EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035044 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2637 bases
Position: chrAPWO02001941.1:155297-157933
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000030784	zf-CCHC	PF00098.23	3.6e-09	1	2
ENSAMXP00000030784	zf-CCHC	PF00098.23	3.6e-09	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000047863	-	1071	-	ENSAMXP00000030784	356 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000035044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035044's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035044	-	68	63.525	ENSAMXG00000040142	-	65	63.525
ENSAMXG00000035044	-	72	54.651	ENSAMXG00000040095	-	73	54.651
ENSAMXG00000035044	-	63	57.778	ENSAMXG00000037658	-	67	57.778
ENSAMXG00000035044	-	73	55.805	ENSAMXG00000029829	-	65	55.805

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035044	-	65	30.213	ENSG00000247315	ZCCHC3	58	30.213	Homo_sapiens
ENSAMXG00000035044	-	65	30.213	ENSAMEG00000013999	ZCCHC3	76	30.213	Ailuropoda_melanoleuca
ENSAMXG00000035044	-	65	30.213	ENSANAG00000013484	ZCCHC3	59	30.213	Aotus_nancymaae
ENSAMXG00000035044	-	64	49.356	ENSACLG00000026211	-	50	49.356	Astatotilapia_calliptera
ENSAMXG00000035044	-	65	30.213	ENSBTAG00000002116	ZCCHC3	58	30.213	Bos_taurus
ENSAMXG00000035044	-	65	30.213	ENSCJAG00000020839	ZCCHC3	58	30.213	Callithrix_jacchus
ENSAMXG00000035044	-	62	31.111	ENSCAFG00000025206	ZCCHC3	80	31.111	Canis_familiaris
ENSAMXG00000035044	-	62	31.111	ENSCAFG00020004076	ZCCHC3	58	30.213	Canis_lupus_dingo
ENSAMXG00000035044	-	62	31.111	ENSCHIG00000009882	ZCCHC3	58	30.213	Capra_hircus
ENSAMXG00000035044	-	62	31.111	ENSCPOG00000023974	ZCCHC3	57	31.111	Cavia_porcellus
ENSAMXG00000035044	-	62	31.111	ENSCCAG00000016869	ZCCHC3	56	31.111	Cebus_capucinus
ENSAMXG00000035044	-	62	31.111	ENSCATG00000022200	ZCCHC3	56	31.111	Cercocebus_atys
ENSAMXG00000035044	-	65	30.638	ENSCLAG00000000269	ZCCHC3	59	30.638	Chinchilla_lanigera
ENSAMXG00000035044	-	62	31.111	ENSCSAG00000018761	ZCCHC3	56	31.111	Chlorocebus_sabaeus
ENSAMXG00000035044	-	62	30.667	ENSCANG00000010812	ZCCHC3	82	30.667	Colobus_angolensis_palliatus
ENSAMXG00000035044	-	65	30.638	ENSCGRG00001011895	-	65	30.638	Cricetulus_griseus_chok1gshd
ENSAMXG00000035044	-	65	30.638	ENSCGRG00001009163	-	59	30.638	Cricetulus_griseus_chok1gshd
ENSAMXG00000035044	-	65	30.638	ENSCGRG00000008273	-	65	30.638	Cricetulus_griseus_crigri
ENSAMXG00000035044	-	62	31.111	ENSDNOG00000047357	ZCCHC3	58	30.213	Dasypus_novemcinctus
ENSAMXG00000035044	-	62	31.111	ENSEASG00005003629	ZCCHC3	58	30.638	Equus_asinus_asinus
ENSAMXG00000035044	-	62	31.111	ENSECAG00000001035	ZCCHC3	58	30.638	Equus_caballus
ENSAMXG00000035044	-	60	30.909	ENSELUG00000017799	-	71	30.909	Esox_lucius
ENSAMXG00000035044	-	65	30.213	ENSFCAG00000026760	ZCCHC3	58	30.213	Felis_catus
ENSAMXG00000035044	-	51	31.183	ENSGGOG00000044213	ZCCHC3	57	31.183	Gorilla_gorilla
ENSAMXG00000035044	-	64	50.431	ENSHBUG00000005879	-	85	50.431	Haplochromis_burtoni
ENSAMXG00000035044	-	62	31.111	ENSHGLG00000019351	ZCCHC3	56	31.111	Heterocephalus_glaber_female
ENSAMXG00000035044	-	62	31.081	ENSHGLG00100009699	ZCCHC3	64	31.081	Heterocephalus_glaber_male
ENSAMXG00000035044	-	62	30.667	ENSJJAG00000020375	Zcchc3	58	31.064	Jaculus_jaculus
ENSAMXG00000035044	-	56	30.000	ENSLACG00000000032	-	58	30.000	Latimeria_chalumnae
ENSAMXG00000035044	-	58	33.488	ENSLACG00000022551	-	54	33.488	Latimeria_chalumnae
ENSAMXG00000035044	-	62	31.111	ENSMFAG00000044780	ZCCHC3	56	31.111	Macaca_fascicularis
ENSAMXG00000035044	-	62	31.111	ENSMMUG00000038935	ZCCHC3	56	31.111	Macaca_mulatta
