EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000034850 (Gene tree)
Gene ID: 103028654
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-1A
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 10762 bases
Position: chr12:2205386-2216147
Accession: 103028654
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000040738	MMR_HSR1	PF01926.23	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000048978	-	5480	-	ENSAMXP00000043445	218 (aa)	-	-
ENSAMXT00000045110	-	5264	XM_015604877	ENSAMXP00000040738	202 (aa)	XP_015460363	UPI000BBD6E4A

Gene Model

Click here to download ENSAMXG00000034850's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000034850's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000034850	-	58	33.898	ENSAMXG00000039062	arl8a	61	33.898
ENSAMXG00000034850	-	99	44.059	ENSAMXG00000042419	rab3c	93	44.059
ENSAMXG00000034850	-	99	45.455	ENSAMXG00000037623	-	96	45.455
ENSAMXG00000034850	-	100	94.059	ENSAMXG00000032564	rab1ab	100	94.059
ENSAMXG00000034850	-	78	37.423	ENSAMXG00000043003	rab34a	62	37.423
ENSAMXG00000034850	-	81	45.833	ENSAMXG00000040460	zgc:101559	69	45.833
ENSAMXG00000034850	-	96	44.845	ENSAMXG00000036772	rab2a	99	43.333
ENSAMXG00000034850	-	77	38.994	ENSAMXG00000026059	RAB9A	79	38.994
ENSAMXG00000034850	-	85	46.199	ENSAMXG00000029712	rab25b	81	46.199
ENSAMXG00000034850	-	78	40.994	ENSAMXG00000017266	rab36	61	40.994
ENSAMXG00000034850	-	83	36.628	ENSAMXG00000002254	-	80	36.628
ENSAMXG00000034850	-	83	52.381	ENSAMXG00000003155	rab11a	78	52.381
ENSAMXG00000034850	-	87	30.570	ENSAMXG00000035770	rasl11a	76	30.570
ENSAMXG00000034850	-	96	33.163	ENSAMXG00000010334	rras	92	33.163
ENSAMXG00000034850	-	58	31.405	ENSAMXG00000011499	arl2	61	31.405
ENSAMXG00000034850	-	80	37.423	ENSAMXG00000012327	nras	90	37.423
ENSAMXG00000034850	-	96	80.928	ENSAMXG00000039486	zgc:171927	92	80.928
ENSAMXG00000034850	-	58	31.356	ENSAMXG00000032775	arl8bb	61	31.356
ENSAMXG00000034850	-	82	47.879	ENSAMXG00000033470	RAB15	78	47.879
ENSAMXG00000034850	-	96	41.538	ENSAMXG00000003717	rab39bb	92	41.538
ENSAMXG00000034850	-	98	51.515	ENSAMXG00000030712	rab13	98	51.515
ENSAMXG00000034850	-	96	39.500	ENSAMXG00000013054	rab22a	97	39.500
ENSAMXG00000034850	-	59	37.097	ENSAMXG00000034227	rab32b	59	37.097
ENSAMXG00000034850	-	89	35.326	ENSAMXG00000033907	hrasb	86	36.970
ENSAMXG00000034850	-	73	39.073	ENSAMXG00000006018	rab34b	63	40.123
ENSAMXG00000034850	-	95	42.784	ENSAMXG00000024632	rab11al	91	42.784
ENSAMXG00000034850	-	96	42.051	ENSAMXG00000037267	-	92	42.564
ENSAMXG00000034850	-	80	64.198	ENSAMXG00000039865	rab35b	100	52.970
ENSAMXG00000034850	-	59	30.833	ENSAMXG00000030683	arl8ba	62	30.833
ENSAMXG00000034850	-	85	47.368	ENSAMXG00000040879	rab25a	80	47.368
ENSAMXG00000034850	-	69	30.496	ENSAMXG00000043381	zgc:110197	77	30.496
ENSAMXG00000034850	-	96	34.848	ENSAMXG00000031957	zgc:100918	96	34.848
