EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000034694 (Gene tree)
Gene ID: 103047334
Gene Symbol: cnot6b
Alias: zgc:171797
Full Name: CCR4-NOT transcription complex subunit 6
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 14458 bases
Position: chrAPWO02000074.1:23160-37617
Accession: 103047334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038203	Exo_endo_phos	PF03372.23	2.3e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000051468	-	5867	XM_007237209	ENSAMXP00000038203	558 (aa)	XP_007237271	UPI000BBDF3A4

Gene Model

Click here to download ENSAMXG00000034694's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000034694	cnot6b	100	72.401	ENSAMXG00000008943	cnot6l	98	72.401
ENSAMXG00000034694	cnot6b	100	89.606	ENSAMXG00000019140	cnot6a	100	89.606

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034694	cnot6b	100	84.946	ENSG00000113300	CNOT6	100	89.474	Homo_sapiens
ENSAMXG00000034694	cnot6b	100	90.340	ENSAPOG00000009994	cnot6b	100	90.340	Acanthochromis_polyacanthus
ENSAMXG00000034694	cnot6b	100	85.179	ENSAMEG00000000949	CNOT6	99	85.179	Ailuropoda_melanoleuca
ENSAMXG00000034694	cnot6b	100	88.372	ENSACIG00000016566	cnot6b	100	88.372	Amphilophus_citrinellus
ENSAMXG00000034694	cnot6b	100	90.340	ENSAOCG00000006893	cnot6b	100	90.340	Amphiprion_ocellaris
ENSAMXG00000034694	cnot6b	100	90.340	ENSAPEG00000016949	cnot6b	100	90.340	Amphiprion_percula
ENSAMXG00000034694	cnot6b	100	88.730	ENSATEG00000007862	cnot6b	100	88.730	Anabas_testudineus
ENSAMXG00000034694	cnot6b	100	86.201	ENSAPLG00000012715	CNOT6	99	86.201	Anas_platyrhynchos
ENSAMXG00000034694	cnot6b	100	84.946	ENSACAG00000016548	CNOT6	100	84.946	Anolis_carolinensis
ENSAMXG00000034694	cnot6b	100	84.946	ENSANAG00000030436	CNOT6	96	84.946	Aotus_nancymaae
ENSAMXG00000034694	cnot6b	100	87.835	ENSACLG00000008279	cnot6b	100	88.909	Astatotilapia_calliptera
ENSAMXG00000034694	cnot6b	100	85.484	ENSBTAG00000017362	CNOT6	100	85.484	Bos_taurus
ENSAMXG00000034694	cnot6b	100	84.946	ENSCJAG00000009795	CNOT6	100	84.946	Callithrix_jacchus
ENSAMXG00000034694	cnot6b	100	85.484	ENSCAFG00000000464	CNOT6	100	85.484	Canis_familiaris
ENSAMXG00000034694	cnot6b	100	85.484	ENSCAFG00020002441	CNOT6	100	85.484	Canis_lupus_dingo
ENSAMXG00000034694	cnot6b	100	85.125	ENSCHIG00000019100	CNOT6	100	85.125	Capra_hircus
ENSAMXG00000034694	cnot6b	100	84.767	ENSTSYG00000003982	CNOT6	100	84.767	Carlito_syrichta
ENSAMXG00000034694	cnot6b	100	80.466	ENSCPOG00000035657	CNOT6	100	80.466	Cavia_porcellus
ENSAMXG00000034694	cnot6b	100	80.466	ENSCCAG00000033670	CNOT6	100	80.466	Cebus_capucinus
ENSAMXG00000034694	cnot6b	100	84.946	ENSCATG00000042014	CNOT6	100	84.946	Cercocebus_atys
ENSAMXG00000034694	cnot6b	100	83.871	ENSCLAG00000010489	CNOT6	100	83.871	Chinchilla_lanigera
ENSAMXG00000034694	cnot6b	100	84.946	ENSCSAG00000008165	CNOT6	100	84.946	Chlorocebus_sabaeus
