EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035090 (Gene tree)
Gene ID: 103029596
Gene Symbol: -
Alias: -
Full Name: oocyte zinc finger protein XlCOF6-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 7208 bases
Position: chr22:27283293-27290500
Accession: 103029596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000036836	zf-C2H2	PF00096.26	1.3e-18	1	4
ENSAMXP00000036836	zf-C2H2	PF00096.26	1.3e-18	2	4
ENSAMXP00000036836	zf-C2H2	PF00096.26	1.3e-18	3	4
ENSAMXP00000036836	zf-C2H2	PF00096.26	1.3e-18	4	4
ENSAMXP00000036836	zf-met	PF12874.7	2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000054655	-	6016	XM_007247733	ENSAMXP00000036836	335 (aa)	XP_007247795	UPI000BBDEAF7

Gene Model

Click here to download ENSAMXG00000035090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035090	-	81	35.385	ENSAMXG00000037382	-	66	35.593
ENSAMXG00000035090	-	53	40.000	ENSAMXG00000031844	-	91	40.000
ENSAMXG00000035090	-	70	30.290	ENSAMXG00000034158	scrt2	78	30.290
ENSAMXG00000035090	-	50	37.063	ENSAMXG00000031307	-	66	37.063
ENSAMXG00000035090	-	51	39.706	ENSAMXG00000006669	GFI1	66	39.706
ENSAMXG00000035090	-	50	43.056	ENSAMXG00000035145	-	59	43.056
ENSAMXG00000035090	-	53	41.353	ENSAMXG00000036762	-	96	41.353
ENSAMXG00000035090	-	54	31.081	ENSAMXG00000039622	zbtb41	50	34.188
ENSAMXG00000035090	-	56	41.353	ENSAMXG00000010930	-	81	41.353
ENSAMXG00000035090	-	65	41.353	ENSAMXG00000042174	-	91	41.353
ENSAMXG00000035090	-	50	42.857	ENSAMXG00000042746	-	87	42.857
ENSAMXG00000035090	-	53	43.396	ENSAMXG00000040677	-	80	43.396
ENSAMXG00000035090	-	57	36.090	ENSAMXG00000035246	-	77	36.090
ENSAMXG00000035090	-	99	32.836	ENSAMXG00000037699	-	95	33.923
ENSAMXG00000035090	-	50	40.602	ENSAMXG00000034958	-	97	40.602
ENSAMXG00000035090	-	53	46.552	ENSAMXG00000007092	-	98	46.552
ENSAMXG00000035090	-	56	40.690	ENSAMXG00000042938	-	88	40.690
ENSAMXG00000035090	-	53	41.353	ENSAMXG00000026142	-	94	41.353
ENSAMXG00000035090	-	50	42.336	ENSAMXG00000026143	-	93	42.336
ENSAMXG00000035090	-	55	41.228	ENSAMXG00000034344	-	73	41.228
ENSAMXG00000035090	-	64	39.259	ENSAMXG00000038284	-	92	39.416
ENSAMXG00000035090	-	53	40.984	ENSAMXG00000039004	-	88	40.984
ENSAMXG00000035090	-	59	38.346	ENSAMXG00000032619	-	98	38.346
ENSAMXG00000035090	-	52	40.860	ENSAMXG00000041862	-	95	40.860
ENSAMXG00000035090	-	59	41.481	ENSAMXG00000044110	-	89	41.481
ENSAMXG00000035090	-	50	42.105	ENSAMXG00000007973	-	93	37.681
ENSAMXG00000035090	-	50	41.221	ENSAMXG00000036257	-	92	41.221
ENSAMXG00000035090	-	58	40.000	ENSAMXG00000040630	-	92	46.774
ENSAMXG00000035090	-	50	41.121	ENSAMXG00000035875	-	99	41.121
ENSAMXG00000035090	-	96	36.709	ENSAMXG00000032446	-	92	34.688
ENSAMXG00000035090	-	60	39.850	ENSAMXG00000043423	-	89	39.850
ENSAMXG00000035090	-	51	35.172	ENSAMXG00000029059	-	66	35.172
ENSAMXG00000035090	-	54	35.246	ENSAMXG00000039849	snai1b	64	31.579
ENSAMXG00000035090	-	53	38.971	ENSAMXG00000039600	gfi1ab	56	38.971
ENSAMXG00000035090	-	60	41.905	ENSAMXG00000030742	-	98	41.905
ENSAMXG00000035090	-	53	42.105	ENSAMXG00000009776	-	85	42.105
ENSAMXG00000035090	-	51	42.342	ENSAMXG00000039752	-	93	42.342
ENSAMXG00000035090	-	50	37.342	ENSAMXG00000029660	-	67	36.686
ENSAMXG00000035090	-	50	39.850	ENSAMXG00000025452	-	95	39.850
ENSAMXG00000035090	-	53	40.000	ENSAMXG00000035437	-	97	40.000
ENSAMXG00000035090	-	58	38.406	ENSAMXG00000035127	-	92	43.836
ENSAMXG00000035090	-	50	39.850	ENSAMXG00000031794	-	99	39.850
ENSAMXG00000035090	-	50	43.609	ENSAMXG00000038536	-	87	43.609
ENSAMXG00000035090	-	51	44.000	ENSAMXG00000012604	-	96	44.000
ENSAMXG00000035090	-	53	42.857	ENSAMXG00000010805	-	98	42.857
ENSAMXG00000035090	-	51	39.535	ENSAMXG00000039700	-	95	39.535
ENSAMXG00000035090	-	54	40.602	ENSAMXG00000037717	-	98	40.602
ENSAMXG00000035090	-	58	41.353	ENSAMXG00000033201	-	95	41.353
ENSAMXG00000035090	-	51	36.000	ENSAMXG00000024907	znf319b	72	32.394
ENSAMXG00000035090	-	66	41.284	ENSAMXG00000031489	-	91	41.284
ENSAMXG00000035090	-	51	34.109	ENSAMXG00000043178	-	63	34.109
ENSAMXG00000035090	-	51	41.353	ENSAMXG00000043541	-	83	41.353
ENSAMXG00000035090	-	50	41.606	ENSAMXG00000042784	-	90	43.925
ENSAMXG00000035090	-	65	37.037	ENSAMXG00000033252	-	89	39.640
ENSAMXG00000035090	-	57	38.983	ENSAMXG00000040806	-	88	38.983
ENSAMXG00000035090	-	54	38.346	ENSAMXG00000039770	-	79	38.346
ENSAMXG00000035090	-	51	37.209	ENSAMXG00000032212	-	86	37.209
ENSAMXG00000035090	-	53	38.346	ENSAMXG00000034857	-	95	38.346
ENSAMXG00000035090	-	53	39.098	ENSAMXG00000038324	-	70	39.098