ENSAMXG00000034850	-	77	40.881	ENSAMXG00000025889	RAB9A	79	40.881
ENSAMXG00000034850	-	87	41.573	ENSAMXG00000032729	rab42a	84	41.573
ENSAMXG00000034850	-	59	30.328	ENSAMXG00000025423	arl4ab	63	30.328
ENSAMXG00000034850	-	93	45.213	ENSAMXG00000009640	rab14	87	45.213
ENSAMXG00000034850	-	82	30.286	ENSAMXG00000042814	rasl11b	70	30.286
ENSAMXG00000034850	-	88	42.051	ENSAMXG00000040286	rab33ba	82	41.624
ENSAMXG00000034850	-	82	48.193	ENSAMXG00000043951	rab15	79	48.193
ENSAMXG00000034850	-	96	45.960	ENSAMXG00000042655	rab11bb	91	45.960
ENSAMXG00000034850	-	79	32.121	ENSAMXG00000041488	dnajc27	60	32.121
ENSAMXG00000034850	-	80	38.922	ENSAMXG00000026476	rab9b	74	38.922
ENSAMXG00000034850	-	94	41.584	ENSAMXG00000037428	-	94	41.584
ENSAMXG00000034850	-	96	42.347	ENSAMXG00000036179	rab5aa	89	42.347
ENSAMXG00000034850	-	56	31.304	ENSAMXG00000006638	arl4aa	57	31.304
ENSAMXG00000034850	-	96	38.144	ENSAMXG00000032547	rab6a	93	38.144
ENSAMXG00000034850	-	71	34.483	ENSAMXG00000029130	-	78	34.483
ENSAMXG00000034850	-	84	45.029	ENSAMXG00000041657	rab39ba	80	45.029
ENSAMXG00000034850	-	99	90.955	ENSAMXG00000003547	rab1ba	89	90.955
ENSAMXG00000034850	-	82	35.329	ENSAMXG00000033764	si:ch73-116o1.2	80	35.329
ENSAMXG00000034850	-	60	31.298	ENSAMXG00000033427	rasl10a	65	31.298
ENSAMXG00000034850	-	96	42.564	ENSAMXG00000043717	rab5c	88	43.077
ENSAMXG00000034850	-	89	35.326	ENSAMXG00000035885	hrasa	86	36.970
ENSAMXG00000034850	-	81	37.195	ENSAMXG00000017217	kras	95	35.359
ENSAMXG00000034850	-	96	45.641	ENSAMXG00000042073	rab18b	95	45.641
ENSAMXG00000034850	-	69	30.496	ENSAMXG00000037720	arl3	72	30.496
ENSAMXG00000034850	-	79	35.000	ENSAMXG00000014960	rab23	87	33.333
ENSAMXG00000034850	-	79	38.650	ENSAMXG00000032027	rab7a	79	38.650
ENSAMXG00000034850	-	84	46.199	ENSAMXG00000039737	RAB19	78	46.199
ENSAMXG00000034850	-	75	35.714	ENSAMXG00000033390	rap1aa	78	35.714
ENSAMXG00000034850	-	80	61.728	ENSAMXG00000038243	si:dkey-16l2.16	90	67.826
ENSAMXG00000034850	-	76	40.523	ENSAMXG00000033216	rab41	78	40.523
ENSAMXG00000034850	-	97	34.653	ENSAMXG00000036330	RAB38	93	34.653
ENSAMXG00000034850	-	78	39.394	ENSAMXG00000032663	si:dkey-13a21.4	76	39.394
ENSAMXG00000034850	-	96	42.347	ENSAMXG00000035919	rab5ab	89	42.347
ENSAMXG00000034850	-	80	63.580	ENSAMXG00000040604	-	80	63.580
ENSAMXG00000034850	-	96	36.788	ENSAMXG00000004630	rab6ba	92	36.788
ENSAMXG00000034850	-	83	52.071	ENSAMXG00000004882	rab12	77	48.148
ENSAMXG00000034850	-	91	46.196	ENSAMXG00000040126	-	68	46.196
ENSAMXG00000034850	-	82	34.731	ENSAMXG00000010919	mras	80	34.731
ENSAMXG00000034850	-	86	48.851	ENSAMXG00000009935	rab30	70	48.851
ENSAMXG00000034850	-	81	30.409	ENSAMXG00000033069	si:cabz01085950.1	82	30.409
ENSAMXG00000034850	-	80	38.922	ENSAMXG00000040611	rabl2	73	38.922

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000034850	-	100	94.554	ENSG00000138069	RAB1A	98	100.000	Homo_sapiens