ENSAMXG00000034694	cnot6b	100	85.663	ENSCHOG00000009680	CNOT6	100	85.663	Choloepus_hoffmanni
ENSAMXG00000034694	cnot6b	100	85.842	ENSCPBG00000008908	CNOT6	100	85.842	Chrysemys_picta_bellii
ENSAMXG00000034694	cnot6b	100	85.125	ENSCANG00000026756	CNOT6	100	85.125	Colobus_angolensis_palliatus
ENSAMXG00000034694	cnot6b	100	84.229	ENSCGRG00001011452	Cnot6	100	84.229	Cricetulus_griseus_chok1gshd
ENSAMXG00000034694	cnot6b	100	81.900	ENSCGRG00000010407	Cnot6	100	81.900	Cricetulus_griseus_crigri
ENSAMXG00000034694	cnot6b	100	88.909	ENSCSEG00000010939	cnot6b	100	88.909	Cynoglossus_semilaevis
ENSAMXG00000034694	cnot6b	100	87.835	ENSCVAG00000010538	cnot6b	100	87.835	Cyprinodon_variegatus
ENSAMXG00000034694	cnot6b	100	87.993	ENSDARG00000008255	cnot6a	100	87.993	Danio_rerio
ENSAMXG00000034694	cnot6b	100	86.918	ENSDARG00000101072	cnot6b	100	86.918	Danio_rerio
ENSAMXG00000034694	cnot6b	100	85.484	ENSDNOG00000041644	CNOT6	100	85.484	Dasypus_novemcinctus
ENSAMXG00000034694	cnot6b	100	77.419	ENSDORG00000001708	Cnot6	100	77.419	Dipodomys_ordii
ENSAMXG00000034694	cnot6b	100	68.157	ENSETEG00000006975	CNOT6	100	68.157	Echinops_telfairi
ENSAMXG00000034694	cnot6b	100	85.125	ENSEASG00005012794	-	100	85.125	Equus_asinus_asinus
ENSAMXG00000034694	cnot6b	90	80.639	ENSEASG00005012957	-	99	80.639	Equus_asinus_asinus
ENSAMXG00000034694	cnot6b	100	85.663	ENSECAG00000019325	CNOT6	100	85.663	Equus_caballus
ENSAMXG00000034694	cnot6b	100	80.287	ENSECAG00000012704	-	99	80.287	Equus_caballus
ENSAMXG00000034694	cnot6b	100	84.588	ENSEEUG00000015382	CNOT6	100	84.588	Erinaceus_europaeus
ENSAMXG00000034694	cnot6b	100	84.946	ENSELUG00000024580	cnot6a	100	84.946	Esox_lucius
ENSAMXG00000034694	cnot6b	100	85.891	ENSELUG00000015981	cnot6b	99	85.891	Esox_lucius
ENSAMXG00000034694	cnot6b	100	85.484	ENSFCAG00000001881	CNOT6	100	85.484	Felis_catus
ENSAMXG00000034694	cnot6b	100	86.380	ENSFALG00000007699	CNOT6	100	86.380	Ficedula_albicollis
ENSAMXG00000034694	cnot6b	100	84.050	ENSFDAG00000001999	CNOT6	100	84.050	Fukomys_damarensis
ENSAMXG00000034694	cnot6b	68	85.938	ENSFHEG00000013756	cnot6b	99	85.938	Fundulus_heteroclitus
ENSAMXG00000034694	cnot6b	95	89.414	ENSGMOG00000009767	cnot6b	99	89.414	Gadus_morhua
ENSAMXG00000034694	cnot6b	100	86.201	ENSGALG00000034316	CNOT6	100	86.201	Gallus_gallus
ENSAMXG00000034694	cnot6b	100	87.835	ENSGAFG00000008525	cnot6b	100	87.835	Gambusia_affinis
ENSAMXG00000034694	cnot6b	95	87.713	ENSGACG00000018046	cnot6b	99	87.713	Gasterosteus_aculeatus
ENSAMXG00000034694	cnot6b	100	70.841	ENSGAGG00000012176	CNOT6	100	70.841	Gopherus_agassizii
ENSAMXG00000034694	cnot6b	100	84.946	ENSGGOG00000003675	CNOT6	100	84.946	Gorilla_gorilla
ENSAMXG00000034694	cnot6b	100	88.014	ENSHBUG00000002819	cnot6b	100	89.088	Haplochromis_burtoni
