EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035337 (Gene tree)
Gene ID: -
Gene Symbol: zmat4a
Alias: FLJ13842
Full Name: zinc finger%2C matrin-type 4a
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 215522 bases
Position: chrAPWO02000081.1:1209307-1424828
Accession: ZDB-GENE-081104-333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000032544	zf-met	PF12874.7	2.4e-31	1	4
ENSAMXP00000032544	zf-met	PF12874.7	2.4e-31	2	4
ENSAMXP00000032544	zf-met	PF12874.7	2.4e-31	3	4
ENSAMXP00000032544	zf-met	PF12874.7	2.4e-31	4	4
ENSAMXP00000038889	zf-met	PF12874.7	1.9e-17	1	2
ENSAMXP00000038889	zf-met	PF12874.7	1.9e-17	2	2
ENSAMXP00000051385	zf-met	PF12874.7	2.6e-17	1	2
ENSAMXP00000051385	zf-met	PF12874.7	2.6e-17	2	2
ENSAMXP00000032544	zf-C2H2_jaz	PF12171.8	1.6e-23	1	1
ENSAMXP00000038889	zf-C2H2_jaz	PF12171.8	2.5e-13	1	1
ENSAMXP00000051385	zf-C2H2_jaz	PF12171.8	3.3e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000053572	-	903	-	ENSAMXP00000051385	258 (aa)	-	-
ENSAMXT00000050516	-	702	-	ENSAMXP00000038889	233 (aa)	-	-
ENSAMXT00000042586	-	663	-	ENSAMXP00000032544	220 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000035337's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035337's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035337	zmat4a	95	49.302	ENSAMXG00000031057	znf346	75	49.074
ENSAMXG00000035337	zmat4a	100	68.326	ENSAMXG00000002299	zgc:171482	100	68.326

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035337	zmat4a	99	74.439	ENSG00000165061	ZMAT4	99	71.362	Homo_sapiens
ENSAMXG00000035337	zmat4a	89	73.469	ENSAPOG00000007448	zmat4a	98	72.589	Acanthochromis_polyacanthus
ENSAMXG00000035337	zmat4a	99	73.094	ENSAMEG00000002758	ZMAT4	99	70.852	Ailuropoda_melanoleuca
ENSAMXG00000035337	zmat4a	100	88.636	ENSACIG00000009080	zmat4a	100	87.727	Amphilophus_citrinellus
ENSAMXG00000035337	zmat4a	99	90.991	ENSAOCG00000004416	zmat4a	85	90.991	Amphiprion_ocellaris
ENSAMXG00000035337	zmat4a	99	90.541	ENSAPEG00000018565	zmat4a	85	90.541	Amphiprion_percula
ENSAMXG00000035337	zmat4a	100	89.640	ENSATEG00000012630	zmat4a	80	97.345	Anabas_testudineus
ENSAMXG00000035337	zmat4a	100	77.333	ENSAPLG00000006106	ZMAT4	98	74.222	Anas_platyrhynchos
ENSAMXG00000035337	zmat4a	99	77.202	ENSACAG00000005388	ZMAT4	92	74.093	Anolis_carolinensis
ENSAMXG00000035337	zmat4a	99	74.439	ENSANAG00000027926	ZMAT4	97	72.124	Aotus_nancymaae
ENSAMXG00000035337	zmat4a	99	89.189	ENSACLG00000005038	zmat4a	85	89.189	Astatotilapia_calliptera
ENSAMXG00000035337	zmat4a	99	73.543	ENSBTAG00000017420	ZMAT4	97	70.852	Bos_taurus
ENSAMXG00000035337	zmat4a	99	72.646	ENSCAFG00000005744	ZMAT4	97	70.404	Canis_familiaris
ENSAMXG00000035337	zmat4a	73	66.265	ENSCAFG00020002716	ZMAT4	97	63.253	Canis_lupus_dingo
ENSAMXG00000035337	zmat4a	100	73.333	ENSCHIG00000022017	ZMAT4	99	70.852	Capra_hircus
