EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000034582 (Gene tree)
Gene ID: 111190076
Gene Symbol: gpatch3
Alias: zgc:158863
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 11154 bases
Position: chrAPWO02002006.1:215495-226648
Accession: 111190076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045865	G-patch	PF01585.23	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000055822	-	1293	XM_022663831	ENSAMXP00000045865	430 (aa)	XP_022519552	-

Gene Model

Click here to download ENSAMXG00000034582's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034582's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034582	gpatch3	96	53.000	ENSG00000198746	GPATCH3	96	59.350	Homo_sapiens
ENSAMXG00000034582	gpatch3	97	62.451	ENSAPOG00000001212	gpatch3	98	62.648	Acanthochromis_polyacanthus
ENSAMXG00000034582	gpatch3	96	54.656	ENSAMEG00000010801	GPATCH3	95	54.656	Ailuropoda_melanoleuca
ENSAMXG00000034582	gpatch3	99	62.209	ENSAOCG00000019352	gpatch3	99	62.209	Amphiprion_ocellaris
ENSAMXG00000034582	gpatch3	99	62.403	ENSAPEG00000018926	gpatch3	99	62.403	Amphiprion_percula
ENSAMXG00000034582	gpatch3	99	61.209	ENSATEG00000023759	gpatch3	99	62.183	Anabas_testudineus
ENSAMXG00000034582	gpatch3	72	62.791	ENSAPLG00000010745	GPATCH3	99	62.791	Anas_platyrhynchos
ENSAMXG00000034582	gpatch3	95	56.017	ENSACAG00000016709	GPATCH3	94	56.224	Anolis_carolinensis
ENSAMXG00000034582	gpatch3	96	53.400	ENSANAG00000035944	GPATCH3	96	53.600	Aotus_nancymaae
ENSAMXG00000034582	gpatch3	97	61.188	ENSACLG00000012807	gpatch3	97	61.782	Astatotilapia_calliptera
ENSAMXG00000034582	gpatch3	95	54.918	ENSBTAG00000014849	GPATCH3	94	54.918	Bos_taurus
ENSAMXG00000034582	gpatch3	95	37.975	WBGene00019467	K07B1.7	93	38.819	Caenorhabditis_elegans
ENSAMXG00000034582	gpatch3	96	53.600	ENSCJAG00000010000	GPATCH3	94	53.800	Callithrix_jacchus
ENSAMXG00000034582	gpatch3	96	54.656	ENSCAFG00000012265	GPATCH3	95	54.656	Canis_familiaris
ENSAMXG00000034582	gpatch3	96	54.656	ENSCAFG00020021640	GPATCH3	95	54.656	Canis_lupus_dingo
ENSAMXG00000034582	gpatch3	95	54.508	ENSCHIG00000024245	GPATCH3	92	54.508	Capra_hircus
ENSAMXG00000034582	gpatch3	95	54.343	ENSTSYG00000011753	GPATCH3	94	54.747	Carlito_syrichta
ENSAMXG00000034582	gpatch3	67	58.360	ENSCAPG00000007313	GPATCH3	94	58.280	Cavia_aperea
ENSAMXG00000034582	gpatch3	95	54.767	ENSCPOG00000010404	GPATCH3	94	54.767	Cavia_porcellus
ENSAMXG00000034582	gpatch3	96	53.200	ENSCCAG00000030482	GPATCH3	96	53.400	Cebus_capucinus
ENSAMXG00000034582	gpatch3	96	51.400	ENSCATG00000033598	GPATCH3	95	51.394	Cercocebus_atys
