EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSAMXG00000035718 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astyanax_mexicanus
Status: putative
Strand: Plus strand
Length: 4618 bases
Position: chr7:16384999-16389616
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSAMXP00000027231	RVT_1	PF00078.27	5.9e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSAMXT00000046127	-	1566	-	ENSAMXP00000027231	521 (aa)	-	-

Gene Model

Click here to download ENSAMXG00000035718's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSAMXG00000035718's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSAMXG00000035718	-	88	39.556	ENSAMXG00000033384	-	78	39.556
ENSAMXG00000035718	-	83	30.490	ENSAMXG00000042337	-	52	30.490
ENSAMXG00000035718	-	73	47.716	ENSAMXG00000032036	-	55	46.489
ENSAMXG00000035718	-	81	42.630	ENSAMXG00000038901	-	92	42.630

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSAMXG00000035718	-	54	30.450	ENSAPOG00000015742	-	90	30.450	Acanthochromis_polyacanthus
ENSAMXG00000035718	-	68	46.348	ENSACIG00000020849	-	85	46.348	Amphilophus_citrinellus
ENSAMXG00000035718	-	64	30.357	ENSACIG00000010538	-	87	30.357	Amphilophus_citrinellus
ENSAMXG00000035718	-	72	49.202	ENSACIG00000020856	-	81	49.202	Amphilophus_citrinellus
ENSAMXG00000035718	-	62	35.258	ENSAOCG00000000894	-	97	34.954	Amphiprion_ocellaris
ENSAMXG00000035718	-	50	30.483	ENSAOCG00000012592	-	63	30.483	Amphiprion_ocellaris
ENSAMXG00000035718	-	60	47.319	ENSATEG00000019721	-	82	47.319	Anabas_testudineus
ENSAMXG00000035718	-	63	32.500	ENSACAG00000010816	-	99	32.500	Anolis_carolinensis
ENSAMXG00000035718	-	58	31.475	ENSACLG00000012857	-	82	31.475	Astatotilapia_calliptera
ENSAMXG00000035718	-	69	32.782	ENSACLG00000011319	-	95	32.782	Astatotilapia_calliptera
ENSAMXG00000035718	-	77	30.569	ENSACLG00000011312	-	62	30.569	Astatotilapia_calliptera
ENSAMXG00000035718	-	85	30.932	ENSACLG00000011463	-	56	30.932	Astatotilapia_calliptera
ENSAMXG00000035718	-	64	30.398	ENSACLG00000003896	-	63	30.398	Astatotilapia_calliptera
ENSAMXG00000035718	-	64	31.609	ENSCVAG00000018360	-	81	31.609	Cyprinodon_variegatus
ENSAMXG00000035718	-	73	30.788	ENSDARG00000086420	CABZ01046949.1	51	30.788	Danio_rerio
ENSAMXG00000035718	-	52	37.226	ENSELUG00000000386	-	60	37.226	Esox_lucius
ENSAMXG00000035718	-	75	31.204	ENSELUG00000002589	-	86	31.204	Esox_lucius
ENSAMXG00000035718	-	62	30.247	ENSGAGG00000013921	-	87	30.247	Gopherus_agassizii
ENSAMXG00000035718	-	58	33.876	ENSHBUG00000011715	-	78	33.876	Haplochromis_burtoni
ENSAMXG00000035718	-	71	39.247	ENSHBUG00000003796	-	83	38.619	Haplochromis_burtoni
ENSAMXG00000035718	-	78	30.896	ENSHBUG00000020853	-	56	30.896	Haplochromis_burtoni
ENSAMXG00000035718	-	51	46.643	ENSIPUG00000012946	-	98	46.643	Ictalurus_punctatus
ENSAMXG00000035718	-	64	30.383	ENSKMAG00000014393	-	79	30.383	Kryptolebias_marmoratus
ENSAMXG00000035718	-	55	35.640	ENSLBEG00000020242	-	78	35.640	Labrus_bergylta
ENSAMXG00000035718	-	54	30.851	ENSLBEG00000023714	-	74	30.851	Labrus_bergylta
ENSAMXG00000035718	-	74	32.506	ENSLACG00000022265	-	52	32.506	Latimeria_chalumnae
ENSAMXG00000035718	-	69	30.601	ENSLOCG00000000179	-	55	30.601	Lepisosteus_oculatus
