EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000035403 (Gene tree)
Gene ID: 103042112
Gene Symbol: mrpl20
Alias: wu:fa27e09|zgc:153312
Full Name: mitochondrial ribosomal protein L20
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 2232 bases
Position: chr22:18211536-18213767
Accession: 103042112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000045422	Ribosomal_L20	PF00453.18	1.7e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046995	-	426	XM_022682522	ENSAMXP00000045422	141 (aa)	XP_022538243	-

Gene Model

Click here to download ENSAMXG00000035403's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035403's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035403	mrpl20	84	70.588	ENSG00000242485	MRPL20	86	75.439	Homo_sapiens
ENSAMXG00000035403	mrpl20	99	68.243	ENSAPOG00000011835	mrpl20	99	68.243	Acanthochromis_polyacanthus
ENSAMXG00000035403	mrpl20	87	68.293	ENSAMEG00000013932	MRPL20	83	68.293	Ailuropoda_melanoleuca
ENSAMXG00000035403	mrpl20	99	66.216	ENSACIG00000019179	mrpl20	99	66.216	Amphilophus_citrinellus
ENSAMXG00000035403	mrpl20	99	68.919	ENSAOCG00000007734	mrpl20	99	68.919	Amphiprion_ocellaris
ENSAMXG00000035403	mrpl20	99	68.243	ENSAPEG00000014049	mrpl20	99	68.243	Amphiprion_percula
ENSAMXG00000035403	mrpl20	99	67.568	ENSATEG00000007369	mrpl20	99	67.568	Anabas_testudineus
ENSAMXG00000035403	mrpl20	88	59.677	ENSACAG00000009143	MRPL20	83	59.677	Anolis_carolinensis
ENSAMXG00000035403	mrpl20	84	63.866	ENSANAG00000021078	-	78	63.866	Aotus_nancymaae
ENSAMXG00000035403	mrpl20	86	79.339	ENSACLG00000021726	mrpl20	78	79.339	Astatotilapia_calliptera
ENSAMXG00000035403	mrpl20	84	66.387	ENSBTAG00000004872	MRPL20	60	66.387	Bos_taurus
ENSAMXG00000035403	mrpl20	84	67.227	ENSCJAG00000039231	-	80	67.227	Callithrix_jacchus
ENSAMXG00000035403	mrpl20	87	68.293	ENSCAFG00000019259	MRPL20	83	68.293	Canis_familiaris
ENSAMXG00000035403	mrpl20	77	65.138	ENSCAFG00020025880	-	63	65.138	Canis_lupus_dingo
ENSAMXG00000035403	mrpl20	84	65.546	ENSCHIG00000010545	MRPL20	80	65.546	Capra_hircus
ENSAMXG00000035403	mrpl20	84	69.748	ENSTSYG00000033620	MRPL20	80	69.748	Carlito_syrichta
ENSAMXG00000035403	mrpl20	84	67.227	ENSCPOG00000023001	MRPL20	80	67.227	Cavia_porcellus
ENSAMXG00000035403	mrpl20	84	67.227	ENSCCAG00000032768	-	80	67.227	Cebus_capucinus
ENSAMXG00000035403	mrpl20	81	53.509	ENSCATG00000040437	-	59	53.509	Cercocebus_atys
ENSAMXG00000035403	mrpl20	84	68.908	ENSCATG00000033927	MRPL20	80	68.908	Cercocebus_atys
ENSAMXG00000035403	mrpl20	97	43.262	ENSCLAG00000011866	-	93	43.262	Chinchilla_lanigera
ENSAMXG00000035403	mrpl20	84	68.067	ENSCLAG00000009757	-	80	68.067	Chinchilla_lanigera