ENSAMXG00000034582	gpatch3	95	56.198	ENSCLAG00000012064	GPATCH3	95	55.828	Chinchilla_lanigera
ENSAMXG00000034582	gpatch3	96	58.658	ENSCPBG00000024968	GPATCH3	93	59.091	Chrysemys_picta_bellii
ENSAMXG00000034582	gpatch3	96	52.400	ENSCANG00000036795	GPATCH3	95	52.800	Colobus_angolensis_palliatus
ENSAMXG00000034582	gpatch3	96	57.411	ENSCGRG00001002930	Gpatch3	94	58.038	Cricetulus_griseus_chok1gshd
ENSAMXG00000034582	gpatch3	96	57.411	ENSCGRG00000004699	Gpatch3	94	58.038	Cricetulus_griseus_crigri
ENSAMXG00000034582	gpatch3	99	60.659	ENSCSEG00000005277	gpatch3	99	60.777	Cynoglossus_semilaevis
ENSAMXG00000034582	gpatch3	99	60.000	ENSCVAG00000000827	gpatch3	99	60.777	Cyprinodon_variegatus
ENSAMXG00000034582	gpatch3	97	73.123	ENSDARG00000052747	gpatch3	73	73.123	Danio_rerio
ENSAMXG00000034582	gpatch3	96	54.618	ENSDNOG00000016999	GPATCH3	95	54.618	Dasypus_novemcinctus
ENSAMXG00000034582	gpatch3	96	43.725	ENSEBUG00000013911	gpatch3	91	43.725	Eptatretus_burgeri
ENSAMXG00000034582	gpatch3	95	54.490	ENSEASG00005008636	GPATCH3	94	54.490	Equus_asinus_asinus
ENSAMXG00000034582	gpatch3	95	54.694	ENSECAG00000007653	GPATCH3	94	54.694	Equus_caballus
ENSAMXG00000034582	gpatch3	98	64.050	ENSELUG00000000963	gpatch3	98	64.050	Esox_lucius
ENSAMXG00000034582	gpatch3	97	54.032	ENSFCAG00000012819	GPATCH3	95	54.032	Felis_catus
ENSAMXG00000034582	gpatch3	71	63.174	ENSFALG00000000319	GPATCH3	91	63.174	Ficedula_albicollis
ENSAMXG00000034582	gpatch3	95	54.472	ENSFDAG00000016270	GPATCH3	94	54.472	Fukomys_damarensis
ENSAMXG00000034582	gpatch3	98	63.765	ENSFHEG00000015264	gpatch3	98	63.765	Fundulus_heteroclitus
ENSAMXG00000034582	gpatch3	97	59.604	ENSGMOG00000000991	gpatch3	98	59.604	Gadus_morhua
ENSAMXG00000034582	gpatch3	98	56.513	ENSGALG00000000881	GPATCH3	95	56.513	Gallus_gallus
ENSAMXG00000034582	gpatch3	97	61.753	ENSGAFG00000002531	gpatch3	90	73.817	Gambusia_affinis
ENSAMXG00000034582	gpatch3	99	61.197	ENSGACG00000007199	gpatch3	99	61.197	Gasterosteus_aculeatus
ENSAMXG00000034582	gpatch3	96	59.002	ENSGAGG00000023286	GPATCH3	93	59.436	Gopherus_agassizii
ENSAMXG00000034582	gpatch3	96	52.800	ENSGGOG00000015305	GPATCH3	95	53.400	Gorilla_gorilla
ENSAMXG00000034582	gpatch3	97	60.792	ENSHBUG00000020513	gpatch3	97	68.451	Haplochromis_burtoni
ENSAMXG00000034582	gpatch3	97	53.493	ENSHGLG00000012492	GPATCH3	96	53.892	Heterocephalus_glaber_female
ENSAMXG00000034582	gpatch3	97	53.493	ENSHGLG00100016909	GPATCH3	96	53.892	Heterocephalus_glaber_male
ENSAMXG00000034582	gpatch3	97	60.913	ENSHCOG00000005739	gpatch3	98	61.111	Hippocampus_comes
ENSAMXG00000034582	gpatch3	97	65.631	ENSIPUG00000007697	gpatch3	99	79.032	Ictalurus_punctatus
