EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSAMXG00000035201 (Gene tree)
Gene ID
103030303
Gene Symbol
rpf2
Alias
bxdc1|ik:tdsubc_1a3|wu:fe17d08|wu:fj16d06|xx:tdsubc_1a3|zgc:77150
Full Name
ribosome production factor 2 homolog
Gene Type
protein_coding
Species
Astyanax_mexicanus
Status
putative
Strand
Minus strand
Length
11393 bases
Position
chr3:38866407-38877799
Accession
103030303
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSAMXP00000052932BrixPF04427.182.4e-4511
ENSAMXP00000029098BrixPF04427.182.5e-3511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSAMXT00000037435-2416XM_022685168ENSAMXP00000052932308 (aa)XP_022540889UPI000BBDE3DF
ENSAMXT00000055323-906-ENSAMXP00000029098301 (aa)--
Gene Model
Click here to download ENSAMXG00000035201's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035201's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSAMXG00000035201rpf29673.559ENSG00000197498RPF29674.272Homo_sapiens
ENSAMXG00000035201rpf29980.065ENSAPOG00000005714rpf29980.065Acanthochromis_polyacanthus
ENSAMXG00000035201rpf29971.803ENSAMEG00000015753RPF29971.803Ailuropoda_melanoleuca
ENSAMXG00000035201rpf25578.916ENSACIG00000006659rpf29978.916Amphilophus_citrinellus
ENSAMXG00000035201rpf29979.739ENSAOCG00000005173rpf29979.739Amphiprion_ocellaris
ENSAMXG00000035201rpf29979.739ENSAPEG00000004003rpf29979.739Amphiprion_percula
ENSAMXG00000035201rpf29980.782ENSATEG00000012818rpf29980.782Anabas_testudineus
ENSAMXG00000035201rpf28974.725ENSAPLG00000008812RPF210074.725Anas_platyrhynchos
ENSAMXG00000035201rpf29377.003ENSACAG00000011270RPF29377.003Anolis_carolinensis
ENSAMXG00000035201rpf29965.574ENSANAG00000034834-9965.574Aotus_nancymaae
ENSAMXG00000035201rpf29359.441ENSANAG00000025459-9257.343Aotus_nancymaae
ENSAMXG00000035201rpf29970.164ENSANAG00000026549-9970.164Aotus_nancymaae
ENSAMXG00000035201rpf29852.980ENSANAG00000021067-9852.318Aotus_nancymaae
ENSAMXG00000035201rpf28960.073ENSANAG00000033736-9160.806Aotus_nancymaae
ENSAMXG00000035201rpf29375.261ENSBTAG00000016584RPF29972.459Bos_taurus
ENSAMXG00000035201rpf29144.484WBGene00021830Y54E10A.109544.484Caenorhabditis_elegans
ENSAMXG00000035201rpf29972.787ENSCJAG00000038330RPF29972.787Callithrix_jacchus
ENSAMXG00000035201rpf29971.475ENSCAFG00000003918RPF29971.475Canis_familiaris
ENSAMXG00000035201rpf29967.219ENSCHIG00000022499RPF29968.852Capra_hircus
ENSAMXG00000035201rpf29673.559ENSTSYG00000013924RPF29673.559Carlito_syrichta
ENSAMXG00000035201rpf29758.419ENSCAPG00000014257RPF29757.732Cavia_aperea
ENSAMXG00000035201rpf29972.131ENSCPOG00000006797RPF29972.131Cavia_porcellus
ENSAMXG00000035201rpf29654.730ENSCCAG00000028553-9553.716Cebus_capucinus
ENSAMXG00000035201rpf29970.492ENSCCAG00000030365-9970.492Cebus_capucinus
ENSAMXG00000035201rpf29972.459ENSCCAG00000030864-9972.459Cebus_capucinus
ENSAMXG00000035201rpf28563.118ENSCCAG00000028906-9663.596Cebus_capucinus
ENSAMXG00000035201rpf28761.255ENSCATG00000029725-9874.419Cercocebus_atys
ENSAMXG00000035201rpf29657.627ENSCATG00000034352-9657.627Cercocebus_atys