ENSAMXG00000035403	mrpl20	84	68.908	ENSCSAG00000000688	-	80	68.908	Chlorocebus_sabaeus
ENSAMXG00000035403	mrpl20	92	64.179	ENSCSAG00000019479	-	90	64.179	Chlorocebus_sabaeus
ENSAMXG00000035403	mrpl20	84	67.227	ENSCPBG00000022905	MRPL20	80	67.227	Chrysemys_picta_bellii
ENSAMXG00000035403	mrpl20	68	60.417	ENSCANG00000039625	MRPL20	71	60.417	Colobus_angolensis_palliatus
ENSAMXG00000035403	mrpl20	84	67.227	ENSCGRG00001024028	Mrpl20	80	67.227	Cricetulus_griseus_chok1gshd
ENSAMXG00000035403	mrpl20	84	67.227	ENSCGRG00000007447	Mrpl20	80	67.227	Cricetulus_griseus_crigri
ENSAMXG00000035403	mrpl20	96	66.667	ENSCSEG00000002016	mrpl20	84	66.667	Cynoglossus_semilaevis
ENSAMXG00000035403	mrpl20	96	65.278	ENSCVAG00000022768	mrpl20	97	65.278	Cyprinodon_variegatus
ENSAMXG00000035403	mrpl20	99	67.568	ENSDARG00000090462	mrpl20	99	67.568	Danio_rerio
ENSAMXG00000035403	mrpl20	84	67.227	ENSDNOG00000044958	MRPL20	80	67.227	Dasypus_novemcinctus
ENSAMXG00000035403	mrpl20	57	66.667	ENSDORG00000028591	Mrpl20	98	66.667	Dipodomys_ordii
ENSAMXG00000035403	mrpl20	70	42.000	FBgn0036335	mRpL20	67	42.000	Drosophila_melanogaster
ENSAMXG00000035403	mrpl20	84	52.941	ENSETEG00000012315	MRPL20	80	52.941	Echinops_telfairi
ENSAMXG00000035403	mrpl20	84	61.345	ENSEBUG00000002214	mrpl20	80	61.345	Eptatretus_burgeri
ENSAMXG00000035403	mrpl20	84	68.908	ENSEASG00005014515	MRPL20	80	68.908	Equus_asinus_asinus
ENSAMXG00000035403	mrpl20	84	68.908	ENSECAG00000018364	MRPL20	80	68.908	Equus_caballus
ENSAMXG00000035403	mrpl20	84	50.847	ENSEEUG00000004596	-	98	50.847	Erinaceus_europaeus
ENSAMXG00000035403	mrpl20	99	68.919	ENSELUG00000013398	mrpl20	99	68.919	Esox_lucius
ENSAMXG00000035403	mrpl20	87	68.293	ENSFCAG00000033203	MRPL20	83	68.293	Felis_catus
ENSAMXG00000035403	mrpl20	87	66.393	ENSFALG00000009334	MRPL20	82	66.393	Ficedula_albicollis
ENSAMXG00000035403	mrpl20	84	66.387	ENSFDAG00000013320	MRPL20	80	66.387	Fukomys_damarensis
ENSAMXG00000035403	mrpl20	96	68.056	ENSFHEG00000004769	mrpl20	97	68.056	Fundulus_heteroclitus
ENSAMXG00000035403	mrpl20	96	67.133	ENSGMOG00000008125	mrpl20	99	67.133	Gadus_morhua
ENSAMXG00000035403	mrpl20	84	67.797	ENSGALG00000001542	MRPL20	79	67.797	Gallus_gallus
ENSAMXG00000035403	mrpl20	96	67.361	ENSGAFG00000021580	mrpl20	97	67.361	Gambusia_affinis
ENSAMXG00000035403	mrpl20	99	66.892	ENSGACG00000001134	mrpl20	99	66.892	Gasterosteus_aculeatus
ENSAMXG00000035403	mrpl20	87	65.854	ENSGAGG00000001945	MRPL20	83	65.854	Gopherus_agassizii
ENSAMXG00000035403	mrpl20	84	70.588	ENSGGOG00000027251	-	80	70.588	Gorilla_gorilla
ENSAMXG00000035403	mrpl20	99	67.568	ENSHBUG00000023626	mrpl20	99	67.568	Haplochromis_burtoni
ENSAMXG00000035403	mrpl20	96	56.429	ENSHGLG00000017538	MRPL20	94	56.429	Heterocephalus_glaber_female
