EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSAMXG00000035417 (Gene tree)
Gene ID: 103022685
Gene Symbol: tsn
Alias: id:ibd2900|wu:fb38b07|wu:fi31h02|zgc:123170
Full Name: translin
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 4567 bases
Position: chr19:17642708-17647274
Accession: 103022685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000038620	Translin	PF01997.16	2e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000031422	-	1074	XM_007253481	ENSAMXP00000038620	227 (aa)	XP_007253543	UPI000BBD622E

Gene Model

Click here to download ENSAMXG00000035417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035417	tsn	99	78.125	ENSG00000211460	TSN	98	78.125	Homo_sapiens
ENSAMXG00000035417	tsn	100	89.427	ENSAPOG00000002063	tsn	100	89.427	Acanthochromis_polyacanthus
ENSAMXG00000035417	tsn	99	77.679	ENSAMEG00000005055	TSN	98	77.679	Ailuropoda_melanoleuca
ENSAMXG00000035417	tsn	100	90.749	ENSACIG00000021694	tsn	100	90.749	Amphilophus_citrinellus
ENSAMXG00000035417	tsn	100	89.427	ENSAOCG00000015574	tsn	100	89.427	Amphiprion_ocellaris
ENSAMXG00000035417	tsn	100	89.427	ENSAPEG00000001677	tsn	100	89.427	Amphiprion_percula
ENSAMXG00000035417	tsn	100	88.987	ENSATEG00000004115	tsn	100	88.987	Anabas_testudineus
ENSAMXG00000035417	tsn	59	31.373	ENSAPLG00000013433	-	53	31.373	Anas_platyrhynchos
ENSAMXG00000035417	tsn	94	76.256	ENSACAG00000004757	TSN	99	76.256	Anolis_carolinensis
ENSAMXG00000035417	tsn	100	77.632	ENSANAG00000026842	TSN	100	77.632	Aotus_nancymaae
ENSAMXG00000035417	tsn	100	88.987	ENSACLG00000020831	tsn	100	88.987	Astatotilapia_calliptera
ENSAMXG00000035417	tsn	99	77.679	ENSBTAG00000006059	TSN	98	77.679	Bos_taurus
ENSAMXG00000035417	tsn	100	77.632	ENSCJAG00000044533	-	99	79.208	Callithrix_jacchus
ENSAMXG00000035417	tsn	100	77.632	ENSCJAG00000047222	-	100	77.632	Callithrix_jacchus
ENSAMXG00000035417	tsn	50	64.602	ENSCJAG00000008511	-	88	64.602	Callithrix_jacchus
ENSAMXG00000035417	tsn	99	77.679	ENSCAFG00000004700	TSN	93	77.679	Canis_familiaris
ENSAMXG00000035417	tsn	99	77.679	ENSCAFG00020011747	TSN	98	77.679	Canis_lupus_dingo
ENSAMXG00000035417	tsn	99	77.679	ENSCHIG00000010715	TSN	98	77.679	Capra_hircus
ENSAMXG00000035417	tsn	59	30.519	ENSTSYG00000026820	-	53	30.519	Carlito_syrichta
ENSAMXG00000035417	tsn	99	78.125	ENSTSYG00000004395	TSN	98	78.125	Carlito_syrichta
ENSAMXG00000035417	tsn	96	61.991	ENSCAPG00000015595	TSN	88	61.991	Cavia_aperea
ENSAMXG00000035417	tsn	99	78.125	ENSCPOG00000035645	TSN	98	78.125	Cavia_porcellus
ENSAMXG00000035417	tsn	100	77.193	ENSCCAG00000026371	TSN	100	77.193	Cebus_capucinus
ENSAMXG00000035417	tsn	67	63.158	ENSCCAG00000034886	-	84	63.158	Cebus_capucinus
ENSAMXG00000035417	tsn	99	78.125	ENSCATG00000032155	TSN	98	78.125	Cercocebus_atys