ENSAMXG00000035201rpf29657.616ENSCLAG00000010874-9956.291Chinchilla_lanigera
ENSAMXG00000035201rpf29971.475ENSCLAG00000010393-9971.475Chinchilla_lanigera
ENSAMXG00000035201rpf28550.763ENSCLAG00000013252-9650.763Chinchilla_lanigera
ENSAMXG00000035201rpf29967.213ENSCHOG00000005865RPF29967.213Choloepus_hoffmanni
ENSAMXG00000035201rpf29973.529ENSCPBG00000006504RPF29973.529Chrysemys_picta_bellii
ENSAMXG00000035201rpf29258.451ENSCING00000008090-9258.451Ciona_intestinalis
ENSAMXG00000035201rpf29158.007ENSCSAVG00000010672-9558.007Ciona_savignyi
ENSAMXG00000035201rpf29673.898ENSCANG00000030665RPF29673.898Colobus_angolensis_palliatus
ENSAMXG00000035201rpf29972.131ENSCGRG00001007331-9972.131Cricetulus_griseus_chok1gshd
ENSAMXG00000035201rpf29957.049ENSCGRG00001005262-9857.049Cricetulus_griseus_chok1gshd
ENSAMXG00000035201rpf29672.727ENSCGRG00000006083Rpf29672.727Cricetulus_griseus_crigri
ENSAMXG00000035201rpf29578.157ENSCSEG00000015725rpf29778.157Cynoglossus_semilaevis
ENSAMXG00000035201rpf29979.479ENSCVAG00000001072rpf29979.479Cyprinodon_variegatus
ENSAMXG00000035201rpf29876.159ENSDARG00000043960rpf29876.159Danio_rerio
ENSAMXG00000035201rpf26770.388ENSDNOG00000039270RPF29870.388Dasypus_novemcinctus
ENSAMXG00000035201rpf26076.344ENSDORG00000026915Rpf210076.344Dipodomys_ordii
ENSAMXG00000035201rpf29150.178FBgn0038585Non38850.178Drosophila_melanogaster
ENSAMXG00000035201rpf29356.491ENSEBUG00000003640rpf28656.491Eptatretus_burgeri
ENSAMXG00000035201rpf25063.758ENSEASG00005002363-9663.758Equus_asinus_asinus
ENSAMXG00000035201rpf29670.847ENSEASG00005006927-9969.868Equus_asinus_asinus
ENSAMXG00000035201rpf29673.898ENSECAG00000017121RPF29972.848Equus_caballus
ENSAMXG00000035201rpf29657.912ENSEEUG00000006169RPF29957.912Erinaceus_europaeus
ENSAMXG00000035201rpf29582.192ENSELUG00000018518rpf29682.192Esox_lucius
ENSAMXG00000035201rpf29971.803ENSFCAG00000001527RPF29971.803Felis_catus
ENSAMXG00000035201rpf29974.837ENSFALG00000010816RPF29974.837Ficedula_albicollis
ENSAMXG00000035201rpf29972.131ENSFDAG00000005811-9972.131Fukomys_damarensis
ENSAMXG00000035201rpf28861.111ENSFDAG00000016721-10061.217Fukomys_damarensis
ENSAMXG00000035201rpf29978.827ENSFHEG00000011243rpf29978.827Fundulus_heteroclitus
ENSAMXG00000035201rpf29768.896ENSGMOG00000002521rpf210068.896Gadus_morhua
ENSAMXG00000035201rpf29974.183ENSGALG00000037087RPF29974.183Gallus_gallus
ENSAMXG00000035201rpf29681.695ENSGAFG00000009537rpf29781.695Gambusia_affinis
ENSAMXG00000035201rpf29975.896ENSGACG00000006507rpf29975.896Gasterosteus_aculeatus
ENSAMXG00000035201rpf29970.588ENSGAGG00000016221RPF29970.588Gopherus_agassizii
ENSAMXG00000035201rpf29660.000ENSGGOG00000001469RPF29659.661Gorilla_gorilla
ENSAMXG00000035201rpf29268.905ENSGGOG00000024187-9968.905Gorilla_gorilla
ENSAMXG00000035201rpf29980.456ENSHBUG00000021805rpf29980.456Haplochromis_burtoni
ENSAMXG00000035201rpf29672.203ENSHGLG00000001322RPF29971.148Heterocephalus_glaber_female
ENSAMXG00000035201rpf29267.376ENSHGLG00000012697-9867.376Heterocephalus_glaber_female