ENSAMXG00000035403	mrpl20	96	57.143	ENSHGLG00100012816	MRPL20	94	57.143	Heterocephalus_glaber_male
ENSAMXG00000035403	mrpl20	86	66.942	ENSHCOG00000005830	mrpl20	80	66.942	Hippocampus_comes
ENSAMXG00000035403	mrpl20	99	72.297	ENSIPUG00000018055	mrpl20	99	72.297	Ictalurus_punctatus
ENSAMXG00000035403	mrpl20	84	67.227	ENSJJAG00000020728	Mrpl20	80	67.227	Jaculus_jaculus
ENSAMXG00000035403	mrpl20	99	64.189	ENSKMAG00000021650	mrpl20	99	64.189	Kryptolebias_marmoratus
ENSAMXG00000035403	mrpl20	99	66.216	ENSLBEG00000021562	mrpl20	99	66.216	Labrus_bergylta
ENSAMXG00000035403	mrpl20	84	72.269	ENSLACG00000019149	MRPL20	80	72.269	Latimeria_chalumnae
ENSAMXG00000035403	mrpl20	84	66.387	ENSLAFG00000010706	MRPL20	80	66.387	Loxodonta_africana
ENSAMXG00000035403	mrpl20	84	68.908	ENSMFAG00000043214	MRPL20	80	68.908	Macaca_fascicularis
ENSAMXG00000035403	mrpl20	85	53.333	ENSMFAG00000046195	-	71	53.333	Macaca_fascicularis
ENSAMXG00000035403	mrpl20	84	68.908	ENSMNEG00000041891	MRPL20	80	68.908	Macaca_nemestrina
ENSAMXG00000035403	mrpl20	81	55.263	ENSMNEG00000000027	-	58	55.263	Macaca_nemestrina
ENSAMXG00000035403	mrpl20	86	51.240	ENSMLEG00000037605	-	74	51.240	Mandrillus_leucophaeus
ENSAMXG00000035403	mrpl20	84	68.644	ENSMLEG00000037086	MRPL20	98	68.644	Mandrillus_leucophaeus
ENSAMXG00000035403	mrpl20	99	67.568	ENSMAMG00000023884	mrpl20	99	67.568	Mastacembelus_armatus
ENSAMXG00000035403	mrpl20	99	67.568	ENSMZEG00005011376	mrpl20	99	67.568	Maylandia_zebra
ENSAMXG00000035403	mrpl20	94	61.654	ENSMGAG00000002774	MRPL20	89	61.654	Meleagris_gallopavo
ENSAMXG00000035403	mrpl20	84	67.227	ENSMAUG00000013299	Mrpl20	80	67.227	Mesocricetus_auratus
ENSAMXG00000035403	mrpl20	84	69.748	ENSMICG00000041892	MRPL20	80	69.748	Microcebus_murinus
ENSAMXG00000035403	mrpl20	84	63.025	ENSMOCG00000009545	-	80	63.025	Microtus_ochrogaster
ENSAMXG00000035403	mrpl20	84	67.227	ENSMOCG00000000404	-	80	67.227	Microtus_ochrogaster
ENSAMXG00000035403	mrpl20	59	78.313	ENSMMOG00000021753	mrpl20	74	78.313	Mola_mola
ENSAMXG00000035403	mrpl20	89	62.400	ENSMODG00000006562	MRPL20	84	62.400	Monodelphis_domestica
ENSAMXG00000035403	mrpl20	99	64.189	ENSMALG00000018593	mrpl20	99	64.189	Monopterus_albus
ENSAMXG00000035403	mrpl20	84	68.067	MGP_CAROLIEiJ_G0026904	Mrpl20	80	68.067	Mus_caroli
ENSAMXG00000035403	mrpl20	84	68.908	ENSMUSG00000029066	Mrpl20	80	68.908	Mus_musculus
ENSAMXG00000035403	mrpl20	84	64.706	MGP_PahariEiJ_G0029252	Mrpl20	80	64.706	Mus_pahari
ENSAMXG00000035403	mrpl20	84	68.908	MGP_SPRETEiJ_G0027898	Mrpl20	80	68.908	Mus_spretus
ENSAMXG00000035403	mrpl20	84	67.227	ENSMLUG00000011857	MRPL20	80	67.227	Myotis_lucifugus