ENSAMXG00000035417	tsn	99	78.125	ENSCLAG00000006171	TSN	98	78.125	Chinchilla_lanigera
ENSAMXG00000035417	tsn	99	78.125	ENSCSAG00000016712	TSN	98	78.125	Chlorocebus_sabaeus
ENSAMXG00000035417	tsn	97	65.158	ENSCPBG00000018116	-	96	65.158	Chrysemys_picta_bellii
ENSAMXG00000035417	tsn	67	70.861	ENSCPBG00000013741	-	80	70.861	Chrysemys_picta_bellii
ENSAMXG00000035417	tsn	96	48.165	ENSCING00000012612	-	100	48.165	Ciona_intestinalis
ENSAMXG00000035417	tsn	98	46.188	ENSCSAVG00000009485	-	99	46.188	Ciona_savignyi
ENSAMXG00000035417	tsn	99	78.125	ENSCANG00000041881	TSN	98	78.125	Colobus_angolensis_palliatus
ENSAMXG00000035417	tsn	100	78.070	ENSCGRG00001018233	Tsn	100	78.070	Cricetulus_griseus_chok1gshd
ENSAMXG00000035417	tsn	100	78.070	ENSCGRG00000008331	Tsn	100	78.070	Cricetulus_griseus_crigri
ENSAMXG00000035417	tsn	100	84.141	ENSCSEG00000005825	tsn	100	84.141	Cynoglossus_semilaevis
ENSAMXG00000035417	tsn	99	79.295	ENSCVAG00000022024	tsn	100	80.176	Cyprinodon_variegatus
ENSAMXG00000035417	tsn	100	90.749	ENSDARG00000041830	tsn	100	90.749	Danio_rerio
ENSAMXG00000035417	tsn	99	77.679	ENSDNOG00000025740	TSN	98	77.679	Dasypus_novemcinctus
ENSAMXG00000035417	tsn	59	30.519	ENSDORG00000013537	Tsnax	58	30.519	Dipodomys_ordii
ENSAMXG00000035417	tsn	99	78.125	ENSDORG00000026251	-	98	78.125	Dipodomys_ordii
ENSAMXG00000035417	tsn	95	53.241	FBgn0033528	trsn	91	53.241	Drosophila_melanogaster
ENSAMXG00000035417	tsn	99	77.679	ENSEASG00005004774	TSN	98	77.679	Equus_asinus_asinus
ENSAMXG00000035417	tsn	99	77.679	ENSECAG00000015930	TSN	98	77.679	Equus_caballus
ENSAMXG00000035417	tsn	75	80.000	ENSEEUG00000013935	TSN	98	80.000	Erinaceus_europaeus
ENSAMXG00000035417	tsn	100	88.987	ENSELUG00000007669	tsn	100	88.987	Esox_lucius
ENSAMXG00000035417	tsn	70	62.264	ENSFCAG00000022306	-	90	62.264	Felis_catus
ENSAMXG00000035417	tsn	99	77.679	ENSFCAG00000027149	TSN	98	77.679	Felis_catus
ENSAMXG00000035417	tsn	91	77.033	ENSFALG00000013247	TSN	96	74.208	Ficedula_albicollis
ENSAMXG00000035417	tsn	99	78.125	ENSFDAG00000012302	TSN	98	78.125	Fukomys_damarensis
ENSAMXG00000035417	tsn	100	88.546	ENSFHEG00000015531	tsn	100	88.546	Fundulus_heteroclitus
ENSAMXG00000035417	tsn	99	84.513	ENSGMOG00000009247	tsn	100	84.513	Gadus_morhua
ENSAMXG00000035417	tsn	59	31.373	ENSGALG00000037177	TSNAX	53	31.373	Gallus_gallus
ENSAMXG00000035417	tsn	100	77.293	ENSGALG00000011652	TSN	100	77.293	Gallus_gallus
ENSAMXG00000035417	tsn	100	88.106	ENSGAFG00000003816	tsn	100	88.106	Gambusia_affinis
ENSAMXG00000035417	tsn	100	87.665	ENSGACG00000000235	tsn	98	87.665	Gasterosteus_aculeatus
ENSAMXG00000035417	tsn	99	78.125	ENSGGOG00000002216	TSN	97	79.803	Gorilla_gorilla
ENSAMXG00000035417	tsn	100	88.987	ENSHBUG00000002340	tsn	85	88.987	Haplochromis_burtoni
