EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000035125 (Gene tree)
Gene ID: 111194469
Gene Symbol: cwc25
Alias: ccdc49|fc11a02|flj20291l|im:7140273|pate|pte|wu:fc11a02|zgc:55552
Full Name: CWC25 spliceosome associated protein homolog
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 10815 bases
Position: chr17:1207453-1218267
Accession: 111194469
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000029031	CWC25	PF12542.8	6.7e-20	1	1
ENSAMXP00000039716	CWC25	PF12542.8	1.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000035488	-	207	-	ENSAMXP00000029024	68 (aa)	-	-
ENSAMXT00000040564	-	1167	-	ENSAMXP00000039716	388 (aa)	-	-
ENSAMXT00000044366	-	1116	XM_022678626	ENSAMXP00000029031	371 (aa)	XP_022534347	-

Gene Model

Click here to download ENSAMXG00000035125's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035125's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035125	cwc25	80	72.515	ENSAMEG00000004292	CWC25	99	50.000	Ailuropoda_melanoleuca
ENSAMXG00000035125	cwc25	99	64.750	ENSAPEG00000013237	cwc25	99	65.500	Amphiprion_percula
ENSAMXG00000035125	cwc25	99	66.165	ENSATEG00000000799	cwc25	99	66.165	Anabas_testudineus
ENSAMXG00000035125	cwc25	100	45.794	ENSAPLG00000003710	CWC25	99	46.279	Anas_platyrhynchos
ENSAMXG00000035125	cwc25	100	52.246	ENSACAG00000013140	CWC25	99	51.435	Anolis_carolinensis
ENSAMXG00000035125	cwc25	100	49.598	ENSANAG00000033550	CWC25	68	74.648	Aotus_nancymaae
ENSAMXG00000035125	cwc25	99	65.337	ENSACLG00000009352	cwc25	99	65.750	Astatotilapia_calliptera
ENSAMXG00000035125	cwc25	99	49.417	ENSBTAG00000030591	CWC25	86	74.825	Bos_taurus
ENSAMXG00000035125	cwc25	80	72.515	ENSCJAG00000008289	CWC25	99	50.234	Callithrix_jacchus
ENSAMXG00000035125	cwc25	100	49.765	ENSCAFG00000016561	CWC25	99	49.881	Canis_familiaris
ENSAMXG00000035125	cwc25	100	49.765	ENSCAFG00020023017	CWC25	99	49.881	Canis_lupus_dingo
ENSAMXG00000035125	cwc25	99	49.417	ENSCHIG00000015063	CWC25	99	50.234	Capra_hircus
ENSAMXG00000035125	cwc25	99	50.839	ENSCAPG00000014542	CWC25	98	51.923	Cavia_aperea
ENSAMXG00000035125	cwc25	99	51.961	ENSCPOG00000015127	CWC25	99	51.478	Cavia_porcellus
ENSAMXG00000035125	cwc25	99	48.478	ENSCCAG00000028719	CWC25	99	49.883	Cebus_capucinus
ENSAMXG00000035125	cwc25	99	49.652	ENSCLAG00000017102	CWC25	93	71.429	Chinchilla_lanigera
ENSAMXG00000035125	cwc25	100	50.118	ENSCSAG00000002654	CWC25	99	50.469	Chlorocebus_sabaeus
ENSAMXG00000035125	cwc25	99	51.288	ENSCPBG00000027490	CWC25	88	50.585	Chrysemys_picta_bellii
ENSAMXG00000035125	cwc25	100	60.976	ENSCSEG00000016305	cwc25	99	62.990	Cynoglossus_semilaevis
ENSAMXG00000035125	cwc25	99	62.720	ENSCVAG00000007828	cwc25	100	64.925	Cyprinodon_variegatus