ENSAMXG00000035337	zmat4a	70	69.811	ENSTSYG00000031413	ZMAT4	96	66.038	Carlito_syrichta
ENSAMXG00000035337	zmat4a	99	73.214	ENSCAPG00000014401	ZMAT4	98	70.536	Cavia_aperea
ENSAMXG00000035337	zmat4a	99	73.214	ENSCPOG00000015224	ZMAT4	98	70.536	Cavia_porcellus
ENSAMXG00000035337	zmat4a	99	74.439	ENSCCAG00000027437	ZMAT4	97	72.124	Cebus_capucinus
ENSAMXG00000035337	zmat4a	100	74.222	ENSCATG00000044978	ZMAT4	97	72.124	Cercocebus_atys
ENSAMXG00000035337	zmat4a	99	73.661	ENSCLAG00000000923	ZMAT4	98	70.982	Chinchilla_lanigera
ENSAMXG00000035337	zmat4a	99	74.107	ENSCSAG00000015108	ZMAT4	100	71.806	Chlorocebus_sabaeus
ENSAMXG00000035337	zmat4a	99	62.162	ENSCHOG00000003755	ZMAT4	97	60.360	Choloepus_hoffmanni
ENSAMXG00000035337	zmat4a	92	77.519	ENSCPBG00000002781	ZMAT4	72	84.956	Chrysemys_picta_bellii
ENSAMXG00000035337	zmat4a	84	72.487	ENSCANG00000032136	ZMAT4	97	69.792	Colobus_angolensis_palliatus
ENSAMXG00000035337	zmat4a	99	73.214	ENSCGRG00001016583	Zmat4	98	70.982	Cricetulus_griseus_chok1gshd
ENSAMXG00000035337	zmat4a	99	73.214	ENSCGRG00000002696	Zmat4	98	70.982	Cricetulus_griseus_crigri
ENSAMXG00000035337	zmat4a	99	90.991	ENSCSEG00000013707	zmat4a	94	90.991	Cynoglossus_semilaevis
ENSAMXG00000035337	zmat4a	99	88.739	ENSCVAG00000000113	zmat4a	85	88.739	Cyprinodon_variegatus
ENSAMXG00000035337	zmat4a	100	92.411	ENSDARG00000092987	zmat4a	100	89.286	Danio_rerio
ENSAMXG00000035337	zmat4a	100	80.000	ENSDARG00000061419	zmat4b	100	80.000	Danio_rerio
ENSAMXG00000035337	zmat4a	99	73.214	ENSDNOG00000001045	ZMAT4	100	71.429	Dasypus_novemcinctus
ENSAMXG00000035337	zmat4a	99	73.991	ENSDORG00000009300	Zmat4	97	71.300	Dipodomys_ordii
ENSAMXG00000035337	zmat4a	70	72.152	ENSETEG00000010474	ZMAT4	81	68.354	Echinops_telfairi
ENSAMXG00000035337	zmat4a	99	73.543	ENSEASG00005010447	ZMAT4	97	70.852	Equus_asinus_asinus
ENSAMXG00000035337	zmat4a	99	73.543	ENSECAG00000021550	ZMAT4	97	70.852	Equus_caballus
ENSAMXG00000035337	zmat4a	99	62.054	ENSEEUG00000002565	ZMAT4	100	59.821	Erinaceus_europaeus
ENSAMXG00000035337	zmat4a	99	90.868	ENSELUG00000005097	zmat4a	100	87.946	Esox_lucius
ENSAMXG00000035337	zmat4a	100	73.333	ENSFCAG00000012775	ZMAT4	100	71.111	Felis_catus
ENSAMXG00000035337	zmat4a	99	76.712	ENSFALG00000006455	ZMAT4	97	72.103	Ficedula_albicollis
ENSAMXG00000035337	zmat4a	99	69.643	ENSFDAG00000015258	ZMAT4	95	69.643	Fukomys_damarensis
ENSAMXG00000035337	zmat4a	100	87.727	ENSFHEG00000022872	zmat4b	100	86.099	Fundulus_heteroclitus
ENSAMXG00000035337	zmat4a	99	89.189	ENSGMOG00000007950	zmat4a	100	89.189	Gadus_morhua
ENSAMXG00000035337	zmat4a	99	77.027	ENSGALG00000003470	ZMAT4	97	70.886	Gallus_gallus
ENSAMXG00000035337	zmat4a	100	87.727	ENSGAFG00000013149	zmat4a	99	85.909	Gambusia_affinis
ENSAMXG00000035337	zmat4a	99	90.090	ENSGACG00000005515	zmat4a	98	90.090	Gasterosteus_aculeatus
