EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035650 (Gene tree)
Gene ID: 103025578
Gene Symbol: -
Alias: -
Full Name: nuclear GTPase SLIP-GC-like
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 46911 bases
Position: chr3:1294623-1341533
Accession: 103025578
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000051073	MMR_HSR1	PF01926.23	1.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000052021	-	4483	XM_022678744	ENSAMXP00000053091	740 (aa)	XP_022534465	-
ENSAMXT00000042476	-	4989	-	ENSAMXP00000051073	704 (aa)	-	-
ENSAMXT00000038092	-	2289	-	ENSAMXP00000044567	672 (aa)	-	-
ENSAMXT00000037396	-	4513	-	ENSAMXP00000045683	750 (aa)	-	-
ENSAMXT00000035792	-	4614	XM_022678737	ENSAMXP00000053241	761 (aa)	XP_022534458	UPI000BBD7BB5

Gene Model

Click here to download ENSAMXG00000035650's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035650's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035650	-	96	85.355	ENSAMXG00000007315	-	90	85.355

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035650	-	75	39.858	ENSAPEG00000007463	-	79	40.036	Amphiprion_percula
ENSAMXG00000035650	-	99	40.282	ENSAPEG00000008962	-	87	40.282	Amphiprion_percula
ENSAMXG00000035650	-	99	40.000	ENSAPEG00000007405	-	84	40.000	Amphiprion_percula
ENSAMXG00000035650	-	95	40.146	ENSATEG00000024350	-	95	40.565	Anabas_testudineus
ENSAMXG00000035650	-	88	37.402	ENSACLG00000027785	-	99	36.130	Astatotilapia_calliptera
ENSAMXG00000035650	-	96	38.026	ENSACLG00000027781	-	79	38.171	Astatotilapia_calliptera
ENSAMXG00000035650	-	67	39.076	ENSACLG00000009378	-	86	39.203	Astatotilapia_calliptera
ENSAMXG00000035650	-	97	35.857	ENSACLG00000027749	-	97	35.857	Astatotilapia_calliptera
ENSAMXG00000035650	-	99	38.592	ENSACLG00000027743	-	83	38.592	Astatotilapia_calliptera
ENSAMXG00000035650	-	99	38.277	ENSACLG00000027770	-	87	38.277	Astatotilapia_calliptera
ENSAMXG00000035650	-	96	38.102	ENSACLG00000027763	-	85	38.102	Astatotilapia_calliptera
ENSAMXG00000035650	-	91	40.483	ENSELUG00000016154	-	74	40.483	Esox_lucius
ENSAMXG00000035650	-	97	41.084	ENSELUG00000016238	-	72	41.084	Esox_lucius
ENSAMXG00000035650	-	99	39.916	ENSELUG00000016324	-	81	39.916	Esox_lucius
ENSAMXG00000035650	-	73	39.851	ENSGACG00000011412	-	80	40.223	Gasterosteus_aculeatus
ENSAMXG00000035650	-	85	38.825	ENSLBEG00000025738	-	97	38.825	Labrus_bergylta
ENSAMXG00000035650	-	93	34.928	ENSLBEG00000027088	-	96	35.072	Labrus_bergylta
ENSAMXG00000035650	-	95	36.788	ENSLOCG00000002868	-	98	36.788	Lepisosteus_oculatus
ENSAMXG00000035650	-	57	40.976	ENSMAMG00000023343	-	64	41.707	Mastacembelus_armatus
ENSAMXG00000035650	-	97	37.213	ENSMZEG00005023437	-	98	37.213	Maylandia_zebra
ENSAMXG00000035650	-	98	38.156	ENSMZEG00005023434	-	79	38.156	Maylandia_zebra
ENSAMXG00000035650	-	99	39.100	ENSMZEG00005004230	-	80	39.100	Maylandia_zebra
ENSAMXG00000035650	-	99	37.394	ENSMZEG00005004202	-	92	37.482	Maylandia_zebra
ENSAMXG00000035650	-	99	36.096	ENSMZEG00005023384	-	81	36.096	Maylandia_zebra
ENSAMXG00000035650	-	97	37.446	ENSMZEG00005026592	-	98	37.733	Maylandia_zebra
ENSAMXG00000035650	-	99	38.277	ENSMZEG00005023374	-	88	38.277	Maylandia_zebra
ENSAMXG00000035650	-	72	34.468	ENSMAUG00000014486	Nuggc	73	34.468	Mesocricetus_auratus
ENSAMXG00000035650	-	87	34.720	ENSONIG00000015367	-	99	34.720	Oreochromis_niloticus
ENSAMXG00000035650	-	99	37.063	ENSONIG00000005156	-	99	39.246	Oreochromis_niloticus
ENSAMXG00000035650	-	86	36.150	ENSONIG00000012332	-	99	36.150	Oreochromis_niloticus
ENSAMXG00000035650	-	89	39.408	ENSONIG00000017112	-	98	39.564	Oreochromis_niloticus
ENSAMXG00000035650	-	99	36.769	ENSPFOG00000006073	-	83	36.769	Poecilia_formosa
ENSAMXG00000035650	-	99	35.823	ENSPLAG00000016480	-	83	35.961	Poecilia_latipinna
ENSAMXG00000035650	-	93	36.283	ENSPMEG00000014636	-	98	36.283	Poecilia_mexicana
ENSAMXG00000035650	-	80	39.583	ENSPREG00000007347	-	94	39.896	Poecilia_reticulata
ENSAMXG00000035650	-	75	39.299	ENSPREG00000009634	-	80	39.483	Poecilia_reticulata
ENSAMXG00000035650	-	96	38.205	ENSPNYG00000002532	-	85	38.205	Pundamilia_nyererei
ENSAMXG00000035650	-	99	59.859	ENSPNAG00000003204	-	95	59.859	Pygocentrus_nattereri
ENSAMXG00000035650	-	98	35.342	ENSSFOG00015023994	-	77	35.342	Scleropages_formosus
ENSAMXG00000035650	-	99	36.606	ENSSMAG00000015947	nuggc.3	80	37.393	Scophthalmus_maximus
ENSAMXG00000035650	-	67	39.370	ENSSDUG00000010293	-	76	39.370	Seriola_dumerili
ENSAMXG00000035650	-	99	36.216	ENSSPAG00000013498	-	93	36.216	Stegastes_partitus
ENSAMXG00000035650	-	93	40.148	ENSSPAG00000014020	-	82	40.296	Stegastes_partitus