ENSAMXG00000035417	tsn	99	78.125	ENSHGLG00000007038	TSN	98	78.125	Heterocephalus_glaber_female
ENSAMXG00000035417	tsn	99	78.125	ENSHGLG00100000069	TSN	98	78.125	Heterocephalus_glaber_male
ENSAMXG00000035417	tsn	98	86.099	ENSHCOG00000001756	tsn	99	86.099	Hippocampus_comes
ENSAMXG00000035417	tsn	100	90.308	ENSIPUG00000021370	tsn	100	90.308	Ictalurus_punctatus
ENSAMXG00000035417	tsn	99	78.125	ENSSTOG00000000972	TSN	98	78.125	Ictidomys_tridecemlineatus
ENSAMXG00000035417	tsn	59	30.519	ENSJJAG00000000228	-	54	30.519	Jaculus_jaculus
ENSAMXG00000035417	tsn	99	78.125	ENSJJAG00000006730	Tsn	98	78.125	Jaculus_jaculus
ENSAMXG00000035417	tsn	100	89.868	ENSKMAG00000004996	tsn	100	89.868	Kryptolebias_marmoratus
ENSAMXG00000035417	tsn	100	87.665	ENSLBEG00000012620	tsn	100	87.665	Labrus_bergylta
ENSAMXG00000035417	tsn	100	62.174	ENSLACG00000005246	TSN	100	62.174	Latimeria_chalumnae
ENSAMXG00000035417	tsn	100	84.716	ENSLOCG00000002191	tsn	99	84.716	Lepisosteus_oculatus
ENSAMXG00000035417	tsn	99	72.768	ENSLAFG00000032428	TSN	98	72.768	Loxodonta_africana
ENSAMXG00000035417	tsn	99	78.125	ENSMFAG00000044217	TSN	98	78.125	Macaca_fascicularis
ENSAMXG00000035417	tsn	99	78.125	ENSMMUG00000021119	TSN	98	78.125	Macaca_mulatta
ENSAMXG00000035417	tsn	99	78.125	ENSMNEG00000040632	TSN	98	78.125	Macaca_nemestrina
ENSAMXG00000035417	tsn	56	71.654	ENSMLEG00000038656	TSN	98	71.654	Mandrillus_leucophaeus
ENSAMXG00000035417	tsn	100	86.344	ENSMAMG00000019536	tsn	100	86.344	Mastacembelus_armatus
ENSAMXG00000035417	tsn	100	88.987	ENSMZEG00005018715	tsn	85	88.987	Maylandia_zebra
ENSAMXG00000035417	tsn	77	77.966	ENSMGAG00000011956	TSN	90	77.966	Meleagris_gallopavo
ENSAMXG00000035417	tsn	100	74.123	ENSMAUG00000018800	Tsn	100	80.097	Mesocricetus_auratus
ENSAMXG00000035417	tsn	99	78.125	ENSMICG00000015793	TSN	98	78.125	Microcebus_murinus
ENSAMXG00000035417	tsn	99	78.667	ENSMOCG00000013248	Tsn	99	78.667	Microtus_ochrogaster
ENSAMXG00000035417	tsn	90	87.805	ENSMMOG00000019661	tsn	100	87.805	Mola_mola
ENSAMXG00000035417	tsn	97	76.018	ENSMODG00000000147	TSN	98	75.111	Monodelphis_domestica
ENSAMXG00000035417	tsn	100	89.427	ENSMALG00000001827	tsn	100	89.427	Monopterus_albus
ENSAMXG00000035417	tsn	100	78.509	ENSMUSG00000026374	Tsn	100	78.509	Mus_musculus
ENSAMXG00000035417	tsn	100	78.509	MGP_PahariEiJ_G0027742	Tsn	100	78.509	Mus_pahari
ENSAMXG00000035417	tsn	100	78.509	MGP_SPRETEiJ_G0015313	Tsn	100	78.509	Mus_spretus
ENSAMXG00000035417	tsn	99	77.679	ENSMPUG00000001056	TSN	98	77.679	Mustela_putorius_furo
ENSAMXG00000035417	tsn	54	30.496	ENSMLUG00000028551	-	83	30.496	Myotis_lucifugus
ENSAMXG00000035417	tsn	89	79.703	ENSMLUG00000012656	TSN	98	79.703	Myotis_lucifugus
ENSAMXG00000035417	tsn	100	77.632	ENSNGAG00000010353	Tsn	100	77.632	Nannospalax_galili