ENSAMXG00000035201rpf29367.247ENSHGLG00000012500-7667.944Heterocephalus_glaber_female
ENSAMXG00000035201rpf29366.899ENSHGLG00100012473-9267.596Heterocephalus_glaber_male
ENSAMXG00000035201rpf29361.290ENSHGLG00100002981-10061.290Heterocephalus_glaber_male
ENSAMXG00000035201rpf29267.376ENSHGLG00100000462-9867.376Heterocephalus_glaber_male
ENSAMXG00000035201rpf29672.203ENSHGLG00100012131RPF29971.148Heterocephalus_glaber_male
ENSAMXG00000035201rpf28558.779ENSHGLG00100009310-9659.924Heterocephalus_glaber_male
ENSAMXG00000035201rpf29582.192ENSHCOG00000000225rpf29682.192Hippocampus_comes
ENSAMXG00000035201rpf210072.727ENSIPUG00000016288rpf210072.403Ictalurus_punctatus
ENSAMXG00000035201rpf29656.610ENSSTOG00000013114RPF210054.152Ictidomys_tridecemlineatus
ENSAMXG00000035201rpf29269.565ENSJJAG00000009092Rpf210075.000Jaculus_jaculus
ENSAMXG00000035201rpf29978.827ENSKMAG00000014609rpf210078.571Kryptolebias_marmoratus
ENSAMXG00000035201rpf29978.431ENSLBEG00000011907rpf29972.575Labrus_bergylta
ENSAMXG00000035201rpf29973.139ENSLACG00000003942RPF210073.139Latimeria_chalumnae
ENSAMXG00000035201rpf29978.317ENSLOCG00000016992rpf29978.317Lepisosteus_oculatus
ENSAMXG00000035201rpf29972.787ENSLAFG00000018219RPF29972.787Loxodonta_africana
ENSAMXG00000035201rpf28759.559ENSMFAG00000036119-9959.559Macaca_fascicularis
ENSAMXG00000035201rpf29673.898ENSMFAG00000000417RPF29673.898Macaca_fascicularis
ENSAMXG00000035201rpf29658.333ENSMMUG00000042376-9758.333Macaca_mulatta
ENSAMXG00000035201rpf29673.898ENSMMUG00000021532RPF29674.757Macaca_mulatta
ENSAMXG00000035201rpf29660.678ENSMNEG00000031683RPF29660.339Macaca_nemestrina
ENSAMXG00000035201rpf29660.339ENSMLEG00000042472-9760.339Mandrillus_leucophaeus
ENSAMXG00000035201rpf29979.479ENSMAMG00000004267rpf29979.479Mastacembelus_armatus
ENSAMXG00000035201rpf29980.456ENSMZEG00005015632rpf29980.456Maylandia_zebra
ENSAMXG00000035201rpf29974.183ENSMGAG00000013429RPF29974.183Meleagris_gallopavo
ENSAMXG00000035201rpf26073.438ENSMAUG00000005049Rpf210073.438Mesocricetus_auratus
ENSAMXG00000035201rpf29674.237ENSMICG00000032086-9674.237Microcebus_murinus
ENSAMXG00000035201rpf29665.424ENSMICG00000038169-9665.424Microcebus_murinus
ENSAMXG00000035201rpf29663.851ENSMICG00000028979-9763.851Microcebus_murinus
ENSAMXG00000035201rpf29871.096ENSMOCG00000005634Rpf210068.478Microtus_ochrogaster
ENSAMXG00000035201rpf29771.237ENSMMOG00000014844rpf29971.237Mola_mola
ENSAMXG00000035201rpf29672.054ENSMODG00000017919RPF29772.054Monodelphis_domestica
ENSAMXG00000035201rpf29680.339ENSMALG00000019046rpf29680.339Monopterus_albus
ENSAMXG00000035201rpf29972.131MGP_CAROLIEiJ_G0015254Rpf210072.727Mus_caroli
ENSAMXG00000035201rpf29971.803ENSMUSG00000038510Rpf210072.727Mus_musculus
ENSAMXG00000035201rpf29972.131MGP_PahariEiJ_G0030671Rpf210073.737Mus_pahari
ENSAMXG00000035201rpf29972.131MGP_SPRETEiJ_G0016063Rpf210073.737Mus_spretus
ENSAMXG00000035201rpf29972.131ENSMPUG00000010183RPF28672.131Mustela_putorius_furo
