EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035647 (Gene tree)
Gene ID: 103045656
Gene Symbol: si:dkey-240h12.4
Alias: -
Full Name: death-associated protein kinase 2-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Minus strand
Length: 32815 bases
Position: chr17:17075058-17107872
Accession: 103045656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000010468	RIO1	PF01163.22	2.1e-05	1	1
ENSAMXP00000039228	RIO1	PF01163.22	2.3e-05	1	1
ENSAMXP00000052507	RIO1	PF01163.22	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000030385	-	6015	XM_022679114	ENSAMXP00000052507	360 (aa)	XP_022534835	UPI000BBDE3F2
ENSAMXT00000051549	-	6516	XM_022679115	ENSAMXP00000039228	360 (aa)	XP_022534836	UPI000BBDE3F2
ENSAMXT00000010468	-	1056	-	ENSAMXP00000010468	351 (aa)	-	W5KSA6

Gene Model

Click here to download ENSAMXG00000035647's gene model file

Pathways

Pathway ID	Pathway Name	Source
amex04140	Autophagy - animal	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035647's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035647	si:dkey-240h12.4	88	38.801	ENSAMXG00000031117	camk1ga	71	38.801
ENSAMXG00000035647	si:dkey-240h12.4	78	58.363	ENSAMXG00000040439	-	62	58.363
ENSAMXG00000035647	si:dkey-240h12.4	99	52.044	ENSAMXG00000038379	dapk2b	99	52.044
ENSAMXG00000035647	si:dkey-240h12.4	77	52.536	ENSAMXG00000010743	dapk2a	56	53.184
ENSAMXG00000035647	si:dkey-240h12.4	88	53.481	ENSAMXG00000012193	dapk1	90	55.135
ENSAMXG00000035647	si:dkey-240h12.4	80	30.945	ENSAMXG00000009127	rps6ka4	73	30.945
ENSAMXG00000035647	si:dkey-240h12.4	79	32.404	ENSAMXG00000003794	chek2	54	32.404
ENSAMXG00000035647	si:dkey-240h12.4	77	34.507	ENSAMXG00000015364	stk33	58	34.507
ENSAMXG00000035647	si:dkey-240h12.4	90	36.000	ENSAMXG00000001286	camk1gb	68	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035647	si:dkey-240h12.4	67	69.710	ENSACAG00000005337	-	97	68.775	Anolis_carolinensis
ENSAMXG00000035647	si:dkey-240h12.4	97	76.857	ENSDARG00000034210	si:dkey-240h12.4	100	77.285	Danio_rerio
ENSAMXG00000035647	si:dkey-240h12.4	52	67.027	ENSFHEG00000017947	si:dkey-240h12.4	92	67.027	Fundulus_heteroclitus
ENSAMXG00000035647	si:dkey-240h12.4	97	72.779	ENSLBEG00000000182	-	100	73.333	Labrus_bergylta
ENSAMXG00000035647	si:dkey-240h12.4	100	65.097	ENSLACG00000015056	si:dkey-240h12.4	99	65.097	Latimeria_chalumnae
ENSAMXG00000035647	si:dkey-240h12.4	97	79.487	ENSPKIG00000015179	si:dkey-240h12.4	100	79.778	Paramormyrops_kingsleyae
ENSAMXG00000035647	si:dkey-240h12.4	97	70.571	ENSPFOG00000016522	si:dkey-240h12.4	100	71.191	Poecilia_formosa
ENSAMXG00000035647	si:dkey-240h12.4	87	71.795	ENSPLAG00000002519	si:dkey-240h12.4	99	71.795	Poecilia_latipinna
ENSAMXG00000035647	si:dkey-240h12.4	100	94.167	ENSPNAG00000010456	-	100	94.167	Pygocentrus_nattereri
ENSAMXG00000035647	si:dkey-240h12.4	97	80.286	ENSSFOG00015020846	si:dkey-240h12.4	100	80.609	Scleropages_formosus
ENSAMXG00000035647	si:dkey-240h12.4	97	54.054	ENSSPUG00000001082	-	93	54.054	Sphenodon_punctatus