ENSAMXG00000035403	mrpl20	84	65.254	ENSNGAG00000021688	Mrpl20	79	65.254	Nannospalax_galili
ENSAMXG00000035403	mrpl20	99	67.568	ENSNBRG00000006018	mrpl20	99	67.568	Neolamprologus_brichardi
ENSAMXG00000035403	mrpl20	57	67.901	ENSNLEG00000013868	-	79	67.901	Nomascus_leucogenys
ENSAMXG00000035403	mrpl20	84	67.227	ENSODEG00000010734	MRPL20	80	67.227	Octodon_degus
ENSAMXG00000035403	mrpl20	99	68.243	ENSONIG00000018914	mrpl20	99	68.243	Oreochromis_niloticus
ENSAMXG00000035403	mrpl20	86	79.339	ENSORLG00000018304	mrpl20	81	79.339	Oryzias_latipes
ENSAMXG00000035403	mrpl20	86	79.339	ENSORLG00020009128	mrpl20	81	79.339	Oryzias_latipes_hni
ENSAMXG00000035403	mrpl20	86	79.339	ENSORLG00015005156	mrpl20	81	79.339	Oryzias_latipes_hsok
ENSAMXG00000035403	mrpl20	86	81.818	ENSOMEG00000015654	mrpl20	81	81.818	Oryzias_melastigma
ENSAMXG00000035403	mrpl20	84	68.908	ENSOGAG00000005968	MRPL20	80	68.908	Otolemur_garnettii
ENSAMXG00000035403	mrpl20	84	65.546	ENSOARG00000003529	MRPL20	80	65.546	Ovis_aries
ENSAMXG00000035403	mrpl20	84	70.588	ENSPPAG00000042350	-	80	70.588	Pan_paniscus
ENSAMXG00000035403	mrpl20	87	69.106	ENSPPRG00000009188	MRPL20	83	69.106	Panthera_pardus
ENSAMXG00000035403	mrpl20	57	67.901	ENSPTIG00000020769	MRPL20	89	67.901	Panthera_tigris_altaica
ENSAMXG00000035403	mrpl20	84	70.588	ENSPTRG00000000029	MRPL20	80	70.588	Pan_troglodytes
ENSAMXG00000035403	mrpl20	83	52.137	ENSPANG00000036197	-	83	52.137	Papio_anubis
ENSAMXG00000035403	mrpl20	84	68.908	ENSPANG00000015802	MRPL20	80	68.908	Papio_anubis
ENSAMXG00000035403	mrpl20	98	63.699	ENSPKIG00000002248	mrpl20	98	63.699	Paramormyrops_kingsleyae
ENSAMXG00000035403	mrpl20	82	67.826	ENSPSIG00000003939	MRPL20	81	67.826	Pelodiscus_sinensis
ENSAMXG00000035403	mrpl20	99	69.595	ENSPMGG00000003966	mrpl20	99	69.595	Periophthalmus_magnuspinnatus
ENSAMXG00000035403	mrpl20	51	37.838	ENSPMGG00000022271	-	52	37.838	Periophthalmus_magnuspinnatus
ENSAMXG00000035403	mrpl20	84	47.899	ENSPEMG00000009458	-	65	47.899	Peromyscus_maniculatus_bairdii
ENSAMXG00000035403	mrpl20	61	48.837	ENSPMAG00000009990	-	68	48.837	Petromyzon_marinus
ENSAMXG00000035403	mrpl20	89	63.200	ENSPCIG00000007747	MRPL20	84	63.200	Phascolarctos_cinereus
ENSAMXG00000035403	mrpl20	96	66.667	ENSPFOG00000018163	mrpl20	97	66.667	Poecilia_formosa
ENSAMXG00000035403	mrpl20	96	66.667	ENSPLAG00000016451	mrpl20	97	66.667	Poecilia_latipinna
ENSAMXG00000035403	mrpl20	96	66.667	ENSPMEG00000002561	mrpl20	97	66.667	Poecilia_mexicana
ENSAMXG00000035403	mrpl20	96	59.310	ENSPREG00000004925	mrpl20	97	60.000	Poecilia_reticulata
ENSAMXG00000035403	mrpl20	84	69.748	ENSPCAG00000001425	MRPL20	80	69.748	Procavia_capensis
ENSAMXG00000035403	mrpl20	84	69.748	ENSPCOG00000025653	-	80	69.748	Propithecus_coquereli