ENSAMXG00000035337	zmat4a	99	78.924	ENSGAGG00000004799	ZMAT4	97	75.785	Gopherus_agassizii
ENSAMXG00000035337	zmat4a	99	74.439	ENSGGOG00000006633	ZMAT4	97	72.124	Gorilla_gorilla
ENSAMXG00000035337	zmat4a	99	89.640	ENSHBUG00000012634	zmat4a	85	89.640	Haplochromis_burtoni
ENSAMXG00000035337	zmat4a	99	72.321	ENSHGLG00000003246	ZMAT4	98	70.089	Heterocephalus_glaber_female
ENSAMXG00000035337	zmat4a	70	70.253	ENSHGLG00100000081	ZMAT4	100	67.089	Heterocephalus_glaber_male
ENSAMXG00000035337	zmat4a	75	95.614	ENSHCOG00000006516	zmat4b	91	95.614	Hippocampus_comes
ENSAMXG00000035337	zmat4a	99	90.541	ENSIPUG00000022248	zmat4	100	85.088	Ictalurus_punctatus
ENSAMXG00000035337	zmat4a	99	72.197	ENSJJAG00000013484	Zmat4	97	70.404	Jaculus_jaculus
ENSAMXG00000035337	zmat4a	99	74.439	ENSLACG00000006206	-	97	72.197	Latimeria_chalumnae
ENSAMXG00000035337	zmat4a	61	57.143	ENSLACG00000005109	-	92	57.143	Latimeria_chalumnae
ENSAMXG00000035337	zmat4a	100	90.135	ENSLOCG00000015435	zmat4b	98	90.135	Lepisosteus_oculatus
ENSAMXG00000035337	zmat4a	99	73.333	ENSLAFG00000014753	ZMAT4	100	70.667	Loxodonta_africana
ENSAMXG00000035337	zmat4a	99	74.439	ENSMFAG00000043475	ZMAT4	97	72.124	Macaca_fascicularis
ENSAMXG00000035337	zmat4a	92	68.599	ENSMMUG00000000776	ZMAT4	97	69.792	Macaca_mulatta
ENSAMXG00000035337	zmat4a	99	74.439	ENSMNEG00000042102	ZMAT4	97	72.124	Macaca_nemestrina
ENSAMXG00000035337	zmat4a	99	74.439	ENSMLEG00000034448	ZMAT4	97	72.124	Mandrillus_leucophaeus
ENSAMXG00000035337	zmat4a	99	89.140	ENSMAMG00000019914	zmat4a	75	95.575	Mastacembelus_armatus
ENSAMXG00000035337	zmat4a	99	89.640	ENSMZEG00005004946	zmat4a	85	89.640	Maylandia_zebra
ENSAMXG00000035337	zmat4a	99	74.888	ENSMGAG00000002288	ZMAT4	97	73.009	Meleagris_gallopavo
ENSAMXG00000035337	zmat4a	84	70.899	ENSMICG00000047837	ZMAT4	97	67.725	Microcebus_murinus
ENSAMXG00000035337	zmat4a	99	73.543	ENSMOCG00000015996	Zmat4	97	70.852	Microtus_ochrogaster
ENSAMXG00000035337	zmat4a	99	90.950	ENSMMOG00000012619	zmat4a	85	96.522	Mola_mola
ENSAMXG00000035337	zmat4a	85	75.385	ENSMODG00000010499	ZMAT4	98	74.872	Monodelphis_domestica
ENSAMXG00000035337	zmat4a	99	88.288	ENSMALG00000015056	zmat4a	85	88.288	Monopterus_albus
ENSAMXG00000035337	zmat4a	100	73.333	MGP_CAROLIEiJ_G0030909	Zmat4	100	84.375	Mus_caroli
ENSAMXG00000035337	zmat4a	100	73.333	ENSMUSG00000037492	Zmat4	100	84.375	Mus_musculus
ENSAMXG00000035337	zmat4a	100	73.333	MGP_PahariEiJ_G0021380	Zmat4	100	84.375	Mus_pahari
ENSAMXG00000035337	zmat4a	100	73.333	MGP_SPRETEiJ_G0032028	Zmat4	100	84.375	Mus_spretus
ENSAMXG00000035337	zmat4a	100	72.889	ENSMPUG00000005832	ZMAT4	80	70.667	Mustela_putorius_furo
ENSAMXG00000035337	zmat4a	58	69.173	ENSMLUG00000014209	ZMAT4	100	63.910	Myotis_lucifugus
ENSAMXG00000035337	zmat4a	99	72.646	ENSNGAG00000015545	Zmat4	97	69.955	Nannospalax_galili