ENSAMXG00000034582	gpatch3	96	54.309	ENSSTOG00000015220	GPATCH3	95	54.309	Ictidomys_tridecemlineatus
ENSAMXG00000034582	gpatch3	95	54.472	ENSJJAG00000003292	Gpatch3	94	55.081	Jaculus_jaculus
ENSAMXG00000034582	gpatch3	98	60.853	ENSKMAG00000020717	gpatch3	98	61.434	Kryptolebias_marmoratus
ENSAMXG00000034582	gpatch3	98	60.311	ENSLBEG00000007046	gpatch3	97	60.311	Labrus_bergylta
ENSAMXG00000034582	gpatch3	95	72.300	ENSLACG00000011400	GPATCH3	75	72.300	Latimeria_chalumnae
ENSAMXG00000034582	gpatch3	97	63.600	ENSLOCG00000003858	gpatch3	98	63.600	Lepisosteus_oculatus
ENSAMXG00000034582	gpatch3	97	53.557	ENSLAFG00000016691	GPATCH3	96	54.150	Loxodonta_africana
ENSAMXG00000034582	gpatch3	96	53.000	ENSMFAG00000030918	GPATCH3	95	53.200	Macaca_fascicularis
ENSAMXG00000034582	gpatch3	96	53.000	ENSMMUG00000018723	GPATCH3	95	53.200	Macaca_mulatta
ENSAMXG00000034582	gpatch3	85	43.848	ENSMNEG00000033889	GPATCH3	92	44.977	Macaca_nemestrina
ENSAMXG00000034582	gpatch3	96	53.000	ENSMLEG00000033364	GPATCH3	95	53.200	Mandrillus_leucophaeus
ENSAMXG00000034582	gpatch3	99	61.914	ENSMAMG00000023975	gpatch3	99	62.109	Mastacembelus_armatus
ENSAMXG00000034582	gpatch3	97	61.188	ENSMZEG00005019731	gpatch3	97	61.782	Maylandia_zebra
ENSAMXG00000034582	gpatch3	70	62.798	ENSMGAG00000000813	GPATCH3	91	62.798	Meleagris_gallopavo
ENSAMXG00000034582	gpatch3	96	54.274	ENSMAUG00000002005	Gpatch3	95	54.473	Mesocricetus_auratus
ENSAMXG00000034582	gpatch3	95	53.535	ENSMICG00000015656	GPATCH3	94	53.535	Microcebus_murinus
ENSAMXG00000034582	gpatch3	96	54.800	ENSMOCG00000022375	Gpatch3	95	55.200	Microtus_ochrogaster
ENSAMXG00000034582	gpatch3	73	73.373	ENSMMOG00000008963	gpatch3	96	73.373	Mola_mola
ENSAMXG00000034582	gpatch3	95	54.637	ENSMODG00000014417	GPATCH3	93	54.637	Monodelphis_domestica
ENSAMXG00000034582	gpatch3	97	61.000	ENSMALG00000007586	gpatch3	97	62.000	Monopterus_albus
ENSAMXG00000034582	gpatch3	95	55.152	MGP_CAROLIEiJ_G0026594	Gpatch3	94	55.152	Mus_caroli
ENSAMXG00000034582	gpatch3	95	54.435	ENSMUSG00000028850	Gpatch3	94	55.242	Mus_musculus
ENSAMXG00000034582	gpatch3	95	55.533	MGP_PahariEiJ_G0028927	Gpatch3	94	55.533	Mus_pahari
ENSAMXG00000034582	gpatch3	95	54.141	MGP_SPRETEiJ_G0027575	Gpatch3	99	59.763	Mus_spretus
ENSAMXG00000034582	gpatch3	96	54.453	ENSMPUG00000015665	GPATCH3	95	54.656	Mustela_putorius_furo
ENSAMXG00000034582	gpatch3	95	55.441	ENSMLUG00000023528	GPATCH3	94	56.057	Myotis_lucifugus
ENSAMXG00000034582	gpatch3	96	52.918	ENSNGAG00000006821	Gpatch3	95	53.119	Nannospalax_galili
ENSAMXG00000034582	gpatch3	99	59.192	ENSNBRG00000000365	gpatch3	99	59.192	Neolamprologus_brichardi
