EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035618 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 1408 bases
Position: chr13:18878821-18880228
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000043007	Exo_endo_phos	PF03372.23	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000039066	-	1408	-	ENSAMXP00000043007	458 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000035618's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035618's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035618	-	84	31.051	ENSAMXG00000029153	-	81	31.051
ENSAMXG00000035618	-	96	95.227	ENSAMXG00000034279	-	80	95.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035618	-	63	31.683	ENSAPOG00000018624	-	51	31.683	Acanthochromis_polyacanthus
ENSAMXG00000035618	-	79	32.552	ENSACLG00000004686	-	90	32.552	Astatotilapia_calliptera
ENSAMXG00000035618	-	53	32.129	ENSGMOG00000012912	-	98	32.129	Gadus_morhua
ENSAMXG00000035618	-	74	62.537	ENSIPUG00000012540	-	77	62.537	Ictalurus_punctatus
ENSAMXG00000035618	-	70	58.438	ENSIPUG00000013055	-	63	58.438	Ictalurus_punctatus
ENSAMXG00000035618	-	83	30.077	ENSLACG00000004055	-	55	30.077	Latimeria_chalumnae
ENSAMXG00000035618	-	55	38.077	ENSORLG00015003248	-	54	38.077	Oryzias_latipes_hsok
ENSAMXG00000035618	-	64	56.122	ENSSFOG00015018010	-	58	56.122	Scleropages_formosus