EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000034719 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7156 bases
Position: chr5:21901697-21908852
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000041887	RRM_1	PF00076.22	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000034315	-	375	-	ENSAMXP00000041887	124 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000034719's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034719's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000034719	-	68	44.444	ENSAMXG00000031223	elavl1a	67	44.444
ENSAMXG00000034719	-	68	43.210	ENSAMXG00000006391	elavl1b	69	43.210
ENSAMXG00000034719	-	69	32.877	ENSAMXG00000024951	-	57	32.877
ENSAMXG00000034719	-	68	40.741	ENSAMXG00000036990	ELAVL2	58	40.741
ENSAMXG00000034719	-	98	40.698	ENSAMXG00000040498	elavl3	68	40.698
ENSAMXG00000034719	-	59	34.247	ENSAMXG00000002894	cirbpa	53	32.530
ENSAMXG00000034719	-	91	39.506	ENSAMXG00000000687	elavl4	60	39.506

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034719	-	73	91.111	ENSBTAG00000051439	-	57	91.111	Bos_taurus
ENSAMXG00000034719	-	98	76.033	ENSCHIG00000009150	-	75	89.130	Capra_hircus
ENSAMXG00000034719	-	74	93.478	ENSCVAG00000018670	si:dkey-205h23.2	52	82.645	Cyprinodon_variegatus
ENSAMXG00000034719	-	96	77.311	ENSECAG00000036983	-	70	89.130	Equus_caballus
ENSAMXG00000034719	-	73	95.556	ENSGALG00000048972	-	83	95.556	Gallus_gallus
ENSAMXG00000034719	-	77	56.250	ENSNBRG00000010123	-	75	62.500	Neolamprologus_brichardi
ENSAMXG00000034719	-	56	92.754	ENSOANG00000031583	-	100	92.754	Ornithorhynchus_anatinus
ENSAMXG00000034719	-	77	89.474	ENSPTIG00000005413	-	70	89.130	Panthera_tigris_altaica
ENSAMXG00000034719	-	96	99.160	ENSPKIG00000024667	-	96	99.160	Paramormyrops_kingsleyae
ENSAMXG00000034719	-	96	99.160	ENSPLAG00000013524	-	96	99.160	Poecilia_latipinna
ENSAMXG00000034719	-	74	93.478	ENSPLAG00000015969	-	75	93.478	Poecilia_latipinna
ENSAMXG00000034719	-	74	93.478	ENSPLAG00000000224	-	75	93.478	Poecilia_latipinna
ENSAMXG00000034719	-	96	99.160	ENSPMEG00000011603	-	96	99.160	Poecilia_mexicana
ENSAMXG00000034719	-	69	60.465	ENSPNYG00000011502	-	65	69.565	Pundamilia_nyererei
ENSAMXG00000034719	-	74	93.478	ENSSLDG00000015995	-	50	82.645	Seriola_lalandi_dorsalis
ENSAMXG00000034719	-	77	89.474	ENSUAMG00000025729	-	75	89.130	Ursus_americanus
ENSAMXG00000034719	-	77	89.474	ENSUMAG00000008820	-	75	89.130	Ursus_maritimus
ENSAMXG00000034719	-	72	91.011	ENSVVUG00000003252	-	77	91.011	Vulpes_vulpes
ENSAMXG00000034719	-	96	76.471	ENSVVUG00000018262	-	71	89.130	Vulpes_vulpes