EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035526 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1086 bases
Position: chrAPWO02000745.1:27518-28603
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000042622	MMR_HSR1	PF01926.23	4.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000033861	-	765	-	ENSAMXP00000042622	254 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000035526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035526's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035526	-	75	69.811	ENSAMXG00000035963	-	97	47.619
ENSAMXG00000035526	-	75	44.167	ENSAMXG00000038000	-	96	44.167
ENSAMXG00000035526	-	80	48.763	ENSAMXG00000036554	-	94	50.746
ENSAMXG00000035526	-	57	35.057	ENSAMXG00000032381	-	66	32.456

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035526	-	65	39.037	ENSACIG00000012714	-	63	39.037	Amphilophus_citrinellus
ENSAMXG00000035526	-	51	40.741	ENSATEG00000011594	-	56	40.741	Anabas_testudineus
ENSAMXG00000035526	-	68	38.333	ENSCVAG00000013717	-	79	38.333	Cyprinodon_variegatus
ENSAMXG00000035526	-	54	42.675	ENSCVAG00000000429	-	50	42.675	Cyprinodon_variegatus
ENSAMXG00000035526	-	54	42.767	ENSGAFG00000017534	-	53	42.767	Gambusia_affinis
ENSAMXG00000035526	-	50	43.182	ENSLBEG00000013074	-	54	43.182	Labrus_bergylta
ENSAMXG00000035526	-	50	44.275	ENSLBEG00000022860	-	54	44.275	Labrus_bergylta
ENSAMXG00000035526	-	54	41.772	ENSMZEG00005026689	-	55	41.772	Maylandia_zebra
ENSAMXG00000035526	-	65	37.433	ENSMZEG00005026687	-	62	37.433	Maylandia_zebra
ENSAMXG00000035526	-	54	40.506	ENSMZEG00005024949	-	50	40.506	Maylandia_zebra
ENSAMXG00000035526	-	65	37.433	ENSMZEG00005027520	-	68	37.433	Maylandia_zebra
ENSAMXG00000035526	-	76	34.536	ENSNBRG00000002181	-	66	34.536	Neolamprologus_brichardi
ENSAMXG00000035526	-	54	39.490	ENSONIG00000000440	-	56	39.490	Oreochromis_niloticus
ENSAMXG00000035526	-	60	43.605	ENSONIG00000013605	-	66	42.614	Oreochromis_niloticus
ENSAMXG00000035526	-	70	46.341	ENSONIG00000009177	-	55	53.333	Oreochromis_niloticus
ENSAMXG00000035526	-	50	31.757	ENSPKIG00000003832	-	53	31.757	Paramormyrops_kingsleyae
ENSAMXG00000035526	-	54	43.671	ENSPREG00000015263	-	75	43.671	Poecilia_reticulata
ENSAMXG00000035526	-	54	44.025	ENSPREG00000015367	-	65	42.500	Poecilia_reticulata
ENSAMXG00000035526	-	58	39.073	ENSPREG00000017019	-	67	39.073	Poecilia_reticulata
ENSAMXG00000035526	-	54	41.772	ENSPNYG00000020928	-	53	41.772	Pundamilia_nyererei
ENSAMXG00000035526	-	65	42.012	ENSPNYG00000013308	-	52	41.420	Pundamilia_nyererei
ENSAMXG00000035526	-	60	30.857	ENSPNAG00000025993	-	53	30.857	Pygocentrus_nattereri
ENSAMXG00000035526	-	60	40.571	ENSSPAG00000013918	-	58	40.571	Stegastes_partitus
ENSAMXG00000035526	-	60	39.080	ENSSPAG00000013831	-	54	57.317	Stegastes_partitus
ENSAMXG00000035526	-	59	41.176	ENSXMAG00000028084	-	52	41.176	Xiphophorus_maculatus