ENSAMXG00000035417	tsn	100	89.427	ENSNBRG00000001193	tsn	100	89.427	Neolamprologus_brichardi
ENSAMXG00000035417	tsn	99	78.125	ENSNLEG00000032773	TSN	98	78.125	Nomascus_leucogenys
ENSAMXG00000035417	tsn	99	55.804	ENSMEUG00000006228	TSN	98	55.804	Notamacropus_eugenii
ENSAMXG00000035417	tsn	62	67.376	ENSOPRG00000004858	-	100	67.376	Ochotona_princeps
ENSAMXG00000035417	tsn	99	61.161	ENSODEG00000005998	-	98	61.161	Octodon_degus
ENSAMXG00000035417	tsn	99	78.125	ENSODEG00000008386	-	98	78.125	Octodon_degus
ENSAMXG00000035417	tsn	100	89.427	ENSONIG00000017060	tsn	100	89.427	Oreochromis_niloticus
ENSAMXG00000035417	tsn	88	79.397	ENSOANG00000003457	TSN	98	78.325	Ornithorhynchus_anatinus
ENSAMXG00000035417	tsn	99	77.778	ENSOCUG00000023529	TSN	99	77.778	Oryctolagus_cuniculus
ENSAMXG00000035417	tsn	100	88.106	ENSORLG00000010049	tsn	100	88.106	Oryzias_latipes
ENSAMXG00000035417	tsn	100	88.106	ENSORLG00020016476	tsn	100	88.106	Oryzias_latipes_hni
ENSAMXG00000035417	tsn	63	83.333	ENSORLG00020017000	-	84	83.333	Oryzias_latipes_hni
ENSAMXG00000035417	tsn	100	88.546	ENSORLG00015019192	tsn	100	88.546	Oryzias_latipes_hsok
ENSAMXG00000035417	tsn	100	88.546	ENSOMEG00000016335	tsn	100	88.546	Oryzias_melastigma
ENSAMXG00000035417	tsn	99	78.125	ENSOGAG00000030436	TSN	98	78.125	Otolemur_garnettii
ENSAMXG00000035417	tsn	99	77.679	ENSOARG00000013339	TSN	98	77.679	Ovis_aries
ENSAMXG00000035417	tsn	99	78.125	ENSPPAG00000032878	TSN	98	78.125	Pan_paniscus
ENSAMXG00000035417	tsn	81	60.109	ENSPPRG00000004174	-	77	60.109	Panthera_pardus
ENSAMXG00000035417	tsn	99	77.679	ENSPPRG00000006531	TSN	98	77.679	Panthera_pardus
ENSAMXG00000035417	tsn	56	69.048	ENSPTIG00000012953	TSN	88	67.176	Panthera_tigris_altaica
ENSAMXG00000035417	tsn	99	78.125	ENSPTRG00000012420	TSN	98	78.125	Pan_troglodytes
ENSAMXG00000035417	tsn	99	78.125	ENSPANG00000000733	TSN	98	78.125	Papio_anubis
ENSAMXG00000035417	tsn	100	87.225	ENSPKIG00000002005	tsn	100	87.225	Paramormyrops_kingsleyae
ENSAMXG00000035417	tsn	77	78.857	ENSPSIG00000006064	TSN	96	78.857	Pelodiscus_sinensis
ENSAMXG00000035417	tsn	100	87.225	ENSPMGG00000015287	tsn	100	87.225	Periophthalmus_magnuspinnatus
ENSAMXG00000035417	tsn	99	66.814	ENSPMAG00000009161	tsn	97	66.814	Petromyzon_marinus
ENSAMXG00000035417	tsn	89	79.310	ENSPCIG00000023491	TSN	98	79.208	Phascolarctos_cinereus
ENSAMXG00000035417	tsn	100	88.987	ENSPFOG00000016063	tsn	100	88.987	Poecilia_formosa
ENSAMXG00000035417	tsn	100	88.987	ENSPLAG00000010654	tsn	100	88.987	Poecilia_latipinna
ENSAMXG00000035417	tsn	100	89.427	ENSPMEG00000023570	tsn	100	89.427	Poecilia_mexicana
ENSAMXG00000035417	tsn	100	88.987	ENSPREG00000003481	tsn	100	88.987	Poecilia_reticulata
ENSAMXG00000035417	tsn	99	78.125	ENSPPYG00000012774	TSN	98	78.125	Pongo_abelii