ENSAMXG00000035337	zmat4a	100	88.341	ENSNBRG00000011844	zmat4a	100	88.288	Neolamprologus_brichardi
ENSAMXG00000035337	zmat4a	99	74.439	ENSNLEG00000012564	ZMAT4	97	72.124	Nomascus_leucogenys
ENSAMXG00000035337	zmat4a	99	76.106	ENSMEUG00000000558	ZMAT4	100	72.368	Notamacropus_eugenii
ENSAMXG00000035337	zmat4a	99	73.991	ENSOPRG00000009257	ZMAT4	97	71.300	Ochotona_princeps
ENSAMXG00000035337	zmat4a	99	73.214	ENSODEG00000006439	ZMAT4	98	70.982	Octodon_degus
ENSAMXG00000035337	zmat4a	79	83.240	ENSONIG00000016086	zmat4a	96	83.240	Oreochromis_niloticus
ENSAMXG00000035337	zmat4a	96	36.694	ENSONIG00000020374	-	51	36.694	Oreochromis_niloticus
ENSAMXG00000035337	zmat4a	97	84.071	ENSOANG00000022431	ZMAT4	100	84.071	Ornithorhynchus_anatinus
ENSAMXG00000035337	zmat4a	99	73.991	ENSOCUG00000000977	ZMAT4	97	71.300	Oryctolagus_cuniculus
ENSAMXG00000035337	zmat4a	75	95.652	ENSORLG00000016169	zmat4b	79	95.652	Oryzias_latipes
ENSAMXG00000035337	zmat4a	99	88.889	ENSORLG00020019602	zmat4a	96	88.889	Oryzias_latipes_hni
ENSAMXG00000035337	zmat4a	99	88.889	ENSORLG00015009006	zmat4a	96	88.889	Oryzias_latipes_hsok
ENSAMXG00000035337	zmat4a	100	88.053	ENSOMEG00000003441	zmat4a	77	89.381	Oryzias_melastigma
ENSAMXG00000035337	zmat4a	99	72.768	ENSOGAG00000012558	ZMAT4	100	70.089	Otolemur_garnettii
ENSAMXG00000035337	zmat4a	100	73.333	ENSOARG00000002354	ZMAT4	85	70.667	Ovis_aries
ENSAMXG00000035337	zmat4a	100	74.222	ENSPPAG00000042573	ZMAT4	100	71.930	Pan_paniscus
ENSAMXG00000035337	zmat4a	99	73.094	ENSPPRG00000007023	ZMAT4	97	70.852	Panthera_pardus
ENSAMXG00000035337	zmat4a	99	73.094	ENSPTIG00000019738	ZMAT4	97	70.852	Panthera_tigris_altaica
ENSAMXG00000035337	zmat4a	99	74.439	ENSPTRG00000020191	ZMAT4	97	72.124	Pan_troglodytes
ENSAMXG00000035337	zmat4a	99	74.439	ENSPANG00000014196	ZMAT4	97	72.124	Papio_anubis
ENSAMXG00000035337	zmat4a	100	62.424	ENSPKIG00000021792	zmat4b	100	62.424	Paramormyrops_kingsleyae
ENSAMXG00000035337	zmat4a	100	88.789	ENSPKIG00000000048	zmat4a	85	88.739	Paramormyrops_kingsleyae
ENSAMXG00000035337	zmat4a	99	79.372	ENSPSIG00000004847	ZMAT4	97	76.682	Pelodiscus_sinensis
ENSAMXG00000035337	zmat4a	100	83.333	ENSPMGG00000001436	zmat4b	100	83.333	Periophthalmus_magnuspinnatus
ENSAMXG00000035337	zmat4a	98	53.846	ENSPMAG00000004582	zmat4a	96	54.054	Petromyzon_marinus
ENSAMXG00000035337	zmat4a	99	76.991	ENSPCIG00000028706	ZMAT4	90	76.106	Phascolarctos_cinereus
ENSAMXG00000035337	zmat4a	99	88.288	ENSPFOG00000006742	zmat4a	85	88.288	Poecilia_formosa
ENSAMXG00000035337	zmat4a	100	88.341	ENSPLAG00000019268	zmat4a	88	88.341	Poecilia_latipinna
ENSAMXG00000035337	zmat4a	99	88.288	ENSPMEG00000007870	zmat4a	96	88.288	Poecilia_mexicana
ENSAMXG00000035337	zmat4a	99	88.288	ENSPREG00000014914	zmat4a	85	88.288	Poecilia_reticulata
