EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035523 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1608 bases
Position: chr3:21799221-21800828
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000048298	RVT_1	PF00078.27	3.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000057234	-	1608	-	ENSAMXP00000048298	535 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000035523's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035523's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035523	-	72	59.184	ENSAMXG00000039759	-	89	59.184

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035523	-	58	41.083	ENSAPEG00000022045	-	87	41.083	Amphiprion_percula
ENSAMXG00000035523	-	51	45.091	ENSATEG00000002616	-	70	45.091	Anabas_testudineus
ENSAMXG00000035523	-	56	44.147	ENSATEG00000001648	-	68	44.147	Anabas_testudineus
ENSAMXG00000035523	-	50	43.123	ENSATEG00000012596	-	65	43.123	Anabas_testudineus
ENSAMXG00000035523	-	54	38.983	ENSBTAG00000050818	-	79	38.983	Bos_taurus
ENSAMXG00000035523	-	56	39.933	ENSELUG00000000455	-	96	39.933	Esox_lucius
ENSAMXG00000035523	-	54	35.690	ENSFDAG00000018675	-	70	35.690	Fukomys_damarensis
ENSAMXG00000035523	-	72	38.363	ENSHBUG00000019642	-	99	38.363	Haplochromis_burtoni
ENSAMXG00000035523	-	52	37.943	ENSIPUG00000008898	-	69	37.943	Ictalurus_punctatus
ENSAMXG00000035523	-	51	37.226	ENSIPUG00000004466	-	72	37.226	Ictalurus_punctatus
ENSAMXG00000035523	-	50	36.900	ENSLBEG00000014732	-	59	36.900	Labrus_bergylta
ENSAMXG00000035523	-	59	42.508	ENSMMUG00000048335	-	64	42.508	Macaca_mulatta
ENSAMXG00000035523	-	55	46.259	ENSMAMG00000007988	-	64	46.259	Mastacembelus_armatus
ENSAMXG00000035523	-	55	46.259	ENSMAMG00000017258	-	71	46.259	Mastacembelus_armatus
ENSAMXG00000035523	-	76	44.787	ENSMAMG00000013736	-	89	44.787	Mastacembelus_armatus
ENSAMXG00000035523	-	55	46.259	ENSMAMG00000005141	-	73	46.259	Mastacembelus_armatus
ENSAMXG00000035523	-	55	46.259	ENSMAMG00000006839	-	53	46.259	Mastacembelus_armatus
ENSAMXG00000035523	-	52	44.211	ENSMODG00000029165	-	83	44.211	Monodelphis_domestica
ENSAMXG00000035523	-	55	43.854	ENSMODG00000028171	-	70	43.854	Monodelphis_domestica
ENSAMXG00000035523	-	55	44.850	ENSMODG00000029572	-	61	44.850	Monodelphis_domestica
ENSAMXG00000035523	-	55	44.186	ENSMODG00000029588	-	75	44.186	Monodelphis_domestica
ENSAMXG00000035523	-	50	38.406	ENSMODG00000029150	-	69	38.406	Monodelphis_domestica
ENSAMXG00000035523	-	55	44.186	ENSMODG00000029390	-	50	44.186	Monodelphis_domestica
ENSAMXG00000035523	-	54	43.537	ENSMODG00000029538	-	76	43.537	Monodelphis_domestica
ENSAMXG00000035523	-	55	44.186	ENSMODG00000027965	-	69	44.186	Monodelphis_domestica
ENSAMXG00000035523	-	55	44.518	ENSMODG00000027715	-	80	44.518	Monodelphis_domestica
ENSAMXG00000035523	-	52	44.366	ENSMODG00000028946	-	76	44.366	Monodelphis_domestica
ENSAMXG00000035523	-	50	42.647	ENSMODG00000028332	-	58	42.647	Monodelphis_domestica
ENSAMXG00000035523	-	51	44.086	ENSMODG00000028270	-	75	44.086	Monodelphis_domestica
ENSAMXG00000035523	-	55	44.518	ENSMODG00000028146	-	60	44.518	Monodelphis_domestica
ENSAMXG00000035523	-	59	39.009	ENSMALG00000008425	-	97	39.009	Monopterus_albus
ENSAMXG00000035523	-	57	34.069	ENSMALG00000008335	-	96	34.069	Monopterus_albus
ENSAMXG00000035523	-	56	53.094	ENSOMEG00000012804	-	92	53.094	Oryzias_melastigma
ENSAMXG00000035523	-	85	34.979	ENSOMEG00000000207	-	74	34.979	Oryzias_melastigma
ENSAMXG00000035523	-	55	43.686	ENSOMEG00000000861	-	61	43.686	Oryzias_melastigma
ENSAMXG00000035523	-	86	35.669	ENSPKIG00000002864	-	84	32.620	Paramormyrops_kingsleyae
ENSAMXG00000035523	-	51	47.826	ENSPSIG00000000051	-	77	47.826	Pelodiscus_sinensis
ENSAMXG00000035523	-	57	31.290	ENSPMGG00000024049	-	93	31.290	Periophthalmus_magnuspinnatus
ENSAMXG00000035523	-	56	41.946	ENSPNAG00000003082	-	97	41.946	Pygocentrus_nattereri
ENSAMXG00000035523	-	70	39.062	ENSSLDG00000020897	-	99	39.062	Seriola_lalandi_dorsalis
ENSAMXG00000035523	-	82	30.901	ENSSLDG00000003339	-	91	30.901	Seriola_lalandi_dorsalis