ENSAMXG00000035403	mrpl20	84	66.387	ENSPCOG00000004450	-	83	66.387	Propithecus_coquereli
ENSAMXG00000035403	mrpl20	99	67.568	ENSPNYG00000008626	mrpl20	99	67.568	Pundamilia_nyererei
ENSAMXG00000035403	mrpl20	99	72.973	ENSPNAG00000016694	mrpl20	99	72.973	Pygocentrus_nattereri
ENSAMXG00000035403	mrpl20	84	67.797	ENSRNOG00000018647	Mrpl20	79	67.797	Rattus_norvegicus
ENSAMXG00000035403	mrpl20	84	68.908	ENSRBIG00000042278	MRPL20	80	68.908	Rhinopithecus_bieti
ENSAMXG00000035403	mrpl20	84	68.908	ENSRROG00000003574	MRPL20	80	68.908	Rhinopithecus_roxellana
ENSAMXG00000035403	mrpl20	57	61.728	ENSSBOG00000035454	-	98	61.728	Saimiri_boliviensis_boliviensis
ENSAMXG00000035403	mrpl20	89	55.725	ENSSHAG00000008197	MRPL20	85	55.725	Sarcophilus_harrisii
ENSAMXG00000035403	mrpl20	84	73.109	ENSSFOG00015016009	mrpl20	80	73.109	Scleropages_formosus
ENSAMXG00000035403	mrpl20	99	67.568	ENSSMAG00000000214	mrpl20	99	67.568	Scophthalmus_maximus
ENSAMXG00000035403	mrpl20	86	79.339	ENSSDUG00000008646	mrpl20	81	79.339	Seriola_dumerili
ENSAMXG00000035403	mrpl20	86	80.992	ENSSLDG00000023171	mrpl20	81	80.992	Seriola_lalandi_dorsalis
ENSAMXG00000035403	mrpl20	87	62.295	ENSSPUG00000016911	MRPL20	82	62.295	Sphenodon_punctatus
ENSAMXG00000035403	mrpl20	99	69.595	ENSSPAG00000012887	mrpl20	99	69.595	Stegastes_partitus
ENSAMXG00000035403	mrpl20	84	68.067	ENSSSCG00000033374	MRPL20	80	68.067	Sus_scrofa
ENSAMXG00000035403	mrpl20	84	64.407	ENSTGUG00000003113	MRPL20	96	64.407	Taeniopygia_guttata
ENSAMXG00000035403	mrpl20	96	65.972	ENSTRUG00000021410	mrpl20	97	65.972	Takifugu_rubripes
ENSAMXG00000035403	mrpl20	96	66.667	ENSTNIG00000014657	mrpl20	97	66.667	Tetraodon_nigroviridis
ENSAMXG00000035403	mrpl20	84	68.908	ENSTBEG00000008735	MRPL20	80	68.908	Tupaia_belangeri
ENSAMXG00000035403	mrpl20	84	66.949	ENSTTRG00000017046	MRPL20	98	66.949	Tursiops_truncatus
ENSAMXG00000035403	mrpl20	83	51.282	ENSUAMG00000028406	-	75	51.282	Ursus_americanus
ENSAMXG00000035403	mrpl20	87	69.106	ENSUAMG00000012829	-	83	69.106	Ursus_americanus
ENSAMXG00000035403	mrpl20	57	67.901	ENSUMAG00000001917	-	71	67.901	Ursus_maritimus
ENSAMXG00000035403	mrpl20	83	50.427	ENSUMAG00000003240	-	75	50.427	Ursus_maritimus
ENSAMXG00000035403	mrpl20	57	65.432	ENSVPAG00000001846	-	98	65.432	Vicugna_pacos
ENSAMXG00000035403	mrpl20	87	68.293	ENSVVUG00000004455	MRPL20	83	68.293	Vulpes_vulpes
ENSAMXG00000035403	mrpl20	84	66.387	ENSXETG00000011118	mrpl20	80	66.387	Xenopus_tropicalis
ENSAMXG00000035403	mrpl20	96	65.278	ENSXCOG00000004220	mrpl20	97	65.278	Xiphophorus_couchianus
ENSAMXG00000035403	mrpl20	96	65.278	ENSXMAG00000016652	mrpl20	97	65.278	Xiphophorus_maculatus