ENSAMXG00000034694	cnot6b	100	84.050	ENSHGLG00000017756	CNOT6	100	84.050	Heterocephalus_glaber_female
ENSAMXG00000034694	cnot6b	100	84.050	ENSHGLG00100005747	CNOT6	100	84.050	Heterocephalus_glaber_male
ENSAMXG00000034694	cnot6b	100	86.762	ENSHCOG00000016176	cnot6b	100	87.835	Hippocampus_comes
ENSAMXG00000034694	cnot6b	100	92.115	ENSIPUG00000017482	cnot6b	100	92.115	Ictalurus_punctatus
ENSAMXG00000034694	cnot6b	100	88.889	ENSIPUG00000019831	cnot6a	100	88.889	Ictalurus_punctatus
ENSAMXG00000034694	cnot6b	100	85.125	ENSSTOG00000002803	CNOT6	100	85.125	Ictidomys_tridecemlineatus
ENSAMXG00000034694	cnot6b	100	83.871	ENSJJAG00000012296	Cnot6	100	83.871	Jaculus_jaculus
ENSAMXG00000034694	cnot6b	100	88.014	ENSKMAG00000004640	cnot6b	100	88.014	Kryptolebias_marmoratus
ENSAMXG00000034694	cnot6b	100	87.478	ENSLBEG00000027917	cnot6b	100	88.551	Labrus_bergylta
ENSAMXG00000034694	cnot6b	100	90.143	ENSLOCG00000010102	cnot6b	99	90.143	Lepisosteus_oculatus
ENSAMXG00000034694	cnot6b	100	86.201	ENSLAFG00000016742	CNOT6	100	86.201	Loxodonta_africana
ENSAMXG00000034694	cnot6b	100	84.946	ENSMFAG00000030867	CNOT6	100	84.946	Macaca_fascicularis
ENSAMXG00000034694	cnot6b	100	84.946	ENSMMUG00000018690	CNOT6	100	84.946	Macaca_mulatta
ENSAMXG00000034694	cnot6b	100	84.946	ENSMNEG00000038565	CNOT6	100	84.946	Macaca_nemestrina
ENSAMXG00000034694	cnot6b	100	84.946	ENSMLEG00000010555	CNOT6	100	84.946	Mandrillus_leucophaeus
ENSAMXG00000034694	cnot6b	100	90.340	ENSMAMG00000007515	cnot6b	100	90.340	Mastacembelus_armatus
ENSAMXG00000034694	cnot6b	100	87.835	ENSMZEG00005012899	cnot6b	100	88.909	Maylandia_zebra
ENSAMXG00000034694	cnot6b	100	84.588	ENSMAUG00000019798	Cnot6	100	84.588	Mesocricetus_auratus
ENSAMXG00000034694	cnot6b	100	83.333	ENSMICG00000013018	-	100	83.333	Microcebus_murinus
ENSAMXG00000034694	cnot6b	98	77.248	ENSMICG00000028378	-	99	77.248	Microcebus_murinus
ENSAMXG00000034694	cnot6b	100	84.588	ENSMOCG00000021662	Cnot6	100	84.588	Microtus_ochrogaster
ENSAMXG00000034694	cnot6b	100	87.993	ENSMMOG00000003227	cnot6b	100	87.993	Mola_mola
ENSAMXG00000034694	cnot6b	100	85.663	ENSMODG00000003979	CNOT6	100	85.663	Monodelphis_domestica
ENSAMXG00000034694	cnot6b	100	89.982	ENSMALG00000014251	cnot6b	100	89.982	Monopterus_albus
ENSAMXG00000034694	cnot6b	100	84.767	MGP_CAROLIEiJ_G0016277	Cnot6	100	84.767	Mus_caroli
ENSAMXG00000034694	cnot6b	100	84.767	ENSMUSG00000020362	Cnot6	100	84.767	Mus_musculus
ENSAMXG00000034694	cnot6b	100	84.767	MGP_PahariEiJ_G0017413	Cnot6	100	84.767	Mus_pahari
ENSAMXG00000034694	cnot6b	100	84.767	MGP_SPRETEiJ_G0017122	Cnot6	100	84.767	Mus_spretus
ENSAMXG00000034694	cnot6b	100	85.842	ENSMPUG00000000587	CNOT6	96	85.842	Mustela_putorius_furo
ENSAMXG00000034694	cnot6b	100	83.659	ENSMLUG00000010257	CNOT6	100	83.659	Myotis_lucifugus