ENSAMXG00000035718	-	69	32.782	ENSMZEG00005025877	-	85	32.782	Maylandia_zebra
ENSAMXG00000035718	-	50	32.955	ENSMZEG00005016362	-	92	32.955	Maylandia_zebra
ENSAMXG00000035718	-	69	32.782	ENSMZEG00005008304	-	85	32.782	Maylandia_zebra
ENSAMXG00000035718	-	61	49.051	ENSNBRG00000001934	-	68	49.051	Neolamprologus_brichardi
ENSAMXG00000035718	-	64	50.149	ENSNBRG00000022130	-	80	50.149	Neolamprologus_brichardi
ENSAMXG00000035718	-	82	30.044	ENSORLG00000028313	-	53	30.044	Oryzias_latipes
ENSAMXG00000035718	-	58	30.645	ENSORLG00000028454	-	97	30.645	Oryzias_latipes
ENSAMXG00000035718	-	73	30.673	ENSORLG00000023575	-	50	30.673	Oryzias_latipes
ENSAMXG00000035718	-	74	31.281	ENSORLG00000028706	-	81	31.281	Oryzias_latipes
ENSAMXG00000035718	-	63	30.499	ENSORLG00000023713	-	85	30.499	Oryzias_latipes
ENSAMXG00000035718	-	67	30.141	ENSORLG00000024236	-	92	30.141	Oryzias_latipes
ENSAMXG00000035718	-	73	30.673	ENSORLG00000025260	-	51	30.673	Oryzias_latipes
ENSAMXG00000035718	-	66	31.421	ENSORLG00020007779	-	97	31.421	Oryzias_latipes_hni
ENSAMXG00000035718	-	67	31.707	ENSORLG00020018629	-	97	31.707	Oryzias_latipes_hni
ENSAMXG00000035718	-	57	33.333	ENSORLG00020014149	-	93	33.333	Oryzias_latipes_hni
ENSAMXG00000035718	-	52	32.491	ENSORLG00015022393	-	91	32.491	Oryzias_latipes_hsok
ENSAMXG00000035718	-	73	30.827	ENSORLG00015015728	-	50	30.827	Oryzias_latipes_hsok
ENSAMXG00000035718	-	73	31.078	ENSORLG00015006862	-	50	31.078	Oryzias_latipes_hsok
ENSAMXG00000035718	-	61	32.298	ENSORLG00015020895	-	85	32.298	Oryzias_latipes_hsok
ENSAMXG00000035718	-	69	31.662	ENSORLG00015007703	-	97	31.662	Oryzias_latipes_hsok
ENSAMXG00000035718	-	53	30.851	ENSPKIG00000013511	-	96	30.851	Paramormyrops_kingsleyae
ENSAMXG00000035718	-	63	34.441	ENSPLAG00000015080	-	79	34.441	Poecilia_latipinna
ENSAMXG00000035718	-	58	32.209	ENSPMEG00000004673	-	82	32.209	Poecilia_mexicana
ENSAMXG00000035718	-	63	30.994	ENSPREG00000001352	-	94	30.994	Poecilia_reticulata
ENSAMXG00000035718	-	72	32.283	ENSPREG00000010319	-	91	32.283	Poecilia_reticulata
ENSAMXG00000035718	-	62	33.028	ENSPREG00000004933	-	82	33.028	Poecilia_reticulata
ENSAMXG00000035718	-	65	48.387	ENSPNYG00000002652	-	88	48.387	Pundamilia_nyererei
ENSAMXG00000035718	-	54	34.035	ENSPNYG00000002466	-	93	34.035	Pundamilia_nyererei
ENSAMXG00000035718	-	55	32.180	ENSPNAG00000002786	-	70	32.180	Pygocentrus_nattereri
ENSAMXG00000035718	-	73	30.348	ENSPNAG00000014375	-	97	30.348	Pygocentrus_nattereri
ENSAMXG00000035718	-	62	30.887	ENSPNAG00000024749	-	75	30.887	Pygocentrus_nattereri
ENSAMXG00000035718	-	57	34.437	ENSSDUG00000015364	-	64	34.437	Seriola_dumerili
ENSAMXG00000035718	-	54	33.101	ENSSDUG00000021791	-	94	33.101	Seriola_dumerili
ENSAMXG00000035718	-	90	30.233	ENSXETG00000030860	-	64	30.233	Xenopus_tropicalis
ENSAMXG00000035718	-	84	31.928	ENSXETG00000034134	-	59	31.928	Xenopus_tropicalis
ENSAMXG00000035718	-	50	36.122	ENSXCOG00000016894	-	77	36.122	Xiphophorus_couchianus
ENSAMXG00000035718	-	64	32.335	ENSXMAG00000023211	-	74	32.335	Xiphophorus_maculatus
ENSAMXG00000035718	-	53	33.449	ENSXMAG00000026184	-	94	33.449	Xiphophorus_maculatus