-	55	47.934	Stegastes_partitus
ENSAMXG00000034405	-	76	60.185	ENSSPAG00000016454	-	55	60.185	Stegastes_partitus
ENSAMXG00000034405	-	77	45.455	ENSTNIG00000001262	-	51	45.455	Tetraodon_nigroviridis
ENSAMXG00000034405	-	75	46.957	ENSTNIG00000010832	-	50	46.957	Tetraodon_nigroviridis
ENSAMXG00000034405	-	77	51.818	ENSXCOG00000006729	-	50	51.818	Xiphophorus_couchianus
ENSAMXG00000034405	-	80	42.982	ENSXCOG00000014967	zgc:172131	55	42.982	Xiphophorus_couchianus
ENSAMXG00000034405	-	80	41.880	ENSXMAG00000026876	-	53	41.880	Xiphophorus_maculatus
ENSAMXG00000034405	-	85	48.760	ENSXMAG00000024908	-	58	48.760	Xiphophorus_maculatus
ENSAMXG00000034405	-	83	44.068	ENSXMAG00000027763	-	50	44.068	Xiphophorus_maculatus
ENSAMXG00000034405	-	76	47.706	ENSXMAG00000025223	-	52	47.706	Xiphophorus_maculatus