ENSAMXG00000035201rpf27975.309ENSMLUG00000005676RPF29973.913Myotis_lucifugus
ENSAMXG00000035201rpf29971.803ENSNGAG00000009701Rpf29971.803Nannospalax_galili
ENSAMXG00000035201rpf29980.782ENSNBRG00000011087rpf29980.782Neolamprologus_brichardi
ENSAMXG00000035201rpf29673.220ENSNLEG00000027819RPF29972.131Nomascus_leucogenys
ENSAMXG00000035201rpf27771.186ENSNLEG00000011848-9471.491Nomascus_leucogenys
ENSAMXG00000035201rpf28470.385ENSNLEG00000033597-8570.385Nomascus_leucogenys
ENSAMXG00000035201rpf29255.986ENSMEUG00000006421RPF29655.986Notamacropus_eugenii
ENSAMXG00000035201rpf28961.455ENSODEG00000002442-9461.455Octodon_degus
ENSAMXG00000035201rpf29962.295ENSODEG00000006584-9962.295Octodon_degus
ENSAMXG00000035201rpf28662.121ENSODEG00000006939-9662.121Octodon_degus
ENSAMXG00000035201rpf29175.269ENSODEG00000013529-10069.203Octodon_degus
ENSAMXG00000035201rpf29370.383ENSODEG00000019144-9967.541Octodon_degus
ENSAMXG00000035201rpf28960.364ENSODEG00000003531-10060.364Octodon_degus
ENSAMXG00000035201rpf29981.107ENSONIG00000011383rpf29981.107Oreochromis_niloticus
ENSAMXG00000035201rpf29972.459ENSOCUG00000016028RPF29972.459Oryctolagus_cuniculus
ENSAMXG00000035201rpf29977.199ENSORLG00000015183rpf29977.199Oryzias_latipes
ENSAMXG00000035201rpf29976.873ENSORLG00020008756rpf29673.579Oryzias_latipes_hni
ENSAMXG00000035201rpf29977.199ENSORLG00015003841RPF29977.199Oryzias_latipes_hsok
ENSAMXG00000035201rpf29979.479ENSOMEG00000011508rpf29979.479Oryzias_melastigma
ENSAMXG00000035201rpf29672.542ENSOGAG00000007438RPF29672.542Otolemur_garnettii
ENSAMXG00000035201rpf29375.261ENSOARG00000015548-9972.459Ovis_aries
ENSAMXG00000035201rpf29375.261ENSOARG00000009886-9972.459Ovis_aries
ENSAMXG00000035201rpf29068.841ENSPPAG00000032089-9968.841Pan_paniscus
ENSAMXG00000035201rpf29673.559ENSPPAG00000035622RPF29673.559Pan_paniscus
ENSAMXG00000035201rpf29972.131ENSPPRG00000000320-9972.131Panthera_pardus
ENSAMXG00000035201rpf28963.504ENSPPRG00000008363-9063.504Panthera_pardus
ENSAMXG00000035201rpf29972.131ENSPTIG00000002060RPF29972.131Panthera_tigris_altaica
ENSAMXG00000035201rpf29673.559ENSPTRG00000018503RPF29673.559Pan_troglodytes
ENSAMXG00000035201rpf29673.898ENSPANG00000018834RPF29673.898Papio_anubis
ENSAMXG00000035201rpf29979.153ENSPKIG00000019506rpf210079.153Paramormyrops_kingsleyae
ENSAMXG00000035201rpf29972.222ENSPSIG00000014887RPF29972.222Pelodiscus_sinensis
ENSAMXG00000035201rpf29268.841ENSPEMG00000011413Rpf210068.841Peromyscus_maniculatus_bairdii
ENSAMXG00000035201rpf29372.822ENSPCIG00000028172RPF29870.492Phascolarctos_cinereus
ENSAMXG00000035201rpf29682.034ENSPFOG00000003396rpf29782.034Poecilia_formosa
ENSAMXG00000035201rpf29681.356ENSPLAG00000001226rpf29781.356Poecilia_latipinna
ENSAMXG00000035201rpf29682.034ENSPMEG00000007781rpf29782.034Poecilia_mexicana
ENSAMXG00000035201rpf29681.017ENSPREG00000020525rpf29781.017Poecilia_reticulata
ENSAMXG00000035201rpf29673.898ENSPPYG00000016925RPF29673.898Pongo_abelii
ENSAMXG00000035201rpf26375.385ENSPCAG00000002562RPF27675.936Procavia_capensis
