EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000035149 (Gene tree)
Gene ID: 103047337
Gene Symbol: mrpl42
Alias: -
Full Name: mitochondrial ribosomal protein L42
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 23288 bases
Position: chrAPWO02001625.1:14210-37497
Accession: 103047337
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000049896	MRP-S32	PF10210.9	1.6e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000040073	-	3600	XM_022663173	ENSAMXP00000049896	137 (aa)	XP_022518894	UPI000BBD6EC3

Gene Model

Click here to download ENSAMXG00000035149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035149's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035149	mrpl42	79	51.852	ENSAPOG00000010677	mrpl42	75	51.852	Acanthochromis_polyacanthus
ENSAMXG00000035149	mrpl42	85	51.587	ENSAOCG00000011620	mrpl42	88	51.587	Amphiprion_ocellaris
ENSAMXG00000035149	mrpl42	80	52.941	ENSAPEG00000019516	mrpl42	83	52.941	Amphiprion_percula
ENSAMXG00000035149	mrpl42	71	49.485	ENSATEG00000014106	mrpl42	74	49.485	Anabas_testudineus
ENSAMXG00000035149	mrpl42	82	54.867	ENSACAG00000012606	MRPL42	77	54.867	Anolis_carolinensis
ENSAMXG00000035149	mrpl42	94	47.287	ENSACLG00000026856	mrpl42	85	47.287	Astatotilapia_calliptera
ENSAMXG00000035149	mrpl42	85	44.118	ENSCSEG00000010067	mrpl42	96	44.118	Cynoglossus_semilaevis
ENSAMXG00000035149	mrpl42	72	58.163	ENSCVAG00000002612	mrpl42	68	58.163	Cyprinodon_variegatus
ENSAMXG00000035149	mrpl42	100	47.222	ENSDARG00000079391	mrpl42	100	47.222	Danio_rerio
ENSAMXG00000035149	mrpl42	80	37.391	ENSEBUG00000005581	mrpl42	86	37.391	Eptatretus_burgeri
ENSAMXG00000035149	mrpl42	94	50.355	ENSELUG00000001973	mrpl42	94	50.355	Esox_lucius
ENSAMXG00000035149	mrpl42	80	48.760	ENSFHEG00000018696	mrpl42	83	48.760	Fundulus_heteroclitus
ENSAMXG00000035149	mrpl42	71	56.701	ENSGMOG00000002972	mrpl42	100	56.701	Gadus_morhua
ENSAMXG00000035149	mrpl42	75	53.398	ENSGAFG00000018373	mrpl42	69	55.670	Gambusia_affinis
ENSAMXG00000035149	mrpl42	70	58.333	ENSGACG00000018811	mrpl42	99	58.333	Gasterosteus_aculeatus
ENSAMXG00000035149	mrpl42	94	45.736	ENSHBUG00000015960	mrpl42	85	45.736	Haplochromis_burtoni
ENSAMXG00000035149	mrpl42	85	49.206	ENSHCOG00000014046	mrpl42	88	49.206	Hippocampus_comes
ENSAMXG00000035149	mrpl42	100	47.297	ENSIPUG00000015395	mrpl42	100	47.297	Ictalurus_punctatus
ENSAMXG00000035149	mrpl42	79	50.427	ENSKMAG00000013671	mrpl42	82	50.427	Kryptolebias_marmoratus
ENSAMXG00000035149	mrpl42	94	47.143	ENSLBEG00000028618	mrpl42	93	47.143	Labrus_bergylta
ENSAMXG00000035149	mrpl42	53	59.722	ENSLOCG00000015284	mrpl42	57	59.722	Lepisosteus_oculatus
ENSAMXG00000035149	mrpl42	80	55.652	ENSMAMG00000009737	mrpl42	83	55.652	Mastacembelus_armatus
ENSAMXG00000035149	mrpl42	94	47.287	ENSMZEG00005008545	mrpl42	82	47.287	Maylandia_zebra
ENSAMXG00000035149	mrpl42	60	52.439	ENSMMOG00000002317	mrpl42	54	52.439	Mola_mola
ENSAMXG00000035149	mrpl42	94	48.062	ENSMALG00000015794	mrpl42	75	48.062	Monopterus_albus
ENSAMXG00000035149	mrpl42	94	45.736	ENSNBRG00000003307	mrpl42	85	45.736	Neolamprologus_brichardi
ENSAMXG00000035149	mrpl42	94	46.512	ENSONIG00000011753	mrpl42	85	46.512	Oreochromis_niloticus
ENSAMXG00000035149	mrpl42	91	48.000	ENSOANG00000019984	-	84	48.000	Ornithorhynchus_anatinus
ENSAMXG00000035149	mrpl42	71	55.670	ENSORLG00000013500	mrpl42	56	55.670	Oryzias_latipes
ENSAMXG00000035149	mrpl42	71	55.670	ENSORLG00020000548	mrpl42	66	55.670	Oryzias_latipes_hni
ENSAMXG00000035149	mrpl42	71	56.701	ENSORLG00015016984	mrpl42	67	56.701	Oryzias_latipes_hsok
ENSAMXG00000035149	mrpl42	70	57.292	ENSOMEG00000010700	mrpl42	66	57.292	Oryzias_melastigma
ENSAMXG00000035149	mrpl42	100	47.101	ENSPKIG00000025457	mrpl42	95	47.101	Paramormyrops_kingsleyae
ENSAMXG00000035149	mrpl42	84	50.862	ENSPMGG00000019705	mrpl42	81	50.862	Periophthalmus_magnuspinnatus
ENSAMXG00000035149	mrpl42	82	46.087	ENSPMAG00000008091	mrpl42	74	46.087	Petromyzon_marinus
ENSAMXG00000035149	mrpl42	75	52.427	ENSPFOG00000016539	mrpl42	70	52.427	Poecilia_formosa
ENSAMXG00000035149	mrpl42	75	53.398	ENSPLAG00000001255	mrpl42	71	53.398	Poecilia_latipinna
ENSAMXG00000035149	mrpl42	100	45.255	ENSPMEG00000016462	mrpl42	81	45.255	Poecilia_mexicana
ENSAMXG00000035149	mrpl42	75	48.544	ENSPREG00000012053	mrpl42	75	48.544	Poecilia_reticulata
ENSAMXG00000035149	mrpl42	94	47.287	ENSPNYG00000009586	mrpl42	85	47.287	Pundamilia_nyererei
ENSAMXG00000035149	mrpl42	100	60.690	ENSPNAG00000020753	mrpl42	100	60.690	Pygocentrus_nattereri
ENSAMXG00000035149	mrpl42	81	52.459	ENSSMAG00000000262	mrpl42	84	52.459	Scophthalmus_maximus
ENSAMXG00000035149	mrpl42	80	50.413	ENSSDUG00000005949	mrpl42	83	50.413	Seriola_dumerili
ENSAMXG00000035149	mrpl42	80	50.413	ENSSLDG00000010159	mrpl42	83	50.413	Seriola_lalandi_dorsalis
ENSAMXG00000035149	mrpl42	80	52.294	ENSTRUG00000025949	mrpl42	74	52.294	Takifugu_rubripes
ENSAMXG00000035149	mrpl42	80	52.294	ENSXETG00000032902	mrpl42	88	52.294	Xenopus_tropicalis
ENSAMXG00000035149	mrpl42	82	47.619	ENSXCOG00000013875	mrpl42	95	47.619	Xiphophorus_couchianus