ENSAMXG00000034694	cnot6b	100	84.050	ENSNGAG00000008269	Cnot6	100	84.050	Nannospalax_galili
ENSAMXG00000034694	cnot6b	100	88.014	ENSNBRG00000010798	cnot6b	100	89.088	Neolamprologus_brichardi
ENSAMXG00000034694	cnot6b	100	84.229	ENSNLEG00000002322	CNOT6	100	84.229	Nomascus_leucogenys
ENSAMXG00000034694	cnot6b	81	82.326	ENSMEUG00000000025	CNOT6	81	82.326	Notamacropus_eugenii
ENSAMXG00000034694	cnot6b	88	86.667	ENSOPRG00000008244	-	88	86.667	Ochotona_princeps
ENSAMXG00000034694	cnot6b	100	83.871	ENSODEG00000007041	CNOT6	100	83.871	Octodon_degus
ENSAMXG00000034694	cnot6b	75	91.017	ENSONIG00000013027	cnot6b	99	91.017	Oreochromis_niloticus
ENSAMXG00000034694	cnot6b	100	84.767	ENSOANG00000010226	CNOT6	100	84.767	Ornithorhynchus_anatinus
ENSAMXG00000034694	cnot6b	100	84.107	ENSOCUG00000011083	CNOT6	100	84.107	Oryctolagus_cuniculus
ENSAMXG00000034694	cnot6b	100	88.909	ENSORLG00000005059	cnot6b	100	88.909	Oryzias_latipes
ENSAMXG00000034694	cnot6b	100	88.909	ENSORLG00020012784	cnot6b	100	88.909	Oryzias_latipes_hni
ENSAMXG00000034694	cnot6b	94	88.719	ENSORLG00015022658	cnot6b	98	88.719	Oryzias_latipes_hsok
ENSAMXG00000034694	cnot6b	100	89.267	ENSOMEG00000005295	cnot6b	100	89.267	Oryzias_melastigma
ENSAMXG00000034694	cnot6b	94	84.571	ENSOGAG00000032470	CNOT6	100	84.571	Otolemur_garnettii
ENSAMXG00000034694	cnot6b	97	84.715	ENSOARG00000001003	CNOT6	100	84.715	Ovis_aries
ENSAMXG00000034694	cnot6b	100	84.946	ENSPPAG00000032253	CNOT6	100	84.946	Pan_paniscus
ENSAMXG00000034694	cnot6b	100	85.305	ENSPPRG00000011912	CNOT6	100	85.305	Panthera_pardus
ENSAMXG00000034694	cnot6b	100	85.305	ENSPTIG00000016794	CNOT6	100	85.305	Panthera_tigris_altaica
ENSAMXG00000034694	cnot6b	100	84.946	ENSPTRG00000017636	CNOT6	100	84.946	Pan_troglodytes
ENSAMXG00000034694	cnot6b	100	84.946	ENSPANG00000016191	CNOT6	100	84.946	Papio_anubis
ENSAMXG00000034694	cnot6b	100	87.993	ENSPKIG00000021368	cnot6b	100	87.993	Paramormyrops_kingsleyae
ENSAMXG00000034694	cnot6b	98	86.422	ENSPSIG00000017307	CNOT6	100	86.422	Pelodiscus_sinensis
ENSAMXG00000034694	cnot6b	100	89.445	ENSPMGG00000011238	cnot6b	100	89.445	Periophthalmus_magnuspinnatus
ENSAMXG00000034694	cnot6b	100	83.871	ENSPEMG00000000627	Cnot6	100	83.871	Peromyscus_maniculatus_bairdii
ENSAMXG00000034694	cnot6b	100	85.663	ENSPCIG00000020319	CNOT6	99	85.663	Phascolarctos_cinereus
ENSAMXG00000034694	cnot6b	100	88.551	ENSPFOG00000006291	cnot6b	100	88.551	Poecilia_formosa
ENSAMXG00000034694	cnot6b	100	85.152	ENSPLAG00000008266	cnot6b	100	85.152	Poecilia_latipinna
ENSAMXG00000034694	cnot6b	100	88.730	ENSPMEG00000009091	cnot6b	100	88.730	Poecilia_mexicana
ENSAMXG00000034694	cnot6b	100	87.657	ENSPREG00000003713	cnot6b	100	87.657	Poecilia_reticulata
ENSAMXG00000034694	cnot6b	100	84.946	ENSPPYG00000016137	CNOT6	100	84.946	Pongo_abelii
ENSAMXG00000034694	cnot6b	71	83.146	ENSPCAG00000005599	-	71	83.146	Procavia_capensis