ENSAMXG00000034582	gpatch3	89	52.463	ENSNLEG00000009387	GPATCH3	92	53.105	Nomascus_leucogenys
ENSAMXG00000034582	gpatch3	95	54.898	ENSMEUG00000003236	GPATCH3	93	55.102	Notamacropus_eugenii
ENSAMXG00000034582	gpatch3	95	55.556	ENSOPRG00000016429	GPATCH3	94	56.173	Ochotona_princeps
ENSAMXG00000034582	gpatch3	95	55.967	ENSODEG00000003292	GPATCH3	93	55.967	Octodon_degus
ENSAMXG00000034582	gpatch3	98	63.327	ENSONIG00000006771	gpatch3	97	63.727	Oreochromis_niloticus
ENSAMXG00000034582	gpatch3	88	54.066	ENSOCUG00000006411	GPATCH3	98	53.696	Oryctolagus_cuniculus
ENSAMXG00000034582	gpatch3	98	79.091	ENSORLG00000004435	gpatch3	86	79.452	Oryzias_latipes
ENSAMXG00000034582	gpatch3	97	60.194	ENSORLG00020022609	gpatch3	98	60.194	Oryzias_latipes_hni
ENSAMXG00000034582	gpatch3	98	79.279	ENSORLG00015008692	gpatch3	94	73.701	Oryzias_latipes_hsok
ENSAMXG00000034582	gpatch3	99	61.840	ENSOMEG00000010991	gpatch3	99	61.840	Oryzias_melastigma
ENSAMXG00000034582	gpatch3	95	54.141	ENSOGAG00000011647	GPATCH3	94	54.141	Otolemur_garnettii
ENSAMXG00000034582	gpatch3	95	54.098	ENSOARG00000003955	GPATCH3	91	54.098	Ovis_aries
ENSAMXG00000034582	gpatch3	96	53.400	ENSPPAG00000032902	GPATCH3	95	54.000	Pan_paniscus
ENSAMXG00000034582	gpatch3	97	53.831	ENSPPRG00000024244	GPATCH3	95	53.831	Panthera_pardus
ENSAMXG00000034582	gpatch3	97	53.082	ENSPTIG00000014693	GPATCH3	95	53.082	Panthera_tigris_altaica
ENSAMXG00000034582	gpatch3	96	53.000	ENSPTRG00000023419	GPATCH3	95	53.600	Pan_troglodytes
ENSAMXG00000034582	gpatch3	96	52.800	ENSPANG00000007984	GPATCH3	95	53.000	Papio_anubis
ENSAMXG00000034582	gpatch3	98	65.868	ENSPKIG00000020073	gpatch3	97	65.868	Paramormyrops_kingsleyae
ENSAMXG00000034582	gpatch3	81	59.596	ENSPSIG00000017160	GPATCH3	95	60.354	Pelodiscus_sinensis
ENSAMXG00000034582	gpatch3	97	62.702	ENSPMGG00000001703	gpatch3	98	63.105	Periophthalmus_magnuspinnatus
ENSAMXG00000034582	gpatch3	95	55.152	ENSPEMG00000020632	Gpatch3	94	55.152	Peromyscus_maniculatus_bairdii
ENSAMXG00000034582	gpatch3	95	55.193	ENSPCIG00000012681	GPATCH3	93	54.786	Phascolarctos_cinereus
ENSAMXG00000034582	gpatch3	97	62.575	ENSPFOG00000009928	gpatch3	97	62.575	Poecilia_formosa
ENSAMXG00000034582	gpatch3	97	61.341	ENSPLAG00000023784	gpatch3	97	61.341	Poecilia_latipinna
ENSAMXG00000034582	gpatch3	97	61.462	ENSPMEG00000010268	gpatch3	97	61.341	Poecilia_mexicana
ENSAMXG00000034582	gpatch3	97	64.463	ENSPREG00000008873	gpatch3	97	64.463	Poecilia_reticulata
ENSAMXG00000034582	gpatch3	96	53.000	ENSPPYG00000001675	GPATCH3	95	53.600	Pongo_abelii