ENSAMXG00000035417	tsn	75	79.412	ENSPCAG00000003549	TSN	98	79.412	Procavia_capensis
ENSAMXG00000035417	tsn	59	31.373	ENSPCOG00000028517	-	53	31.373	Propithecus_coquereli
ENSAMXG00000035417	tsn	99	78.125	ENSPCOG00000011045	TSN	98	78.125	Propithecus_coquereli
ENSAMXG00000035417	tsn	99	77.679	ENSPVAG00000016702	TSN	98	77.679	Pteropus_vampyrus
ENSAMXG00000035417	tsn	100	88.987	ENSPNYG00000012396	tsn	85	88.987	Pundamilia_nyererei
ENSAMXG00000035417	tsn	100	94.273	ENSPNAG00000018140	tsn	100	94.273	Pygocentrus_nattereri
ENSAMXG00000035417	tsn	100	78.070	ENSRNOG00000002319	Tsn	100	78.070	Rattus_norvegicus
ENSAMXG00000035417	tsn	99	78.125	ENSRBIG00000041316	TSN	98	78.125	Rhinopithecus_bieti
ENSAMXG00000035417	tsn	99	78.125	ENSRROG00000029954	TSN	98	78.125	Rhinopithecus_roxellana
ENSAMXG00000035417	tsn	100	77.632	ENSSBOG00000028579	TSN	100	77.632	Saimiri_boliviensis_boliviensis
ENSAMXG00000035417	tsn	84	61.053	ENSSBOG00000015719	-	94	61.053	Saimiri_boliviensis_boliviensis
ENSAMXG00000035417	tsn	99	77.232	ENSSHAG00000011707	TSN	98	77.232	Sarcophilus_harrisii
ENSAMXG00000035417	tsn	100	86.784	ENSSFOG00015020668	tsn	100	86.784	Scleropages_formosus
ENSAMXG00000035417	tsn	100	86.784	ENSSMAG00000005822	tsn	100	86.784	Scophthalmus_maximus
ENSAMXG00000035417	tsn	100	90.308	ENSSDUG00000011388	tsn	100	90.308	Seriola_dumerili
ENSAMXG00000035417	tsn	100	90.308	ENSSLDG00000008206	tsn	100	90.308	Seriola_lalandi_dorsalis
ENSAMXG00000035417	tsn	100	52.193	ENSSARG00000007193	-	100	52.193	Sorex_araneus
ENSAMXG00000035417	tsn	100	75.877	ENSSPUG00000017518	TSN	100	75.877	Sphenodon_punctatus
ENSAMXG00000035417	tsn	100	90.308	ENSSPAG00000009283	tsn	100	90.308	Stegastes_partitus
ENSAMXG00000035417	tsn	99	77.679	ENSSSCG00000015729	TSN	98	79.703	Sus_scrofa
ENSAMXG00000035417	tsn	99	75.893	ENSTGUG00000004445	TSN	98	75.893	Taeniopygia_guttata
ENSAMXG00000035417	tsn	98	85.650	ENSTRUG00000013691	tsn	99	85.650	Takifugu_rubripes
ENSAMXG00000035417	tsn	100	85.903	ENSTNIG00000015707	tsn	100	85.903	Tetraodon_nigroviridis
ENSAMXG00000035417	tsn	99	78.125	ENSTBEG00000015319	TSN	98	78.125	Tupaia_belangeri
ENSAMXG00000035417	tsn	99	77.679	ENSTTRG00000005854	TSN	98	77.679	Tursiops_truncatus
ENSAMXG00000035417	tsn	99	77.679	ENSUAMG00000021618	TSN	98	77.679	Ursus_americanus
ENSAMXG00000035417	tsn	99	76.339	ENSUMAG00000008516	TSN	98	76.339	Ursus_maritimus
ENSAMXG00000035417	tsn	57	59.690	ENSVPAG00000009874	-	100	59.690	Vicugna_pacos
ENSAMXG00000035417	tsn	89	79.703	ENSVVUG00000027555	TSN	97	79.703	Vulpes_vulpes
ENSAMXG00000035417	tsn	98	74.439	ENSXETG00000000838	tsn	98	74.439	Xenopus_tropicalis
ENSAMXG00000035417	tsn	55	81.600	ENSXCOG00000018514	tsn	95	81.600	Xiphophorus_couchianus
ENSAMXG00000035417	tsn	100	88.546	ENSXMAG00000022538	tsn	100	88.546	Xiphophorus_maculatus