ENSAMXG00000035125	cwc25	99	76.336	ENSDARG00000003382	cwc25	98	77.099	Danio_rerio
ENSAMXG00000035125	cwc25	72	41.667	FBgn0031452	Cwc25	60	41.667	Drosophila_melanogaster
ENSAMXG00000035125	cwc25	100	44.581	ENSEBUG00000002947	cwc25	88	57.143	Eptatretus_burgeri
ENSAMXG00000035125	cwc25	59	61.304	ENSEASG00005001871	CWC25	99	49.766	Equus_asinus_asinus
ENSAMXG00000035125	cwc25	59	61.304	ENSECAG00000019122	CWC25	99	49.766	Equus_caballus
ENSAMXG00000035125	cwc25	99	64.390	ENSELUG00000009127	cwc25	99	65.366	Esox_lucius
ENSAMXG00000035125	cwc25	59	60.000	ENSFCAG00000028119	CWC25	99	49.065	Felis_catus
ENSAMXG00000035125	cwc25	100	43.187	ENSFALG00000013293	CWC25	99	44.342	Ficedula_albicollis
ENSAMXG00000035125	cwc25	99	49.144	ENSFDAG00000007745	CWC25	100	51.095	Fukomys_damarensis
ENSAMXG00000035125	cwc25	99	64.987	ENSFHEG00000004754	cwc25	100	64.677	Fundulus_heteroclitus
ENSAMXG00000035125	cwc25	79	85.526	ENSGMOG00000013001	cwc25	72	86.145	Gadus_morhua
ENSAMXG00000035125	cwc25	99	49.526	ENSGALG00000001624	CWC25	99	50.119	Gallus_gallus
ENSAMXG00000035125	cwc25	100	62.283	ENSGAFG00000007492	cwc25	100	64.268	Gambusia_affinis
ENSAMXG00000035125	cwc25	99	59.189	ENSGACG00000018153	cwc25	99	59.905	Gasterosteus_aculeatus
ENSAMXG00000035125	cwc25	100	51.628	ENSGAGG00000022972	CWC25	99	50.704	Gopherus_agassizii
ENSAMXG00000035125	cwc25	99	64.912	ENSHBUG00000001392	cwc25	99	66.416	Haplochromis_burtoni
ENSAMXG00000035125	cwc25	99	51.675	ENSHGLG00000014785	CWC25	99	51.914	Heterocephalus_glaber_female
ENSAMXG00000035125	cwc25	99	50.962	ENSHGLG00100017354	CWC25	99	50.000	Heterocephalus_glaber_male
ENSAMXG00000035125	cwc25	100	61.139	ENSHCOG00000002434	cwc25	100	61.386	Hippocampus_comes
ENSAMXG00000035125	cwc25	99	75.888	ENSIPUG00000012581	CWC25	100	71.320	Ictalurus_punctatus
ENSAMXG00000035125	cwc25	80	72.515	ENSSTOG00000014268	CWC25	99	50.701	Ictidomys_tridecemlineatus
ENSAMXG00000035125	cwc25	99	62.217	ENSKMAG00000015418	cwc25	98	63.980	Kryptolebias_marmoratus
ENSAMXG00000035125	cwc25	85	45.646	ENSLACG00000001743	CWC25	99	44.186	Latimeria_chalumnae
ENSAMXG00000035125	cwc25	99	54.632	ENSLOCG00000013707	cwc25	99	55.422	Lepisosteus_oculatus
ENSAMXG00000035125	cwc25	85	44.595	ENSMFAG00000002357	CWC25	100	45.676	Macaca_fascicularis
ENSAMXG00000035125	cwc25	85	44.595	ENSMMUG00000002944	CWC25	90	45.676	Macaca_mulatta
ENSAMXG00000035125	cwc25	99	49.065	ENSMNEG00000033729	CWC25	99	50.000	Macaca_nemestrina
ENSAMXG00000035125	cwc25	71	72.515	ENSMLEG00000033355	CWC25	98	47.692	Mandrillus_leucophaeus
ENSAMXG00000035125	cwc25	99	64.962	ENSMAMG00000005194	cwc25	100	66.667	Mastacembelus_armatus