ENSAMXG00000034850	-	100	92.574	ENSAPOG00000008143	-	100	92.574	Acanthochromis_polyacanthus
ENSAMXG00000034850	-	100	94.554	ENSAMEG00000001127	RAB1A	99	94.554	Ailuropoda_melanoleuca
ENSAMXG00000034850	-	100	92.574	ENSAOCG00000020606	-	100	92.574	Amphiprion_ocellaris
ENSAMXG00000034850	-	100	92.574	ENSAPEG00000022488	-	100	92.574	Amphiprion_percula
ENSAMXG00000034850	-	100	94.554	ENSANAG00000020929	RAB1A	99	94.554	Aotus_nancymaae
ENSAMXG00000034850	-	100	93.069	ENSACLG00000003326	-	100	93.069	Astatotilapia_calliptera
ENSAMXG00000034850	-	100	94.554	ENSBTAG00000016720	RAB1A	99	94.554	Bos_taurus
ENSAMXG00000034850	-	100	94.554	ENSCJAG00000046275	RAB1A	99	94.554	Callithrix_jacchus
ENSAMXG00000034850	-	100	94.554	ENSCAFG00000003187	RAB1A	99	94.554	Canis_familiaris
ENSAMXG00000034850	-	100	94.554	ENSCAFG00020026971	RAB1A	99	94.554	Canis_lupus_dingo
ENSAMXG00000034850	-	98	94.416	ENSCHIG00000014060	RAB1A	100	91.707	Capra_hircus
ENSAMXG00000034850	-	100	93.069	ENSTSYG00000005996	RAB1A	100	94.416	Carlito_syrichta
ENSAMXG00000034850	-	100	94.554	ENSCPOG00000015437	RAB1A	99	94.554	Cavia_porcellus
ENSAMXG00000034850	-	100	94.554	ENSCCAG00000021869	RAB1A	99	94.554	Cebus_capucinus
ENSAMXG00000034850	-	100	94.554	ENSCATG00000030853	RAB1A	99	94.554	Cercocebus_atys
ENSAMXG00000034850	-	100	94.554	ENSCLAG00000014766	RAB1A	99	94.554	Chinchilla_lanigera
ENSAMXG00000034850	-	100	94.554	ENSCPBG00000013243	RAB1A	99	94.554	Chrysemys_picta_bellii
ENSAMXG00000034850	-	100	92.079	ENSCANG00000035916	RAB1A	99	92.079	Colobus_angolensis_palliatus
ENSAMXG00000034850	-	100	94.554	ENSCGRG00001012691	-	99	94.554	Cricetulus_griseus_chok1gshd
ENSAMXG00000034850	-	100	94.554	ENSCGRG00000008456	-	99	94.554	Cricetulus_griseus_crigri
ENSAMXG00000034850	-	100	94.554	ENSDNOG00000018236	RAB1A	99	94.554	Dasypus_novemcinctus
ENSAMXG00000034850	-	100	94.554	ENSDORG00000028628	-	99	94.554	Dipodomys_ordii
ENSAMXG00000034850	-	100	82.759	FBgn0285937	Rab1	99	82.759	Drosophila_melanogaster
ENSAMXG00000034850	-	100	94.554	ENSETEG00000002205	RAB1A	100	94.554	Echinops_telfairi
ENSAMXG00000034850	-	100	94.554	ENSEASG00005007298	RAB1A	99	94.554	Equus_asinus_asinus
ENSAMXG00000034850	-	100	94.554	ENSECAG00000009926	RAB1A	99	94.554	Equus_caballus
ENSAMXG00000034850	-	100	94.554	ENSEEUG00000011721	RAB1A	100	94.554	Erinaceus_europaeus
ENSAMXG00000034850	-	100	93.627	ENSELUG00000012166	RAB1A	96	93.627	Esox_lucius
ENSAMXG00000034850	-	100	94.554	ENSFCAG00000002536	RAB1A	99	94.554	Felis_catus
ENSAMXG00000034850	-	100	92.574	ENSFALG00000013624	RAB1A	99	92.574	Ficedula_albicollis
ENSAMXG00000034850	-	100	94.554	ENSFDAG00000019505	-	99	94.554	Fukomys_damarensis
ENSAMXG00000034850	-	100	93.069	ENSFHEG00000014414	-	100	93.069	Fundulus_heteroclitus
ENSAMXG00000034850	-	100	94.554	ENSGALG00000031582	RAB1A	99	94.554	Gallus_gallus