ENSAMXG00000034694	cnot6b	100	79.928	ENSPCOG00000017359	CNOT6	100	80.287	Propithecus_coquereli
ENSAMXG00000034694	cnot6b	100	82.258	ENSPVAG00000003069	CNOT6	100	82.258	Pteropus_vampyrus
ENSAMXG00000034694	cnot6b	100	87.657	ENSPNYG00000000321	cnot6b	100	88.730	Pundamilia_nyererei
ENSAMXG00000034694	cnot6b	100	94.982	ENSPNAG00000028816	cnot6b	100	94.982	Pygocentrus_nattereri
ENSAMXG00000034694	cnot6b	100	89.785	ENSPNAG00000029586	cnot6a	100	89.785	Pygocentrus_nattereri
ENSAMXG00000034694	cnot6b	100	83.692	ENSRNOG00000054891	Cnot6	100	83.692	Rattus_norvegicus
ENSAMXG00000034694	cnot6b	100	84.767	ENSRBIG00000004309	CNOT6	100	84.767	Rhinopithecus_bieti
ENSAMXG00000034694	cnot6b	100	84.767	ENSRROG00000035378	CNOT6	100	84.767	Rhinopithecus_roxellana
ENSAMXG00000034694	cnot6b	100	84.946	ENSSBOG00000030494	CNOT6	100	84.946	Saimiri_boliviensis_boliviensis
ENSAMXG00000034694	cnot6b	100	85.663	ENSSHAG00000017436	CNOT6	100	85.663	Sarcophilus_harrisii
ENSAMXG00000034694	cnot6b	100	90.681	ENSSFOG00015015133	CNOT6	100	90.681	Scleropages_formosus
ENSAMXG00000034694	cnot6b	100	88.710	ENSSFOG00015022383	cnot6a	96	88.710	Scleropages_formosus
ENSAMXG00000034694	cnot6b	100	88.730	ENSSMAG00000003084	cnot6b	100	88.730	Scophthalmus_maximus
ENSAMXG00000034694	cnot6b	100	89.982	ENSSDUG00000004151	cnot6b	100	89.982	Seriola_dumerili
ENSAMXG00000034694	cnot6b	100	89.088	ENSSLDG00000004448	cnot6b	100	90.161	Seriola_lalandi_dorsalis
ENSAMXG00000034694	cnot6b	64	67.967	ENSSARG00000012650	-	100	67.967	Sorex_araneus
ENSAMXG00000034694	cnot6b	100	85.842	ENSSPUG00000007893	CNOT6	100	85.842	Sphenodon_punctatus
ENSAMXG00000034694	cnot6b	100	90.340	ENSSPAG00000000149	cnot6b	100	90.340	Stegastes_partitus
ENSAMXG00000034694	cnot6b	100	85.663	ENSSSCG00000014009	CNOT6	100	85.663	Sus_scrofa
ENSAMXG00000034694	cnot6b	100	86.022	ENSTGUG00000001119	CNOT6	100	86.022	Taeniopygia_guttata
ENSAMXG00000034694	cnot6b	100	86.201	ENSTRUG00000002818	cnot6b	100	86.201	Takifugu_rubripes
ENSAMXG00000034694	cnot6b	100	87.276	ENSTNIG00000004443	cnot6b	99	87.276	Tetraodon_nigroviridis
ENSAMXG00000034694	cnot6b	76	71.642	ENSTBEG00000017094	-	87	71.642	Tupaia_belangeri
ENSAMXG00000034694	cnot6b	100	85.125	ENSTTRG00000009363	CNOT6	100	85.125	Tursiops_truncatus
ENSAMXG00000034694	cnot6b	90	75.149	ENSUAMG00000004579	CNOT6	99	75.149	Ursus_americanus
ENSAMXG00000034694	cnot6b	100	81.709	ENSUMAG00000024577	CNOT6	100	81.709	Ursus_maritimus
ENSAMXG00000034694	cnot6b	84	86.486	ENSVPAG00000003593	CNOT6	83	86.486	Vicugna_pacos
ENSAMXG00000034694	cnot6b	100	85.484	ENSVVUG00000026940	CNOT6	100	85.484	Vulpes_vulpes
ENSAMXG00000034694	cnot6b	100	85.152	ENSXCOG00000003360	cnot6b	100	85.152	Xiphophorus_couchianus
ENSAMXG00000034694	cnot6b	100	88.372	ENSXMAG00000008730	cnot6b	100	88.372	Xiphophorus_maculatus