ENSAMXG00000034582	gpatch3	97	53.000	ENSPCAG00000008286	GPATCH3	95	53.600	Procavia_capensis
ENSAMXG00000034582	gpatch3	95	53.939	ENSPCOG00000020145	GPATCH3	94	53.939	Propithecus_coquereli
ENSAMXG00000034582	gpatch3	96	51.313	ENSPVAG00000017282	GPATCH3	95	51.313	Pteropus_vampyrus
ENSAMXG00000034582	gpatch3	96	61.245	ENSPNYG00000005172	gpatch3	98	61.847	Pundamilia_nyererei
ENSAMXG00000034582	gpatch3	100	67.871	ENSPNAG00000018501	gpatch3	100	68.251	Pygocentrus_nattereri
ENSAMXG00000034582	gpatch3	96	53.722	ENSRNOG00000007097	Gpatch3	95	54.728	Rattus_norvegicus
ENSAMXG00000034582	gpatch3	96	52.800	ENSRBIG00000005853	GPATCH3	95	52.800	Rhinopithecus_bieti
ENSAMXG00000034582	gpatch3	96	52.400	ENSRROG00000038382	GPATCH3	95	52.800	Rhinopithecus_roxellana
ENSAMXG00000034582	gpatch3	95	54.141	ENSSBOG00000019680	GPATCH3	96	61.561	Saimiri_boliviensis_boliviensis
ENSAMXG00000034582	gpatch3	95	55.000	ENSSHAG00000014268	GPATCH3	93	55.200	Sarcophilus_harrisii
ENSAMXG00000034582	gpatch3	99	62.885	ENSSFOG00015009602	gpatch3	99	62.885	Scleropages_formosus
ENSAMXG00000034582	gpatch3	97	62.648	ENSSMAG00000002067	gpatch3	98	62.648	Scophthalmus_maximus
ENSAMXG00000034582	gpatch3	97	62.624	ENSSDUG00000017071	gpatch3	98	63.022	Seriola_dumerili
ENSAMXG00000034582	gpatch3	97	62.425	ENSSLDG00000016549	gpatch3	98	62.823	Seriola_lalandi_dorsalis
ENSAMXG00000034582	gpatch3	95	58.261	ENSSPUG00000018299	GPATCH3	94	58.478	Sphenodon_punctatus
ENSAMXG00000034582	gpatch3	99	61.896	ENSSPAG00000013046	gpatch3	99	61.896	Stegastes_partitus
ENSAMXG00000034582	gpatch3	96	55.152	ENSSSCG00000003564	GPATCH3	92	55.152	Sus_scrofa
ENSAMXG00000034582	gpatch3	82	55.443	ENSTGUG00000000986	GPATCH3	98	55.443	Taeniopygia_guttata
ENSAMXG00000034582	gpatch3	99	59.231	ENSTRUG00000013294	gpatch3	99	59.231	Takifugu_rubripes
ENSAMXG00000034582	gpatch3	97	61.078	ENSTNIG00000009657	gpatch3	99	61.277	Tetraodon_nigroviridis
ENSAMXG00000034582	gpatch3	80	63.636	ENSTBEG00000002042	GPATCH3	77	63.636	Tupaia_belangeri
ENSAMXG00000034582	gpatch3	95	52.361	ENSTTRG00000016677	GPATCH3	95	51.919	Tursiops_truncatus
ENSAMXG00000034582	gpatch3	96	53.846	ENSUAMG00000026235	GPATCH3	95	54.453	Ursus_americanus
ENSAMXG00000034582	gpatch3	96	54.049	ENSUMAG00000011894	GPATCH3	95	54.656	Ursus_maritimus
ENSAMXG00000034582	gpatch3	96	54.656	ENSVVUG00000012041	GPATCH3	95	54.858	Vulpes_vulpes
ENSAMXG00000034582	gpatch3	95	57.812	ENSXETG00000030345	GPATCH3	97	57.812	Xenopus_tropicalis
ENSAMXG00000034582	gpatch3	97	67.647	ENSXCOG00000016129	gpatch3	97	67.647	Xiphophorus_couchianus
ENSAMXG00000034582	gpatch3	97	61.431	ENSXMAG00000010749	gpatch3	97	61.431	Xiphophorus_maculatus