ENSAMXG00000034850	-	100	92.574	ENSGAFG00000000918	-	100	92.574	Gambusia_affinis
ENSAMXG00000034850	-	100	94.554	ENSGAGG00000006802	RAB1A	99	94.554	Gopherus_agassizii
ENSAMXG00000034850	-	100	94.554	ENSGGOG00000026603	RAB1A	99	94.554	Gorilla_gorilla
ENSAMXG00000034850	-	100	94.554	ENSHGLG00000013585	RAB1A	99	94.554	Heterocephalus_glaber_female
ENSAMXG00000034850	-	100	93.069	ENSHGLG00100007994	RAB1A	99	93.069	Heterocephalus_glaber_male
ENSAMXG00000034850	-	100	94.554	ENSSTOG00000020693	-	99	94.554	Ictidomys_tridecemlineatus
ENSAMXG00000034850	-	98	94.416	ENSJJAG00000014396	Rab1a	100	94.416	Jaculus_jaculus
ENSAMXG00000034850	-	98	92.386	ENSKMAG00000014038	-	93	92.386	Kryptolebias_marmoratus
ENSAMXG00000034850	-	100	92.079	ENSLBEG00000028426	RAB1A	100	92.079	Labrus_bergylta
ENSAMXG00000034850	-	100	94.554	ENSLACG00000012869	RAB1A	99	94.554	Latimeria_chalumnae
ENSAMXG00000034850	-	100	94.554	ENSLAFG00000016666	RAB1A	99	94.554	Loxodonta_africana
ENSAMXG00000034850	-	100	94.554	ENSMFAG00000046246	RAB1A	99	94.554	Macaca_fascicularis
ENSAMXG00000034850	-	98	94.416	ENSMMUG00000021721	RAB1A	91	94.416	Macaca_mulatta
ENSAMXG00000034850	-	95	94.764	ENSMNEG00000028414	-	96	94.764	Macaca_nemestrina
ENSAMXG00000034850	-	100	94.554	ENSMLEG00000042535	RAB1A	99	94.554	Mandrillus_leucophaeus
ENSAMXG00000034850	-	100	93.069	ENSMZEG00005013959	-	100	93.069	Maylandia_zebra
ENSAMXG00000034850	-	98	94.416	ENSMGAG00000004611	RAB1A	98	94.416	Meleagris_gallopavo
ENSAMXG00000034850	-	100	94.059	ENSMAUG00000012156	Rab1a	99	94.059	Mesocricetus_auratus
ENSAMXG00000034850	-	100	94.554	ENSMICG00000012587	RAB1A	99	94.554	Microcebus_murinus
ENSAMXG00000034850	-	100	94.059	ENSMOCG00000017022	Rab1a	99	94.059	Microtus_ochrogaster
ENSAMXG00000034850	-	100	92.079	ENSMMOG00000018709	RAB1A	100	92.079	Mola_mola
ENSAMXG00000034850	-	100	94.554	ENSMODG00000003340	RAB1A	99	94.554	Monodelphis_domestica
ENSAMXG00000034850	-	100	94.554	MGP_CAROLIEiJ_G0016115	Rab1a	99	94.554	Mus_caroli
ENSAMXG00000034850	-	100	94.554	ENSMUSG00000020149	Rab1a	100	94.554	Mus_musculus
ENSAMXG00000034850	-	100	94.554	MGP_PahariEiJ_G0016776	Rab1a	99	94.554	Mus_pahari
ENSAMXG00000034850	-	100	94.554	MGP_SPRETEiJ_G0016958	Rab1a	100	94.554	Mus_spretus
ENSAMXG00000034850	-	100	94.554	ENSMPUG00000006139	RAB1A	80	94.554	Mustela_putorius_furo
ENSAMXG00000034850	-	100	94.554	ENSMLUG00000009489	RAB1A	99	94.554	Myotis_lucifugus
ENSAMXG00000034850	-	100	94.554	ENSNGAG00000005838	Rab1a	99	94.554	Nannospalax_galili
ENSAMXG00000034850	-	100	93.069	ENSNBRG00000020492	-	100	93.069	Neolamprologus_brichardi
ENSAMXG00000034850	-	98	94.416	ENSOPRG00000006595	RAB1A	100	94.416	Ochotona_princeps
ENSAMXG00000034850	-	94	94.180	ENSODEG00000011248	-	96	94.271	Octodon_degus
ENSAMXG00000034850	-	100	91.089	ENSONIG00000006819	-	99	91.089	Oreochromis_niloticus