ENSAMXG00000035125	cwc25	99	65.337	ENSMZEG00005012421	cwc25	99	65.750	Maylandia_zebra
ENSAMXG00000035125	cwc25	99	48.694	ENSMGAG00000005158	CWC25	99	49.522	Meleagris_gallopavo
ENSAMXG00000035125	cwc25	59	61.304	ENSMICG00000003004	CWC25	99	50.701	Microcebus_murinus
ENSAMXG00000035125	cwc25	77	72.515	ENSMOCG00000000224	Cwc25	99	50.952	Microtus_ochrogaster
ENSAMXG00000035125	cwc25	99	49.764	ENSMODG00000012627	CWC25	99	50.591	Monodelphis_domestica
ENSAMXG00000035125	cwc25	100	64.268	ENSMALG00000005638	cwc25	100	63.275	Monopterus_albus
ENSAMXG00000035125	cwc25	99	51.707	MGP_CAROLIEiJ_G0017064	Cwc25	99	51.951	Mus_caroli
ENSAMXG00000035125	cwc25	99	50.597	ENSMUSG00000018541	Cwc25	99	50.360	Mus_musculus
ENSAMXG00000035125	cwc25	99	51.551	MGP_PahariEiJ_G0018193	Cwc25	99	50.600	Mus_pahari
ENSAMXG00000035125	cwc25	99	50.358	MGP_SPRETEiJ_G0017910	Cwc25	79	74.825	Mus_spretus
ENSAMXG00000035125	cwc25	99	48.122	ENSMPUG00000015077	CWC25	99	50.467	Mustela_putorius_furo
ENSAMXG00000035125	cwc25	99	49.533	ENSMLUG00000029653	CWC25	99	50.115	Myotis_lucifugus
ENSAMXG00000035125	cwc25	84	73.099	ENSNGAG00000007394	Cwc25	99	49.296	Nannospalax_galili
ENSAMXG00000035125	cwc25	99	48.821	ENSMEUG00000004156	CWC25	100	50.236	Notamacropus_eugenii
ENSAMXG00000035125	cwc25	99	52.228	ENSODEG00000017487	CWC25	99	52.812	Octodon_degus
ENSAMXG00000035125	cwc25	99	64.356	ENSONIG00000003251	cwc25	99	65.920	Oreochromis_niloticus
ENSAMXG00000035125	cwc25	70	71.930	ENSOANG00000001231	-	68	71.930	Ornithorhynchus_anatinus
ENSAMXG00000035125	cwc25	99	47.418	ENSOCUG00000013906	CWC25	99	49.299	Oryctolagus_cuniculus
ENSAMXG00000035125	cwc25	100	62.183	ENSORLG00000018569	cwc25	100	63.452	Oryzias_latipes
ENSAMXG00000035125	cwc25	100	64.010	ENSORLG00020012087	cwc25	100	62.850	Oryzias_latipes_hni
ENSAMXG00000035125	cwc25	100	62.944	ENSORLG00015011062	cwc25	100	63.452	Oryzias_latipes_hsok
ENSAMXG00000035125	cwc25	100	61.637	ENSOMEG00000019365	cwc25	100	65.228	Oryzias_melastigma
ENSAMXG00000035125	cwc25	99	52.513	ENSOGAG00000008785	CWC25	100	51.899	Otolemur_garnettii
ENSAMXG00000035125	cwc25	59	61.304	ENSOARG00000009937	CWC25	99	50.234	Ovis_aries
ENSAMXG00000035125	cwc25	99	49.299	ENSPPRG00000005029	CWC25	99	49.065	Panthera_pardus
ENSAMXG00000035125	cwc25	99	49.299	ENSPTIG00000020264	CWC25	99	49.065	Panthera_tigris_altaica
ENSAMXG00000035125	cwc25	99	49.065	ENSPANG00000022017	CWC25	99	50.000	Papio_anubis
ENSAMXG00000035125	cwc25	100	60.804	ENSPKIG00000007116	cwc25	99	61.069	Paramormyrops_kingsleyae
ENSAMXG00000035125	cwc25	88	45.526	ENSPSIG00000011817	CWC25	100	45.932	Pelodiscus_sinensis
ENSAMXG00000035125	cwc25	99	50.118	ENSPCIG00000002943	CWC25	99	50.236	Phascolarctos_cinereus