ENSAMXG00000035201rpf29362.718ENSPCOG00000012785RPF29363.194Propithecus_coquereli
ENSAMXG00000035201rpf27974.897ENSPVAG00000003446RPF28372.941Pteropus_vampyrus
ENSAMXG00000035201rpf29887.086ENSPNAG00000000082rpf29887.086Pygocentrus_nattereri
ENSAMXG00000035201rpf29972.131ENSRNOG00000000587Rpf29972.131Rattus_norvegicus
ENSAMXG00000035201rpf29671.525ENSRBIG00000038389RPF29671.525Rhinopithecus_bieti
ENSAMXG00000035201rpf28170.683ENSRROG00000036685-9171.548Rhinopithecus_roxellana
ENSAMXG00000035201rpf29673.220ENSRROG00000036457RPF29773.220Rhinopithecus_roxellana
ENSAMXG00000035201rpf28759.851ENSRROG00000028992-9059.480Rhinopithecus_roxellana
ENSAMXG00000035201rpf28666.667ENSRROG00000039510-9966.667Rhinopithecus_roxellana
ENSAMXG00000035201rpf29441.254YKR081C-8841.254Saccharomyces_cerevisiae
ENSAMXG00000035201rpf29260.284ENSSBOG00000025434-9658.156Saimiri_boliviensis_boliviensis
ENSAMXG00000035201rpf28156.225ENSSBOG00000030264-8556.838Saimiri_boliviensis_boliviensis
ENSAMXG00000035201rpf28266.403ENSSBOG00000022486-8766.403Saimiri_boliviensis_boliviensis
ENSAMXG00000035201rpf28954.212ENSSBOG00000034420-9152.015Saimiri_boliviensis_boliviensis
ENSAMXG00000035201rpf27957.787ENSSBOG00000029182-9157.741Saimiri_boliviensis_boliviensis
ENSAMXG00000035201rpf29870.530ENSSHAG00000002212RPF29870.530Sarcophilus_harrisii
ENSAMXG00000035201rpf29581.507ENSSFOG00015020916rpf29581.507Scleropages_formosus
ENSAMXG00000035201rpf29980.130ENSSMAG00000017499rpf29980.130Scophthalmus_maximus
ENSAMXG00000035201rpf29974.760ENSSDUG00000010383rpf29974.760Seriola_dumerili
ENSAMXG00000035201rpf29979.545ENSSLDG00000022111rpf210079.545Seriola_lalandi_dorsalis
ENSAMXG00000035201rpf29952.787ENSSARG00000012063RPF29952.787Sorex_araneus
ENSAMXG00000035201rpf29970.684ENSSPUG00000005108RPF29970.684Sphenodon_punctatus
ENSAMXG00000035201rpf29980.130ENSSPAG00000008035rpf29980.130Stegastes_partitus
ENSAMXG00000035201rpf29673.220ENSSSCG00000004394RPF29673.220Sus_scrofa
ENSAMXG00000035201rpf29973.203ENSTGUG00000012034RPF29973.203Taeniopygia_guttata
ENSAMXG00000035201rpf29974.510ENSTRUG00000018264rpf29974.510Takifugu_rubripes
ENSAMXG00000035201rpf29669.360ENSTNIG00000002749rpf29769.360Tetraodon_nigroviridis
ENSAMXG00000035201rpf27969.136ENSTBEG00000017151RPF27969.136Tupaia_belangeri
ENSAMXG00000035201rpf29375.958ENSTTRG00000012357RPF29973.115Tursiops_truncatus
ENSAMXG00000035201rpf29972.787ENSUAMG00000013497RPF29972.787Ursus_americanus
ENSAMXG00000035201rpf29972.459ENSUMAG00000025488RPF29972.459Ursus_maritimus
ENSAMXG00000035201rpf29673.220ENSVPAG00000009562RPF29773.220Vicugna_pacos
ENSAMXG00000035201rpf29965.436ENSVVUG00000006593-9965.436Vulpes_vulpes
ENSAMXG00000035201rpf28864.906ENSVVUG00000021231-9964.000Vulpes_vulpes
ENSAMXG00000035201rpf29972.549ENSXETG00000021335rpf29972.549Xenopus_tropicalis
ENSAMXG00000035201rpf29677.627ENSXCOG00000001590rpf29777.627Xiphophorus_couchianus
ENSAMXG00000035201rpf29674.653ENSXMAG00000021706rpf29674.653Xiphophorus_maculatus

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