ENSAMXG00000034850	-	100	94.554	ENSOANG00000012438	RAB1A	99	94.554	Ornithorhynchus_anatinus
ENSAMXG00000034850	-	100	94.554	ENSOCUG00000017003	RAB1A	99	94.554	Oryctolagus_cuniculus
ENSAMXG00000034850	-	100	94.554	ENSOGAG00000026181	RAB1A	99	94.554	Otolemur_garnettii
ENSAMXG00000034850	-	98	94.416	ENSOARG00000019997	RAB1A	97	94.416	Ovis_aries
ENSAMXG00000034850	-	100	94.554	ENSPPAG00000030253	RAB1A	100	94.554	Pan_paniscus
ENSAMXG00000034850	-	100	94.554	ENSPPRG00000025077	RAB1A	99	94.554	Panthera_pardus
ENSAMXG00000034850	-	98	94.416	ENSPTIG00000013471	RAB1A	97	94.416	Panthera_tigris_altaica
ENSAMXG00000034850	-	100	94.554	ENSPTRG00000011989	RAB1A	99	94.554	Pan_troglodytes
ENSAMXG00000034850	-	100	94.554	ENSPANG00000010485	RAB1A	99	94.554	Papio_anubis
ENSAMXG00000034850	-	100	92.079	ENSPSIG00000008028	RAB1A	99	92.079	Pelodiscus_sinensis
ENSAMXG00000034850	-	100	93.069	ENSPMGG00000021015	-	99	93.069	Periophthalmus_magnuspinnatus
ENSAMXG00000034850	-	100	94.554	ENSPEMG00000009340	Rab1a	99	94.554	Peromyscus_maniculatus_bairdii
ENSAMXG00000034850	-	100	94.554	ENSPCIG00000023212	RAB1A	99	94.554	Phascolarctos_cinereus
ENSAMXG00000034850	-	100	92.079	ENSPFOG00000000498	-	98	92.079	Poecilia_formosa
ENSAMXG00000034850	-	100	92.079	ENSPLAG00000015592	-	100	92.079	Poecilia_latipinna
ENSAMXG00000034850	-	100	92.079	ENSPMEG00000005288	-	100	92.079	Poecilia_mexicana
ENSAMXG00000034850	-	100	94.554	ENSPPYG00000012360	RAB1A	99	94.554	Pongo_abelii
ENSAMXG00000034850	-	100	94.554	ENSPCOG00000017244	RAB1A	99	94.554	Propithecus_coquereli
ENSAMXG00000034850	-	100	93.069	ENSPNYG00000015841	-	100	93.069	Pundamilia_nyererei
ENSAMXG00000034850	-	100	94.554	ENSRNOG00000004992	Rab1a	99	94.554	Rattus_norvegicus
ENSAMXG00000034850	-	100	94.554	ENSSBOG00000023732	RAB1A	99	94.554	Saimiri_boliviensis_boliviensis
ENSAMXG00000034850	-	98	94.416	ENSSHAG00000003597	RAB1A	98	93.035	Sarcophilus_harrisii
ENSAMXG00000034850	-	100	92.574	ENSSMAG00000021049	-	100	92.574	Scophthalmus_maximus
ENSAMXG00000034850	-	100	93.069	ENSSDUG00000022535	RAB1A	100	93.069	Seriola_dumerili
ENSAMXG00000034850	-	100	94.554	ENSSPUG00000012822	RAB1A	99	94.554	Sphenodon_punctatus
ENSAMXG00000034850	-	100	92.574	ENSSPAG00000012564	-	100	92.574	Stegastes_partitus
ENSAMXG00000034850	-	100	94.554	ENSSSCG00000008359	RAB1A	100	94.416	Sus_scrofa
ENSAMXG00000034850	-	100	92.574	ENSTGUG00000002328	RAB1A	99	92.574	Taeniopygia_guttata
ENSAMXG00000034850	-	100	92.079	ENSTRUG00000024994	RAB1A	100	92.079	Takifugu_rubripes
ENSAMXG00000034850	-	98	94.416	ENSUMAG00000021038	RAB1A	99	94.416	Ursus_maritimus
ENSAMXG00000034850	-	98	93.939	ENSVPAG00000005640	RAB1A	99	93.939	Vicugna_pacos
ENSAMXG00000034850	-	100	94.554	ENSVVUG00000027588	RAB1A	99	94.554	Vulpes_vulpes
ENSAMXG00000034850	-	100	92.574	ENSXMAG00000015776	-	100	92.574	Xiphophorus_maculatus