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035090	-	57	33.023	ENSAPOG00000000128	-	64	33.023	Acanthochromis_polyacanthus
ENSAMXG00000035090	-	56	40.000	ENSACIG00000016133	-	75	40.000	Amphilophus_citrinellus
ENSAMXG00000035090	-	95	44.444	ENSATEG00000011202	-	88	44.444	Anabas_testudineus
ENSAMXG00000035090	-	96	41.781	ENSATEG00000024549	-	98	41.781	Anabas_testudineus
ENSAMXG00000035090	-	98	37.805	ENSCVAG00000004508	-	99	37.805	Cyprinodon_variegatus
ENSAMXG00000035090	-	97	44.361	ENSELUG00000008171	-	99	44.361	Esox_lucius
ENSAMXG00000035090	-	97	34.906	ENSFHEG00000018266	-	96	34.906	Fundulus_heteroclitus
ENSAMXG00000035090	-	51	32.749	ENSHBUG00000000731	-	57	34.437	Haplochromis_burtoni
ENSAMXG00000035090	-	97	37.425	ENSIPUG00000024007	-	98	37.425	Ictalurus_punctatus
ENSAMXG00000035090	-	53	43.820	ENSLBEG00000011006	-	53	43.820	Labrus_bergylta
ENSAMXG00000035090	-	95	44.361	ENSLBEG00000026552	-	97	44.361	Labrus_bergylta
ENSAMXG00000035090	-	71	37.778	ENSMAMG00000022152	-	78	37.778	Mastacembelus_armatus
ENSAMXG00000035090	-	51	32.749	ENSMZEG00005004047	-	57	34.437	Maylandia_zebra
ENSAMXG00000035090	-	97	42.748	ENSNBRG00000013838	-	99	42.748	Neolamprologus_brichardi
ENSAMXG00000035090	-	54	39.098	ENSORLG00000025719	-	54	39.098	Oryzias_latipes
ENSAMXG00000035090	-	56	30.120	ENSORLG00020009554	-	78	30.120	Oryzias_latipes_hni
ENSAMXG00000035090	-	54	39.098	ENSORLG00015012599	-	54	39.098	Oryzias_latipes_hsok
ENSAMXG00000035090	-	99	40.602	ENSOMEG00000010906	-	99	40.602	Oryzias_melastigma
ENSAMXG00000035090	-	50	36.641	ENSPLAG00000009651	-	64	42.188	Poecilia_latipinna
ENSAMXG00000035090	-	99	38.849	ENSPREG00000004006	-	85	30.678	Poecilia_reticulata
ENSAMXG00000035090	-	53	43.704	ENSPNYG00000023882	-	84	43.704	Pundamilia_nyererei
ENSAMXG00000035090	-	71	49.533	ENSSPAG00000021940	-	61	49.533	Stegastes_partitus
ENSAMXG00000035090	-	58	42.963	ENSXETG00000002690	-	68	42.963	Xenopus_tropicalis