ENSAMXG00000035044	-	62	31.111	ENSMNEG00000000405	ZCCHC3	56	31.111	Macaca_nemestrina
ENSAMXG00000035044	-	61	52.252	ENSMZEG00005021211	-	56	52.252	Maylandia_zebra
ENSAMXG00000035044	-	65	30.213	ENSMICG00000031267	ZCCHC3	59	30.213	Microcebus_murinus
ENSAMXG00000035044	-	65	31.064	ENSMOCG00000002870	Zcchc3	59	31.064	Microtus_ochrogaster
ENSAMXG00000035044	-	63	49.561	ENSMMOG00000004516	-	69	49.561	Mola_mola
ENSAMXG00000035044	-	65	30.638	MGP_CAROLIEiJ_G0024454	Zcchc3	59	30.638	Mus_caroli
ENSAMXG00000035044	-	65	30.638	ENSMUSG00000074682	Zcchc3	59	30.638	Mus_musculus
ENSAMXG00000035044	-	65	30.638	MGP_PahariEiJ_G0025898	Zcchc3	59	30.638	Mus_pahari
ENSAMXG00000035044	-	65	30.638	MGP_SPRETEiJ_G0025375	Zcchc3	59	30.638	Mus_spretus
ENSAMXG00000035044	-	65	30.638	ENSNGAG00000006074	Zcchc3	60	30.638	Nannospalax_galili
ENSAMXG00000035044	-	64	30.472	ENSNLEG00000009533	ZCCHC3	57	30.472	Nomascus_leucogenys
ENSAMXG00000035044	-	62	31.111	ENSOPRG00000005081	ZCCHC3	57	30.213	Ochotona_princeps
ENSAMXG00000035044	-	63	30.702	ENSODEG00000010730	ZCCHC3	58	31.064	Octodon_degus
ENSAMXG00000035044	-	64	30.603	ENSOCUG00000017024	ZCCHC3	61	30.603	Oryctolagus_cuniculus
ENSAMXG00000035044	-	62	31.111	ENSOGAG00000025208	ZCCHC3	58	30.213	Otolemur_garnettii
ENSAMXG00000035044	-	62	31.111	ENSOARG00000019161	ZCCHC3	82	30.213	Ovis_aries
ENSAMXG00000035044	-	62	31.111	ENSPPAG00000010453	-	89	30.213	Pan_paniscus
ENSAMXG00000035044	-	65	30.213	ENSPPRG00000014724	ZCCHC3	58	30.213	Panthera_pardus
ENSAMXG00000035044	-	59	30.952	ENSPTIG00000009393	ZCCHC3	86	30.952	Panthera_tigris_altaica
ENSAMXG00000035044	-	62	31.111	ENSPTRG00000047645	ZCCHC3	58	30.213	Pan_troglodytes
ENSAMXG00000035044	-	62	31.111	ENSPANG00000013450	ZCCHC3	56	31.111	Papio_anubis
ENSAMXG00000035044	-	65	30.638	ENSPEMG00000009059	Zcchc3	59	30.638	Peromyscus_maniculatus_bairdii
ENSAMXG00000035044	-	65	30.213	ENSPCOG00000012289	ZCCHC3	59	30.213	Propithecus_coquereli
ENSAMXG00000035044	-	65	30.213	ENSPVAG00000000182	ZCCHC3	58	30.213	Pteropus_vampyrus
ENSAMXG00000035044	-	65	30.638	ENSRNOG00000007520	Zcchc3	59	30.638	Rattus_norvegicus
ENSAMXG00000035044	-	62	31.111	ENSRBIG00000029757	ZCCHC3	56	31.111	Rhinopithecus_bieti
ENSAMXG00000035044	-	62	31.111	ENSRROG00000005210	ZCCHC3	56	31.111	Rhinopithecus_roxellana
ENSAMXG00000035044	-	62	31.111	ENSSSCG00000007211	ZCCHC3	56	31.111	Sus_scrofa
ENSAMXG00000035044	-	65	30.213	ENSTTRG00000008511	ZCCHC3	58	30.213	Tursiops_truncatus
ENSAMXG00000035044	-	65	30.213	ENSUAMG00000023407	ZCCHC3	59	30.213	Ursus_americanus
ENSAMXG00000035044	-	59	30.047	ENSVPAG00000011267	-	87	30.047	Vicugna_pacos
ENSAMXG00000035044	-	51	32.787	ENSXETG00000034004	-	96	32.787	Xenopus_tropicalis
ENSAMXG00000035044	-	50	33.889	ENSXETG00000032402	-	94	33.889	Xenopus_tropicalis
ENSAMXG00000035044	-	51	33.333	ENSXETG00000033661	-	96	33.333	Xenopus_tropicalis
ENSAMXG00000035044	-	50	33.702	ENSXETG00000032297	-	95	33.702	Xenopus_tropicalis
ENSAMXG00000035044	-	65	30.213	ENSXETG00000033341	-	97	31.579	Xenopus_tropicalis
ENSAMXG00000035044	-	51	33.333	ENSXETG00000033553	-	96	33.333	Xenopus_tropicalis
ENSAMXG00000035044	-	50	33.889	ENSXETG00000031282	-	95	33.889	Xenopus_tropicalis
ENSAMXG00000035044	-	51	33.333	ENSXETG00000034120	-	96	33.333	Xenopus_tropicalis
ENSAMXG00000035044	-	61	30.631	ENSXETG00000005590	-	74	30.631	Xenopus_tropicalis
ENSAMXG00000035044	-	51	32.240	ENSXETG00000030911	-	96	32.240	Xenopus_tropicalis
ENSAMXG00000035044	-	50	32.597	ENSXETG00000031539	-	95	32.597	Xenopus_tropicalis
ENSAMXG00000035044	-	51	33.333	ENSXETG00000033566	-	96	33.333	Xenopus_tropicalis
ENSAMXG00000035044	-	83	30.592	ENSXCOG00000010666	-	78	30.592	Xiphophorus_couchianus