ENSAMXG00000035337	zmat4a	99	74.439	ENSPPYG00000018540	ZMAT4	97	72.124	Pongo_abelii
ENSAMXG00000035337	zmat4a	99	72.197	ENSPCAG00000004820	ZMAT4	97	69.507	Procavia_capensis
ENSAMXG00000035337	zmat4a	99	73.991	ENSPCOG00000007717	ZMAT4	97	71.300	Propithecus_coquereli
ENSAMXG00000035337	zmat4a	85	75.000	ENSPVAG00000011393	ZMAT4	84	71.354	Pteropus_vampyrus
ENSAMXG00000035337	zmat4a	99	89.593	ENSPNYG00000006173	zmat4a	79	89.593	Pundamilia_nyererei
ENSAMXG00000035337	zmat4a	99	95.946	ENSPNAG00000009604	zmat4a	85	95.946	Pygocentrus_nattereri
ENSAMXG00000035337	zmat4a	99	73.874	ENSPNAG00000023764	zmat4b	98	73.874	Pygocentrus_nattereri
ENSAMXG00000035337	zmat4a	99	71.875	ENSRNOG00000042690	Zmat4	97	70.089	Rattus_norvegicus
ENSAMXG00000035337	zmat4a	99	74.439	ENSRBIG00000031887	ZMAT4	97	72.124	Rhinopithecus_bieti
ENSAMXG00000035337	zmat4a	99	74.439	ENSRROG00000040877	ZMAT4	97	72.124	Rhinopithecus_roxellana
ENSAMXG00000035337	zmat4a	99	74.439	ENSSBOG00000017391	ZMAT4	97	72.124	Saimiri_boliviensis_boliviensis
ENSAMXG00000035337	zmat4a	78	68.500	ENSSHAG00000011847	ZMAT4	97	67.500	Sarcophilus_harrisii
ENSAMXG00000035337	zmat4a	99	89.640	ENSSFOG00015013158	zmat4	98	86.878	Scleropages_formosus
ENSAMXG00000035337	zmat4a	71	82.243	ENSSFOG00015015440	zmat4b	89	82.243	Scleropages_formosus
ENSAMXG00000035337	zmat4a	99	90.991	ENSSMAG00000017693	zmat4a	100	88.889	Scophthalmus_maximus
ENSAMXG00000035337	zmat4a	99	90.991	ENSSDUG00000005878	zmat4a	85	90.991	Seriola_dumerili
ENSAMXG00000035337	zmat4a	99	90.991	ENSSLDG00000012934	zmat4a	85	90.991	Seriola_lalandi_dorsalis
ENSAMXG00000035337	zmat4a	99	66.518	ENSSARG00000003679	ZMAT4	98	65.333	Sorex_araneus
ENSAMXG00000035337	zmat4a	100	90.991	ENSSPAG00000021408	zmat4a	83	90.991	Stegastes_partitus
ENSAMXG00000035337	zmat4a	99	73.991	ENSSSCG00000007010	ZMAT4	97	70.852	Sus_scrofa
ENSAMXG00000035337	zmat4a	99	76.889	ENSTGUG00000005159	ZMAT4	100	76.444	Taeniopygia_guttata
ENSAMXG00000035337	zmat4a	99	89.593	ENSTRUG00000005170	zmat4a	75	89.593	Takifugu_rubripes
ENSAMXG00000035337	zmat4a	100	74.890	ENSTNIG00000018863	zmat4b	100	74.890	Tetraodon_nigroviridis
ENSAMXG00000035337	zmat4a	99	61.883	ENSTBEG00000016172	ZMAT4	97	59.641	Tupaia_belangeri
ENSAMXG00000035337	zmat4a	99	69.058	ENSTTRG00000009606	ZMAT4	97	67.265	Tursiops_truncatus
ENSAMXG00000035337	zmat4a	100	72.889	ENSUMAG00000025578	ZMAT4	100	70.667	Ursus_maritimus
ENSAMXG00000035337	zmat4a	99	65.022	ENSVPAG00000009783	ZMAT4	97	61.883	Vicugna_pacos
ENSAMXG00000035337	zmat4a	100	72.889	ENSVVUG00000020407	ZMAT4	97	70.852	Vulpes_vulpes
ENSAMXG00000035337	zmat4a	99	41.228	ENSXCOG00000010189	-	99	40.171	Xiphophorus_couchianus
ENSAMXG00000035337	zmat4a	52	69.748	ENSXCOG00000015061	zmat4b	84	69.748	Xiphophorus_couchianus
ENSAMXG00000035337	zmat4a	99	87.838	ENSXMAG00000010461	zmat4a	85	87.838	Xiphophorus_maculatus