ENSAMXG00000035125	cwc25	100	62.069	ENSPFOG00000017152	cwc25	100	65.012	Poecilia_formosa
ENSAMXG00000035125	cwc25	97	62.113	ENSPLAG00000004535	cwc25	100	65.195	Poecilia_latipinna
ENSAMXG00000035125	cwc25	99	62.814	ENSPMEG00000023752	cwc25	100	65.012	Poecilia_mexicana
ENSAMXG00000035125	cwc25	99	48.341	ENSPPYG00000008503	CWC25	99	49.766	Pongo_abelii
ENSAMXG00000035125	cwc25	65	71.515	ENSPCAG00000000433	CWC25	97	47.619	Procavia_capensis
ENSAMXG00000035125	cwc25	59	61.304	ENSPCOG00000023678	CWC25	99	50.000	Propithecus_coquereli
ENSAMXG00000035125	cwc25	99	50.234	ENSPVAG00000002273	CWC25	100	49.766	Pteropus_vampyrus
ENSAMXG00000035125	cwc25	99	84.694	ENSPNAG00000028668	cwc25	98	84.694	Pygocentrus_nattereri
ENSAMXG00000035125	cwc25	100	51.442	ENSRNOG00000004091	Cwc25	99	50.119	Rattus_norvegicus
ENSAMXG00000035125	cwc25	100	49.065	ENSRBIG00000033457	CWC25	99	49.423	Rhinopithecus_bieti
ENSAMXG00000035125	cwc25	99	48.832	ENSRROG00000039968	CWC25	99	49.423	Rhinopithecus_roxellana
ENSAMXG00000035125	cwc25	99	49.409	ENSSHAG00000017267	CWC25	99	48.931	Sarcophilus_harrisii
ENSAMXG00000035125	cwc25	100	63.990	ENSSFOG00015003449	cwc25	98	59.951	Scleropages_formosus
ENSAMXG00000035125	cwc25	100	62.069	ENSSMAG00000010953	cwc25	100	65.025	Scophthalmus_maximus
ENSAMXG00000035125	cwc25	99	65.750	ENSSDUG00000004302	cwc25	100	65.517	Seriola_dumerili
ENSAMXG00000035125	cwc25	99	65.000	ENSSLDG00000005761	cwc25	100	64.778	Seriola_lalandi_dorsalis
ENSAMXG00000035125	cwc25	100	51.991	ENSSPUG00000018024	CWC25	99	52.706	Sphenodon_punctatus
ENSAMXG00000035125	cwc25	80	72.515	ENSSSCG00000021478	CWC25	100	52.882	Sus_scrofa
ENSAMXG00000035125	cwc25	99	46.963	ENSTGUG00000003011	CWC25	100	46.172	Taeniopygia_guttata
ENSAMXG00000035125	cwc25	100	63.846	ENSTRUG00000004650	cwc25	100	64.090	Takifugu_rubripes
ENSAMXG00000035125	cwc25	100	60.250	ENSTNIG00000014143	cwc25	98	61.675	Tetraodon_nigroviridis
ENSAMXG00000035125	cwc25	77	72.500	ENSTBEG00000013187	CWC25	79	71.250	Tupaia_belangeri
ENSAMXG00000035125	cwc25	99	48.826	ENSTTRG00000006662	CWC25	100	50.235	Tursiops_truncatus
ENSAMXG00000035125	cwc25	80	72.515	ENSUAMG00000005592	CWC25	99	49.299	Ursus_americanus
ENSAMXG00000035125	cwc25	80	72.515	ENSUMAG00000017097	CWC25	99	49.299	Ursus_maritimus
ENSAMXG00000035125	cwc25	77	73.418	ENSVPAG00000005680	CWC25	100	45.498	Vicugna_pacos
ENSAMXG00000035125	cwc25	99	49.524	ENSVVUG00000002182	CWC25	99	49.881	Vulpes_vulpes
ENSAMXG00000035125	cwc25	99	55.980	ENSXETG00000023722	cwc25	100	54.839	Xenopus_tropicalis
ENSAMXG00000035125	cwc25	99	63.452	ENSXMAG00000018113	cwc25	100	64.484	Xiphophorus_maculatus